RNA–Protein interactions for RNA: ENST00000634989.1

SMARCA2-232, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-232ENST00000634989 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
SMARCA2-232ENST00000634989 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
SMARCA2-232ENST00000634989 MNX1P50219 401 aaPredicted RBP12.81□□□□□ -0.36
SMARCA2-232ENST00000634989 EVX2Q03828 476 aa12.8□□□□□ -0.36
SMARCA2-232ENST00000634989 CFAP44Q96MT7 982 aa12.79□□□□□ -0.36
SMARCA2-232ENST00000634989 SPRYD3Q8NCJ5 442 aa12.77□□□□□ -0.37
SMARCA2-232ENST00000634989 FARP1Q9Y4F1 1045 aaPredicted RBP12.76□□□□□ -0.37
SMARCA2-232ENST00000634989 KDM2AQ9Y2K7 1162 aa12.74□□□□□ -0.37
SMARCA2-232ENST00000634989 CHGAP10645 457 aaKnown RBP12.72□□□□□ -0.37
SMARCA2-232ENST00000634989 GSE1Q14687 1217 aa12.7□□□□□ -0.38
SMARCA2-232ENST00000634989 HAX1O00165 279 aa12.67□□□□□ -0.38
SMARCA2-232ENST00000634989 HS6ST3Q8IZP7 471 aa12.66□□□□□ -0.38
SMARCA2-232ENST00000634989 TAOK2Q9UL54 1235 aa12.66□□□□□ -0.38
SMARCA2-232ENST00000634989 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
SMARCA2-232ENST00000634989 TSHZ2Q9NRE2 1034 aa12.63□□□□□ -0.39
SMARCA2-232ENST00000634989 NUBP1P53384 320 aa12.62□□□□□ -0.39
SMARCA2-232ENST00000634989 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
SMARCA2-232ENST00000634989 RNF25Q96BH1 459 aaPredicted RBP12.58□□□□□ -0.4
SMARCA2-232ENST00000634989 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
SMARCA2-232ENST00000634989 RIOK3O14730 519 aaKnown RBP12.54□□□□□ -0.4
SMARCA2-232ENST00000634989 PRKCSHP14314 528 aaPredicted RBP12.54□□□□□ -0.4
SMARCA2-232ENST00000634989 DCAF8Q5TAQ9 597 aa12.54□□□□□ -0.4
SMARCA2-232ENST00000634989 RASEFQ8IZ41 740 aa12.53□□□□□ -0.4
SMARCA2-232ENST00000634989 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
SMARCA2-232ENST00000634989 SP7Q8TDD2 431 aaPredicted RBP12.48□□□□□ -0.41
SMARCA2-232ENST00000634989 VGFO15240 615 aaPredicted RBP12.46□□□□□ -0.41
SMARCA2-232ENST00000634989 CHRM1P11229 460 aaPredicted RBP12.46□□□□□ -0.41
SMARCA2-232ENST00000634989 NISCHQ9Y2I1 1504 aa12.46□□□□□ -0.42
SMARCA2-232ENST00000634989 TPRNQ4KMQ1 711 aa12.45□□□□□ -0.42
SMARCA2-232ENST00000634989 TSPYL2Q9H2G4 693 aaPredicted RBP12.45□□□□□ -0.42
SMARCA2-232ENST00000634989 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
SMARCA2-232ENST00000634989 NKX1-1Q15270 411 aaPredicted RBP12.43□□□□□ -0.42
SMARCA2-232ENST00000634989 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
SMARCA2-232ENST00000634989 SGIP1Q9BQI5 828 aa12.42□□□□□ -0.42
SMARCA2-232ENST00000634989 STK25O00506 426 aa12.4□□□□□ -0.42
SMARCA2-232ENST00000634989 GTPBP6O43824 516 aaPredicted RBP12.39□□□□□ -0.43
SMARCA2-232ENST00000634989 NBR1Q14596 966 aa12.38□□□□□ -0.43
SMARCA2-232ENST00000634989 CCDC61Q9Y6R9 512 aa12.38□□□□□ -0.43
SMARCA2-232ENST00000634989 GABBR2O75899 941 aa12.37□□□□□ -0.43
SMARCA2-232ENST00000634989 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-232ENST00000634989 RYDENQ9NUL5 291 aaKnown RBP12.35□□□□□ -0.43
SMARCA2-232ENST00000634989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.3□□□□□ -0.44
SMARCA2-232ENST00000634989 GALR2O43603 387 aaPredicted RBP12.3□□□□□ -0.44
SMARCA2-232ENST00000634989 ZFP91Q96JP5 570 aaPredicted RBP12.3□□□□□ -0.44
SMARCA2-232ENST00000634989 BCL11BQ9C0K0 894 aaPredicted RBP12.3□□□□□ -0.44
SMARCA2-232ENST00000634989 STK24Q9Y6E0 443 aa12.29□□□□□ -0.44
SMARCA2-232ENST00000634989 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.45
SMARCA2-232ENST00000634989 PYGBP11216 843 aa12.27□□□□□ -0.45
SMARCA2-232ENST00000634989 KIF12Q96FN5 646 aa12.25□□□□□ -0.45
SMARCA2-232ENST00000634989 MAP3K13O43283 966 aa12.24□□□□□ -0.45
SMARCA2-232ENST00000634989 POTEIP0CG38 1075 aa12.24□□□□□ -0.45
SMARCA2-232ENST00000634989 MS4A3Q96HJ5 214 aa12.24□□□□□ -0.45
SMARCA2-232ENST00000634989 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
SMARCA2-232ENST00000634989 ZNF467Q7Z7K2 595 aaPredicted RBP12.19□□□□□ -0.46
SMARCA2-232ENST00000634989 IFNL1Q8IU54 200 aa12.14□□□□□ -0.47
SMARCA2-232ENST00000634989 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
SMARCA2-232ENST00000634989 P3H3Q8IVL6 736 aa12.12□□□□□ -0.47
SMARCA2-232ENST00000634989 PCDHB8Q9UN66 801 aa12.11□□□□□ -0.47
SMARCA2-232ENST00000634989 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
SMARCA2-232ENST00000634989 PELP1Q8IZL8 1130 aaKnown RBP12.09□□□□□ -0.47
SMARCA2-232ENST00000634989 CLCN6P51797 869 aa12.04□□□□□ -0.48
SMARCA2-232ENST00000634989 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
SMARCA2-232ENST00000634989 ATMINO43313 823 aaPredicted RBP12.01□□□□□ -0.49
SMARCA2-232ENST00000634989 PSEN1P49768 467 aa12.01□□□□□ -0.49
SMARCA2-232ENST00000634989 ATN1P54259 1190 aaPredicted RBP12.01□□□□□ -0.49
SMARCA2-232ENST00000634989 WDR70Q9NW82 654 aa12.01□□□□□ -0.49
SMARCA2-232ENST00000634989 DCBLD2Q96PD2 775 aa12□□□□□ -0.49
SMARCA2-232ENST00000634989 ASTLQ6HA08 431 aaPredicted RBP11.99□□□□□ -0.49
SMARCA2-232ENST00000634989 CADPS2Q86UW7 1296 aa11.98□□□□□ -0.49
SMARCA2-232ENST00000634989 TTLL13PA6NNM8 815 aa11.97□□□□□ -0.49
SMARCA2-232ENST00000634989 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
SMARCA2-232ENST00000634989 KCNV2Q8TDN2 545 aa11.95□□□□□ -0.5
SMARCA2-232ENST00000634989 TIE1P35590 1138 aa11.93□□□□□ -0.5
SMARCA2-232ENST00000634989 POTEFA5A3E0 1075 aa11.9□□□□□ -0.5
SMARCA2-232ENST00000634989 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.5
SMARCA2-232ENST00000634989 SOX12O15370 315 aa11.89□□□□□ -0.51
SMARCA2-232ENST00000634989 NLRP6P59044 892 aa11.89□□□□□ -0.51
SMARCA2-232ENST00000634989 POTEB2H3BUK9 544 aa11.88□□□□□ -0.51
SMARCA2-232ENST00000634989 TRIM35Q9UPQ4 493 aa11.88□□□□□ -0.51
SMARCA2-232ENST00000634989 FBXO22Q8NEZ5 403 aa11.87□□□□□ -0.51
SMARCA2-232ENST00000634989 EFCAB3Q8N7B9 438 aa11.85□□□□□ -0.51
SMARCA2-232ENST00000634989 LMOD2Q6P5Q4 547 aa11.84□□□□□ -0.51
SMARCA2-232ENST00000634989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMARCA2-232ENST00000634989 ARHGEF1Q92888 912 aaKnown RBP11.84□□□□□ -0.51
SMARCA2-232ENST00000634989 TULP1O00294 542 aaPredicted RBP11.83□□□□□ -0.52
SMARCA2-232ENST00000634989 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
SMARCA2-232ENST00000634989 COLQQ9Y215 455 aaPredicted RBP11.83□□□□□ -0.52
SMARCA2-232ENST00000634989 PPP1R37O75864 691 aa11.82□□□□□ -0.52
SMARCA2-232ENST00000634989 POTEJP0CG39 1038 aa11.81□□□□□ -0.52
SMARCA2-232ENST00000634989 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
SMARCA2-232ENST00000634989 ABCC9O60706 1549 aa11.81□□□□□ -0.52
SMARCA2-232ENST00000634989 PHF8Q9UPP1 1060 aa11.8□□□□□ -0.52
SMARCA2-232ENST00000634989 E2F4Q16254 413 aa11.79□□□□□ -0.52
SMARCA2-232ENST00000634989 TMEM132AQ24JP5 1023 aa11.76□□□□□ -0.53
SMARCA2-232ENST00000634989 SLC39A7Q92504 469 aa11.75□□□□□ -0.53
SMARCA2-232ENST00000634989 C7P10643 843 aa11.73□□□□□ -0.53
SMARCA2-232ENST00000634989 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
SMARCA2-232ENST00000634989 LHX8Q68G74 356 aa11.72□□□□□ -0.53
SMARCA2-232ENST00000634989 GTF3C3Q9Y5Q9 886 aa11.72□□□□□ -0.53
SMARCA2-232ENST00000634989 NCKAP5LQ9HCH0 1330 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms