RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 AQRO60306 1485 aaKnown RBP eCLIP19.49■□□□□ 0.71
CACNA1A-219ENST00000635917 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
CACNA1A-219ENST00000635917 HRCP23327 699 aa19.47■□□□□ 0.71
CACNA1A-219ENST00000635917 ADAMTS12P58397 1594 aa19.45■□□□□ 0.7
CACNA1A-219ENST00000635917 GRIN2BQ13224 1484 aa19.45■□□□□ 0.7
CACNA1A-219ENST00000635917 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
CACNA1A-219ENST00000635917 EIF4G3O43432 1585 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-219ENST00000635917 EFCAB5A4FU69 1503 aa19.4■□□□□ 0.7
CACNA1A-219ENST00000635917 SAMD9Q5K651 1589 aa19.35■□□□□ 0.69
CACNA1A-219ENST00000635917 TTBK1Q5TCY1 1321 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-219ENST00000635917 MAP3K1Q13233 1512 aa19.32■□□□□ 0.68
CACNA1A-219ENST00000635917 APLP2Q06481 763 aa19.31■□□□□ 0.68
CACNA1A-219ENST00000635917 SNAPC4Q5SXM2 1469 aa19.3■□□□□ 0.68
CACNA1A-219ENST00000635917 FHOD3Q2V2M9 1422 aa19.3■□□□□ 0.68
CACNA1A-219ENST00000635917 KANK4Q5T7N3 995 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-219ENST00000635917 PCF11O94913 1555 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-219ENST00000635917 TIAM1Q13009 1591 aa19.27■□□□□ 0.68
CACNA1A-219ENST00000635917 MAGI1Q96QZ7 1491 aaPredicted RBP19.26■□□□□ 0.67
CACNA1A-219ENST00000635917 IQGAP2Q13576 1575 aa19.26■□□□□ 0.67
CACNA1A-219ENST00000635917 CFAP43Q8NDM7 1665 aa19.24■□□□□ 0.67
CACNA1A-219ENST00000635917 GRIN2AQ12879 1464 aa19.23■□□□□ 0.67
CACNA1A-219ENST00000635917 FYCO1Q9BQS8 1478 aa19.23■□□□□ 0.67
CACNA1A-219ENST00000635917 P3H3Q8IVL6 736 aa19.23■□□□□ 0.67
CACNA1A-219ENST00000635917 CASKIN1Q8WXD9 1431 aa19.22■□□□□ 0.67
CACNA1A-219ENST00000635917 FMN1Q68DA7 1419 aa19.2■□□□□ 0.66
CACNA1A-219ENST00000635917 UGGT2Q9NYU1 1516 aa19.2■□□□□ 0.66
CACNA1A-219ENST00000635917 SYNJ2O15056 1496 aa19.19■□□□□ 0.66
CACNA1A-219ENST00000635917 KIAA0586Q9BVV6 1533 aa19.19■□□□□ 0.66
CACNA1A-219ENST00000635917 LRRC9Q6ZRR7 1453 aa19.17■□□□□ 0.66
CACNA1A-219ENST00000635917 LRRIQ1Q96JM4 1722 aa19.16■□□□□ 0.66
CACNA1A-219ENST00000635917 RRBP1Q9P2E9 1410 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-219ENST00000635917 CEP170Q5SW79 1584 aa19.14■□□□□ 0.65
CACNA1A-219ENST00000635917 NUP160Q12769 1436 aa19.11■□□□□ 0.65
CACNA1A-219ENST00000635917 DISP1Q96F81 1524 aa19.1■□□□□ 0.65
CACNA1A-219ENST00000635917 KIAA0556O60303 1618 aa19.08■□□□□ 0.64
CACNA1A-219ENST00000635917 ZEB1P37275 1124 aaPredicted RBP19.06■□□□□ 0.64
CACNA1A-219ENST00000635917 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
CACNA1A-219ENST00000635917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-219ENST00000635917 PHLDB1Q86UU1 1377 aa19.01■□□□□ 0.63
CACNA1A-219ENST00000635917 CCNB3Q8WWL7 1395 aa19.01■□□□□ 0.63
CACNA1A-219ENST00000635917 HECW1Q76N89 1606 aa18.99■□□□□ 0.63
CACNA1A-219ENST00000635917 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-219ENST00000635917 ATP1B4Q9UN42 357 aaPredicted RBP18.97■□□□□ 0.63
CACNA1A-219ENST00000635917 CCDC18Q5T9S5 1454 aa18.97■□□□□ 0.63
CACNA1A-219ENST00000635917 CHD1O14646 1710 aa18.97■□□□□ 0.63
CACNA1A-219ENST00000635917 MAGI3Q5TCQ9 1506 aa18.95■□□□□ 0.62
CACNA1A-219ENST00000635917 FBLN2P98095 1184 aa18.95■□□□□ 0.62
CACNA1A-219ENST00000635917 EPRSP07814 1512 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-219ENST00000635917 EHBP1L1Q8N3D4 1523 aa18.93■□□□□ 0.62
CACNA1A-219ENST00000635917 CCER1Q8TC90 406 aaPredicted RBP18.93■□□□□ 0.62
CACNA1A-219ENST00000635917 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
CACNA1A-219ENST00000635917 JPH4Q96JJ6 628 aa18.92■□□□□ 0.62
CACNA1A-219ENST00000635917 RAPGEF6Q8TEU7 1601 aa18.91■□□□□ 0.62
CACNA1A-219ENST00000635917 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
CACNA1A-219ENST00000635917 SUPT6HQ7KZ85 1726 aaKnown RBP18.89■□□□□ 0.62
CACNA1A-219ENST00000635917 NUP153P49790 1475 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-219ENST00000635917 CDK13Q14004 1512 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-219ENST00000635917 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.88■□□□□ 0.61
CACNA1A-219ENST00000635917 NCOA2Q15596 1464 aa18.87■□□□□ 0.61
CACNA1A-219ENST00000635917 CARMIL2Q6F5E8 1435 aa18.87■□□□□ 0.61
CACNA1A-219ENST00000635917 SHROOM2Q13796 1616 aa18.85■□□□□ 0.61
CACNA1A-219ENST00000635917 FGD6Q6ZV73 1430 aa18.85■□□□□ 0.61
CACNA1A-219ENST00000635917 PLB1Q6P1J6 1458 aa18.82■□□□□ 0.6
CACNA1A-219ENST00000635917 MYOM3Q5VTT5 1437 aa18.82■□□□□ 0.6
CACNA1A-219ENST00000635917 ABCA8O94911 1581 aa18.8■□□□□ 0.6
CACNA1A-219ENST00000635917 PRG4Q92954 1404 aaPredicted RBP18.77■□□□□ 0.6
CACNA1A-219ENST00000635917 CLASP1Q7Z460 1538 aa18.76■□□□□ 0.59
CACNA1A-219ENST00000635917 DHX57Q6P158 1386 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-219ENST00000635917 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
CACNA1A-219ENST00000635917 TCOF1Q13428 1488 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-219ENST00000635917 FAM50AQ14320 339 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-219ENST00000635917 ITGAEP38570 1179 aa18.71■□□□□ 0.59
CACNA1A-219ENST00000635917 ADCY10Q96PN6 1610 aa18.7■□□□□ 0.58
CACNA1A-219ENST00000635917 PTPRKQ15262 1439 aa18.7■□□□□ 0.58
CACNA1A-219ENST00000635917 MIA2Q96PC5 1412 aa18.7■□□□□ 0.58
CACNA1A-219ENST00000635917 RAB3GAP2Q9H2M9 1393 aa18.7■□□□□ 0.58
CACNA1A-219ENST00000635917 ARID3CA6NKF2 412 aa18.7■□□□□ 0.58
CACNA1A-219ENST00000635917 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
CACNA1A-219ENST00000635917 CLSPNQ9HAW4 1339 aa18.69■□□□□ 0.58
CACNA1A-219ENST00000635917 TROQ12816 1431 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-219ENST00000635917 ERCC6L2Q5T890 1561 aa18.68■□□□□ 0.58
CACNA1A-219ENST00000635917 ATP10BO94823 1461 aa18.67■□□□□ 0.58
CACNA1A-219ENST00000635917 PTPRGP23470 1445 aa18.67■□□□□ 0.58
CACNA1A-219ENST00000635917 CDK11AQ9UQ88 783 aaPredicted RBP18.65■□□□□ 0.58
CACNA1A-219ENST00000635917 KIF14Q15058 1648 aa18.63■□□□□ 0.57
CACNA1A-219ENST00000635917 HFM1A2PYH4 1435 aa18.61■□□□□ 0.57
CACNA1A-219ENST00000635917 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
CACNA1A-219ENST00000635917 ITSN2Q9NZM3 1697 aa18.58■□□□□ 0.57
CACNA1A-219ENST00000635917 MAPKBP1O60336 1514 aa18.58■□□□□ 0.56
CACNA1A-219ENST00000635917 ABCC10Q5T3U5 1492 aa18.57■□□□□ 0.56
CACNA1A-219ENST00000635917 GPATCH8Q9UKJ3 1502 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-219ENST00000635917 NAIPQ13075 1403 aa18.57■□□□□ 0.56
CACNA1A-219ENST00000635917 ABCC2Q92887 1545 aa18.56■□□□□ 0.56
CACNA1A-219ENST00000635917 CDC42BPAQ5VT25 1732 aa18.55■□□□□ 0.56
CACNA1A-219ENST00000635917 AKNAQ7Z591 1439 aa18.55■□□□□ 0.56
CACNA1A-219ENST00000635917 DNMT1P26358 1616 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-219ENST00000635917 GCC2Q8IWJ2 1684 aa18.54■□□□□ 0.56
CACNA1A-219ENST00000635917 PLEKHD1A6NEE1 506 aa18.51■□□□□ 0.55
CACNA1A-219ENST00000635917 UHRF1BP1LA0JNW5 1464 aa18.5■□□□□ 0.55
CACNA1A-219ENST00000635917 DAPK1P53355 1430 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms