RNA–Protein interactions for RNA: ENST00000630804.2

SPTAN1-222, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-222	ENST00000630804	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.84	□□□□□ -0.67
SPTAN1-222	ENST00000630804	DDRGK1	Q96HY6	314 aa		10.84	□□□□□ -0.67
SPTAN1-222	ENST00000630804	FAM9B	Q8IZU0	186 aa		10.83	□□□□□ -0.68
SPTAN1-222	ENST00000630804	GOLGA6L6	A8MZA4	724 aa		10.83	□□□□□ -0.68
SPTAN1-222	ENST00000630804	TPRN	Q4KMQ1	711 aa		10.83	□□□□□ -0.68
SPTAN1-222	ENST00000630804	CCDC180	Q9P1Z9	1646 aa		10.83	□□□□□ -0.68
SPTAN1-222	ENST00000630804	NRDC	O43847	1150 aa		10.8	□□□□□ -0.68
SPTAN1-222	ENST00000630804	PLCB2	Q00722	1185 aa		10.8	□□□□□ -0.68
SPTAN1-222	ENST00000630804	TMC1	Q8TDI8	760 aa		10.79	□□□□□ -0.68
SPTAN1-222	ENST00000630804	WDR43	Q15061	677 aa	Known RBP eCLIP	10.79	□□□□□ -0.68	2e-6	■■■□□ 18.6
SPTAN1-222	ENST00000630804	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.79	□□□□□ -0.68	2e-7	■■■□□ 15.9
SPTAN1-222	ENST00000630804	CHAF1A	Q13111	956 aa	Predicted RBP	10.78	□□□□□ -0.68
SPTAN1-222	ENST00000630804	RB1CC1	Q8TDY2	1594 aa		10.77	□□□□□ -0.69
SPTAN1-222	ENST00000630804	CASC1	Q6TDU7	716 aa		10.77	□□□□□ -0.69
SPTAN1-222	ENST00000630804	MTUS2	Q5JR59	1369 aa		10.75	□□□□□ -0.69
SPTAN1-222	ENST00000630804	L1TD1	Q5T7N2	865 aa	Known RBP	10.75	□□□□□ -0.69
SPTAN1-222	ENST00000630804	CLSTN1	O94985	981 aa		10.74	□□□□□ -0.69
SPTAN1-222	ENST00000630804	RTN4	Q9NQC3	1192 aa	Known RBP	10.73	□□□□□ -0.69
SPTAN1-222	ENST00000630804	PPP1R15A	O75807	674 aa	Predicted RBP	10.73	□□□□□ -0.69
SPTAN1-222	ENST00000630804	TAOK2	Q9UL54	1235 aa		10.72	□□□□□ -0.69
SPTAN1-222	ENST00000630804	ZBTB7C	A1YPR0	619 aa		10.72	□□□□□ -0.69
SPTAN1-222	ENST00000630804	C14orf37	Q86TY3	774 aa		10.72	□□□□□ -0.69
SPTAN1-222	ENST00000630804	PRM3	Q9NNZ6	103 aa		10.72	□□□□□ -0.69
SPTAN1-222	ENST00000630804	TNNT3	P45378	269 aa	Predicted RBP	10.71	□□□□□ -0.69
SPTAN1-222	ENST00000630804	HAP1	P54257	671 aa	Predicted RBP	10.71	□□□□□ -0.69
SPTAN1-222	ENST00000630804	NOC3L	Q8WTT2	800 aa	Known RBP	10.69	□□□□□ -0.7
SPTAN1-222	ENST00000630804	CHIC2	Q9UKJ5	165 aa		10.69	□□□□□ -0.7
SPTAN1-222	ENST00000630804	PLEKHD1	A6NEE1	506 aa		10.68	□□□□□ -0.7
SPTAN1-222	ENST00000630804	PNN	Q9H307	717 aa	Known RBP	10.68	□□□□□ -0.7
SPTAN1-222	ENST00000630804	RSF1	Q96T23	1441 aa	Predicted RBP	10.67	□□□□□ -0.7
SPTAN1-222	ENST00000630804	MSN	P26038	577 aa	Known RBP	10.67	□□□□□ -0.7
SPTAN1-222	ENST00000630804	NPHP1	O15259	732 aa		10.67	□□□□□ -0.7
SPTAN1-222	ENST00000630804	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.67	□□□□□ -0.7
SPTAN1-222	ENST00000630804	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.67	□□□□□ -0.7
SPTAN1-222	ENST00000630804	FGD1	P98174	961 aa		10.67	□□□□□ -0.7
SPTAN1-222	ENST00000630804	KIAA2012	Q0VF49	1180 aa		10.67	□□□□□ -0.7
SPTAN1-222	ENST00000630804	DDX10	Q13206	875 aa	Known RBP	10.66	□□□□□ -0.7
SPTAN1-222	ENST00000630804	KDM2A	Q9Y2K7	1162 aa		10.66	□□□□□ -0.7
SPTAN1-222	ENST00000630804	IRX6	P78412	446 aa	Predicted RBP	10.65	□□□□□ -0.7
SPTAN1-222	ENST00000630804	DRC7	Q8IY82	874 aa		10.65	□□□□□ -0.7
SPTAN1-222	ENST00000630804	PPM1G	O15355	546 aa	Predicted RBP	10.65	□□□□□ -0.7
SPTAN1-222	ENST00000630804	PLEKHG5	O94827	1062 aa		10.64	□□□□□ -0.71
SPTAN1-222	ENST00000630804	KCNH8	Q96L42	1107 aa		10.64	□□□□□ -0.71
SPTAN1-222	ENST00000630804	GOLGA6L4	A6NEF3	574 aa		10.64	□□□□□ -0.71
SPTAN1-222	ENST00000630804	CALR	P27797	417 aa	Known RBP	10.64	□□□□□ -0.71
SPTAN1-222	ENST00000630804	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.64	□□□□□ -0.71
SPTAN1-222	ENST00000630804	CDCA8	Q53HL2	280 aa		10.62	□□□□□ -0.71
SPTAN1-222	ENST00000630804	MRS2	Q9HD23	443 aa		10.62	□□□□□ -0.71
SPTAN1-222	ENST00000630804	HSP90AB1	P08238	724 aa	Known RBP	10.62	□□□□□ -0.71
SPTAN1-222	ENST00000630804	ERCC6	Q03468	1493 aa		10.61	□□□□□ -0.71
SPTAN1-222	ENST00000630804		A0A0U1RQG5	324 aa	Predicted RBP	10.61	□□□□□ -0.71
SPTAN1-222	ENST00000630804	FTSJ3	Q8IY81	847 aa	Known RBP	10.6	□□□□□ -0.71
SPTAN1-222	ENST00000630804	DCAF1	Q9Y4B6	1507 aa		10.6	□□□□□ -0.71
SPTAN1-222	ENST00000630804	KCNJ4	P48050	445 aa		10.6	□□□□□ -0.71
SPTAN1-222	ENST00000630804	NACAD	O15069	1562 aa		10.6	□□□□□ -0.71
SPTAN1-222	ENST00000630804	GOLGA2	Q08379	1002 aa		10.59	□□□□□ -0.71
SPTAN1-222	ENST00000630804	CFAP53	Q96M91	514 aa		10.58	□□□□□ -0.72
SPTAN1-222	ENST00000630804	GOLGA6L1	Q8N7Z2	621 aa		10.58	□□□□□ -0.72
SPTAN1-222	ENST00000630804	EEA1	Q15075	1411 aa		10.58	□□□□□ -0.72
SPTAN1-222	ENST00000630804	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.57	□□□□□ -0.72
SPTAN1-222	ENST00000630804	LAS1L	Q9Y4W2	734 aa	Known RBP	10.57	□□□□□ -0.72
SPTAN1-222	ENST00000630804	CLIP1	P30622	1438 aa		10.57	□□□□□ -0.72
SPTAN1-222	ENST00000630804	BAZ1B	Q9UIG0	1483 aa	Known RBP	10.56	□□□□□ -0.72
SPTAN1-222	ENST00000630804	MIER1	Q8N108	512 aa		10.56	□□□□□ -0.72
SPTAN1-222	ENST00000630804	ARID3A	Q99856	593 aa		10.55	□□□□□ -0.72
SPTAN1-222	ENST00000630804	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.55	□□□□□ -0.72
SPTAN1-222	ENST00000630804	OS9	Q13438	667 aa	Predicted RBP	10.54	□□□□□ -0.72
SPTAN1-222	ENST00000630804	HDGF	P51858	240 aa	Known RBP	10.53	□□□□□ -0.72
SPTAN1-222	ENST00000630804	ISY1	Q9ULR0	285 aa	Known RBP	10.53	□□□□□ -0.72
SPTAN1-222	ENST00000630804	SET	Q01105	290 aa	Predicted RBP	10.53	□□□□□ -0.72
SPTAN1-222	ENST00000630804	KIF27	Q86VH2	1401 aa		10.52	□□□□□ -0.72
SPTAN1-222	ENST00000630804	GNL2	Q13823	731 aa	Known RBP	10.52	□□□□□ -0.72
SPTAN1-222	ENST00000630804	USP35	Q9P2H5	1018 aa		10.52	□□□□□ -0.72
SPTAN1-222	ENST00000630804	RRP7BP	Q9NSQ0	103 aa		10.52	□□□□□ -0.73
SPTAN1-222	ENST00000630804	KNSTRN	Q9Y448	316 aa		10.51	□□□□□ -0.73
SPTAN1-222	ENST00000630804	KRI1	Q8N9T8	703 aa	Known RBP	10.51	□□□□□ -0.73
SPTAN1-222	ENST00000630804	PDE4C	Q08493	712 aa		10.51	□□□□□ -0.73
SPTAN1-222	ENST00000630804	GOLGA3	Q08378	1498 aa		10.5	□□□□□ -0.73
SPTAN1-222	ENST00000630804	NOP58	Q9Y2X3	529 aa	Known RBP	10.49	□□□□□ -0.73
SPTAN1-222	ENST00000630804	RGL3	Q3MIN7	710 aa		10.49	□□□□□ -0.73
SPTAN1-222	ENST00000630804	HSCB	Q8IWL3	235 aa		10.49	□□□□□ -0.73
SPTAN1-222	ENST00000630804	POGK	Q9P215	609 aa		10.49	□□□□□ -0.73
SPTAN1-222	ENST00000630804	NUDC	Q9Y266	331 aa		10.48	□□□□□ -0.73
SPTAN1-222	ENST00000630804	TRH	P20396	242 aa	Predicted RBP	10.48	□□□□□ -0.73
SPTAN1-222	ENST00000630804	LMOD2	Q6P5Q4	547 aa		10.47	□□□□□ -0.73
SPTAN1-222	ENST00000630804	CHMP4B	Q9H444	224 aa	Known RBP	10.47	□□□□□ -0.73
SPTAN1-222	ENST00000630804	MCC	P23508	829 aa		10.47	□□□□□ -0.73
SPTAN1-222	ENST00000630804	RGS3	P49796	1198 aa		10.47	□□□□□ -0.73
SPTAN1-222	ENST00000630804	KANK1	Q14678	1352 aa		10.46	□□□□□ -0.73
SPTAN1-222	ENST00000630804	DEK	P35659	375 aa	Known RBP	10.46	□□□□□ -0.74
SPTAN1-222	ENST00000630804	SENP3	Q9H4L4	574 aa	Predicted RBP	10.46	□□□□□ -0.74
SPTAN1-222	ENST00000630804	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.46	□□□□□ -0.74
SPTAN1-222	ENST00000630804	CEP89	Q96ST8	783 aa		10.45	□□□□□ -0.74
SPTAN1-222	ENST00000630804	MAPK8IP3	Q9UPT6	1336 aa		10.45	□□□□□ -0.74
SPTAN1-222	ENST00000630804	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.45	□□□□□ -0.74
SPTAN1-222	ENST00000630804	TPM4	P67936	248 aa		10.44	□□□□□ -0.74
SPTAN1-222	ENST00000630804	FBXO3	Q9UK99	471 aa		10.43	□□□□□ -0.74
SPTAN1-222	ENST00000630804	CARD11	Q9BXL7	1154 aa		10.42	□□□□□ -0.74
SPTAN1-222	ENST00000630804	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.42	□□□□□ -0.74
SPTAN1-222	ENST00000630804	PATL2	C9JE40	543 aa	Known RBP	10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms