RNA–Protein interactions for RNA: ENST00000629999.2

DDX49-214, Transcript of DEAD-box helicase 49, humanhuman

TSL 5 BASIC

Gene DDX49, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-214ENST00000629999 ARHGAP35Q9NRY4 1499 aa23.06■■□□□ 1.28
DDX49-214ENST00000629999 MAGI1Q96QZ7 1491 aaPredicted RBP23.01■■□□□ 1.27
DDX49-214ENST00000629999 PCGF6Q9BYE7 350 aa22.99■■□□□ 1.27
DDX49-214ENST00000629999 TTBK1Q5TCY1 1321 aaPredicted RBP22.96■■□□□ 1.27
DDX49-214ENST00000629999 GRIN2AQ12879 1464 aa22.95■■□□□ 1.26
DDX49-214ENST00000629999 P3H3Q8IVL6 736 aa22.95■■□□□ 1.26
DDX49-214ENST00000629999 FBLN2P98095 1184 aa22.94■■□□□ 1.26
DDX49-214ENST00000629999 SYNJ2O15056 1496 aa22.94■■□□□ 1.26
DDX49-214ENST00000629999 CHMP7Q8WUX9 453 aaPredicted RBP22.94■■□□□ 1.26
DDX49-214ENST00000629999 TRIM26Q12899 539 aaPredicted RBP22.92■■□□□ 1.26
DDX49-214ENST00000629999 EFCAB5A4FU69 1503 aa22.91■■□□□ 1.26
DDX49-214ENST00000629999 FHOD3Q2V2M9 1422 aa22.89■■□□□ 1.26
DDX49-214ENST00000629999 IQGAP2Q13576 1575 aa22.88■■□□□ 1.25
DDX49-214ENST00000629999 APLP2Q06481 763 aa22.88■■□□□ 1.25
DDX49-214ENST00000629999 SAMD9Q5K651 1589 aa22.83■■□□□ 1.25
DDX49-214ENST00000629999 CEP170Q5SW79 1584 aa22.82■■□□□ 1.24
DDX49-214ENST00000629999 KIAA0586Q9BVV6 1533 aa22.81■■□□□ 1.24
DDX49-214ENST00000629999 NUP160Q12769 1436 aa22.76■■□□□ 1.23
DDX49-214ENST00000629999 PCF11O94913 1555 aaKnown RBP22.76■■□□□ 1.23
DDX49-214ENST00000629999 UGGT2Q9NYU1 1516 aa22.74■■□□□ 1.23
DDX49-214ENST00000629999 CHD1O14646 1710 aa22.73■■□□□ 1.23
DDX49-214ENST00000629999 ATP1B4Q9UN42 357 aaPredicted RBP22.72■■□□□ 1.23
DDX49-214ENST00000629999 FMN1Q68DA7 1419 aa22.72■■□□□ 1.23
DDX49-214ENST00000629999 FYCO1Q9BQS8 1478 aa22.67■■□□□ 1.22
DDX49-214ENST00000629999 KANK4Q5T7N3 995 aaPredicted RBP22.67■■□□□ 1.22
DDX49-214ENST00000629999 CASKIN1Q8WXD9 1431 aa22.66■■□□□ 1.22
DDX49-214ENST00000629999 KIAA0556O60303 1618 aa22.66■■□□□ 1.22
DDX49-214ENST00000629999 DISP1Q96F81 1524 aa22.65■■□□□ 1.22
DDX49-214ENST00000629999 TIAM1Q13009 1591 aa22.64■■□□□ 1.21
DDX49-214ENST00000629999 JPH4Q96JJ6 628 aa22.61■■□□□ 1.21
DDX49-214ENST00000629999 MAP3K1Q13233 1512 aa22.59■■□□□ 1.21
DDX49-214ENST00000629999 CFAP43Q8NDM7 1665 aa22.59■■□□□ 1.21
DDX49-214ENST00000629999 CARMIL2Q6F5E8 1435 aa22.55■■□□□ 1.2
DDX49-214ENST00000629999 LRRC9Q6ZRR7 1453 aa22.53■■□□□ 1.2
DDX49-214ENST00000629999 LRRIQ1Q96JM4 1722 aa22.51■■□□□ 1.19
DDX49-214ENST00000629999 HECW1Q76N89 1606 aa22.5■■□□□ 1.19
DDX49-214ENST00000629999 PRG4Q92954 1404 aaPredicted RBP22.49■■□□□ 1.19
DDX49-214ENST00000629999 ARID3CA6NKF2 412 aa22.47■■□□□ 1.19
DDX49-214ENST00000629999 MYT1Q01538 1121 aa22.45■■□□□ 1.18
DDX49-214ENST00000629999 SHROOM2Q13796 1616 aa22.43■■□□□ 1.18
DDX49-214ENST00000629999 RAPGEF6Q8TEU7 1601 aa22.43■■□□□ 1.18
DDX49-214ENST00000629999 CCDC18Q5T9S5 1454 aa22.43■■□□□ 1.18
DDX49-214ENST00000629999 CLASP1Q7Z460 1538 aa22.43■■□□□ 1.18
DDX49-214ENST00000629999 EPRSP07814 1512 aaKnown RBP22.42■■□□□ 1.18
DDX49-214ENST00000629999 CDK13Q14004 1512 aaKnown RBP22.42■■□□□ 1.18
DDX49-214ENST00000629999 MTUS2Q5JR59 1369 aa22.41■■□□□ 1.18
DDX49-214ENST00000629999 PLB1Q6P1J6 1458 aa22.41■■□□□ 1.18
DDX49-214ENST00000629999 PELP1Q8IZL8 1130 aaKnown RBP22.39■■□□□ 1.18
DDX49-214ENST00000629999 NUP153P49790 1475 aaKnown RBP22.39■■□□□ 1.17
DDX49-214ENST00000629999 ERCC6L2Q5T890 1561 aa22.36■■□□□ 1.17
DDX49-214ENST00000629999 PHLDB1Q86UU1 1377 aa22.36■■□□□ 1.17
DDX49-214ENST00000629999 HNRNPUL2Q1KMD3 747 aaKnown RBP22.35■■□□□ 1.17
DDX49-214ENST00000629999 MAGI3Q5TCQ9 1506 aa22.34■■□□□ 1.17
DDX49-214ENST00000629999 EHBP1L1Q8N3D4 1523 aa22.34■■□□□ 1.17
DDX49-214ENST00000629999 PTPRGP23470 1445 aa22.34■■□□□ 1.17
DDX49-214ENST00000629999 RRBP1Q9P2E9 1410 aaKnown RBP22.34■■□□□ 1.17
DDX49-214ENST00000629999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.33■■□□□ 1.16
DDX49-214ENST00000629999 CCNB3Q8WWL7 1395 aa22.31■■□□□ 1.16
DDX49-214ENST00000629999 ABCA8O94911 1581 aa22.31■■□□□ 1.16
DDX49-214ENST00000629999 SUPT6HQ7KZ85 1726 aaKnown RBP22.28■■□□□ 1.16
DDX49-214ENST00000629999 NCOA2Q15596 1464 aa22.27■■□□□ 1.16
DDX49-214ENST00000629999 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
DDX49-214ENST00000629999 HRCP23327 699 aa22.23■■□□□ 1.15
DDX49-214ENST00000629999 FAM50AQ14320 339 aaKnown RBP22.21■■□□□ 1.15
DDX49-214ENST00000629999 CDK11AQ9UQ88 783 aaPredicted RBP22.21■■□□□ 1.15
DDX49-214ENST00000629999 ITGAEP38570 1179 aa22.21■■□□□ 1.15
DDX49-214ENST00000629999 UACAQ9BZF9 1416 aa22.2■■□□□ 1.14
DDX49-214ENST00000629999 ARHGEF11O15085 1522 aa22.18■■□□□ 1.14
DDX49-214ENST00000629999 ATP10BO94823 1461 aa22.18■■□□□ 1.14
DDX49-214ENST00000629999 FGD6Q6ZV73 1430 aa22.18■■□□□ 1.14
DDX49-214ENST00000629999 MYOM3Q5VTT5 1437 aa22.17■■□□□ 1.14
DDX49-214ENST00000629999 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
DDX49-214ENST00000629999 TROQ12816 1431 aaPredicted RBP22.15■■□□□ 1.14
DDX49-214ENST00000629999 ABCC2Q92887 1545 aa22.13■■□□□ 1.13
DDX49-214ENST00000629999 PLEKHD1A6NEE1 506 aa22.1■■□□□ 1.13
DDX49-214ENST00000629999 KIF14Q15058 1648 aa22.09■■□□□ 1.13
DDX49-214ENST00000629999 CCER1Q8TC90 406 aaPredicted RBP22.08■■□□□ 1.13
DDX49-214ENST00000629999 PTPN23Q9H3S7 1636 aa22.07■■□□□ 1.12
DDX49-214ENST00000629999 ADCY10Q96PN6 1610 aa22.06■■□□□ 1.12
DDX49-214ENST00000629999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.05■■□□□ 1.12
DDX49-214ENST00000629999 UHRF1BP1LA0JNW5 1464 aa22.03■■□□□ 1.12
DDX49-214ENST00000629999 MIA2Q96PC5 1412 aa22■■□□□ 1.11
DDX49-214ENST00000629999 ZCCHC11Q5TAX3 1644 aaKnown RBP22■■□□□ 1.11
DDX49-214ENST00000629999 TCOF1Q13428 1488 aaKnown RBP21.99■■□□□ 1.11
DDX49-214ENST00000629999 KDM5BQ9UGL1 1544 aa21.97■■□□□ 1.11
DDX49-214ENST00000629999 ITSN2Q9NZM3 1697 aa21.96■■□□□ 1.11
DDX49-214ENST00000629999 GPATCH8Q9UKJ3 1502 aaKnown RBP21.96■■□□□ 1.11
DDX49-214ENST00000629999 ABCC10Q5T3U5 1492 aa21.95■■□□□ 1.1
DDX49-214ENST00000629999 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
DDX49-214ENST00000629999 CFDP1Q9UEE9 299 aaPredicted RBP21.94■■□□□ 1.1
DDX49-214ENST00000629999 PTPRKQ15262 1439 aa21.93■■□□□ 1.1
DDX49-214ENST00000629999 ZNF644Q9H582 1327 aaPredicted RBP21.92■■□□□ 1.1
DDX49-214ENST00000629999 ZNF777Q9ULD5 760 aaPredicted RBP21.9■■□□□ 1.1
DDX49-214ENST00000629999 CDC42BPAQ5VT25 1732 aa21.9■■□□□ 1.1
DDX49-214ENST00000629999 RAB3GAP2Q9H2M9 1393 aa21.9■■□□□ 1.1
DDX49-214ENST00000629999 SETD5Q9C0A6 1442 aa21.9■■□□□ 1.1
DDX49-214ENST00000629999 KCNH8Q96L42 1107 aa21.9■■□□□ 1.1
DDX49-214ENST00000629999 CAMSAP2Q08AD1 1489 aa21.88■■□□□ 1.09
DDX49-214ENST00000629999 TTC37Q6PGP7 1564 aa21.87■■□□□ 1.09
DDX49-214ENST00000629999 CHIC2Q9UKJ5 165 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms