RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 APLP2Q06481 763 aa18.2■□□□□ 0.5
CCDC163-201ENST00000625766 EIF4G3O43432 1585 aaKnown RBP18.19■□□□□ 0.5
CCDC163-201ENST00000625766 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
CCDC163-201ENST00000625766 CTTNBP2Q8WZ74 1663 aa18.17■□□□□ 0.5
CCDC163-201ENST00000625766 EFCAB5A4FU69 1503 aa18.16■□□□□ 0.5
CCDC163-201ENST00000625766 SNAPC4Q5SXM2 1469 aa18.15■□□□□ 0.5
CCDC163-201ENST00000625766 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
CCDC163-201ENST00000625766 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
CCDC163-201ENST00000625766 GRIN2AQ12879 1464 aa18.09■□□□□ 0.49
CCDC163-201ENST00000625766 P3H3Q8IVL6 736 aa18.08■□□□□ 0.49
CCDC163-201ENST00000625766 KIAA0586Q9BVV6 1533 aa18.08■□□□□ 0.48
CCDC163-201ENST00000625766 MAP3K1Q13233 1512 aa18.07■□□□□ 0.48
CCDC163-201ENST00000625766 SAMD9Q5K651 1589 aa18.07■□□□□ 0.48
CCDC163-201ENST00000625766 FHOD3Q2V2M9 1422 aa18.05■□□□□ 0.48
CCDC163-201ENST00000625766 FMN1Q68DA7 1419 aa18.04■□□□□ 0.48
CCDC163-201ENST00000625766 IQGAP2Q13576 1575 aa18.04■□□□□ 0.48
CCDC163-201ENST00000625766 KANK4Q5T7N3 995 aaPredicted RBP18.02■□□□□ 0.48
CCDC163-201ENST00000625766 CASKIN1Q8WXD9 1431 aa18.02■□□□□ 0.48
CCDC163-201ENST00000625766 UGGT2Q9NYU1 1516 aa18.02■□□□□ 0.47
CCDC163-201ENST00000625766 TTBK1Q5TCY1 1321 aaPredicted RBP18.01■□□□□ 0.47
CCDC163-201ENST00000625766 NUP160Q12769 1436 aa17.99■□□□□ 0.47
CCDC163-201ENST00000625766 FBLN2P98095 1184 aa17.99■□□□□ 0.47
CCDC163-201ENST00000625766 FYCO1Q9BQS8 1478 aa17.97■□□□□ 0.47
CCDC163-201ENST00000625766 HRCP23327 699 aa17.94■□□□□ 0.46
CCDC163-201ENST00000625766 TIAM1Q13009 1591 aa17.94■□□□□ 0.46
CCDC163-201ENST00000625766 CEP170Q5SW79 1584 aa17.93■□□□□ 0.46
CCDC163-201ENST00000625766 JPH4Q96JJ6 628 aa17.92■□□□□ 0.46
CCDC163-201ENST00000625766 PCF11O94913 1555 aaKnown RBP17.92■□□□□ 0.46
CCDC163-201ENST00000625766 DISP1Q96F81 1524 aa17.91■□□□□ 0.46
CCDC163-201ENST00000625766 LRRC9Q6ZRR7 1453 aa17.9■□□□□ 0.46
CCDC163-201ENST00000625766 ATP1B4Q9UN42 357 aaPredicted RBP17.89■□□□□ 0.45
CCDC163-201ENST00000625766 KIAA0556O60303 1618 aa17.85■□□□□ 0.45
CCDC163-201ENST00000625766 RRBP1Q9P2E9 1410 aaKnown RBP17.84■□□□□ 0.45
CCDC163-201ENST00000625766 CARMIL2Q6F5E8 1435 aa17.83■□□□□ 0.45
CCDC163-201ENST00000625766 CFAP43Q8NDM7 1665 aa17.83■□□□□ 0.45
CCDC163-201ENST00000625766 CCDC18Q5T9S5 1454 aa17.79■□□□□ 0.44
CCDC163-201ENST00000625766 CCNB3Q8WWL7 1395 aa17.77■□□□□ 0.44
CCDC163-201ENST00000625766 ZEB1P37275 1124 aaPredicted RBP17.76■□□□□ 0.43
CCDC163-201ENST00000625766 HECW1Q76N89 1606 aa17.76■□□□□ 0.43
CCDC163-201ENST00000625766 EPRSP07814 1512 aaKnown RBP17.75■□□□□ 0.43
CCDC163-201ENST00000625766 CHD1O14646 1710 aa17.75■□□□□ 0.43
CCDC163-201ENST00000625766 MTUS2Q5JR59 1369 aa17.75■□□□□ 0.43
CCDC163-201ENST00000625766 PHLDB1Q86UU1 1377 aa17.75■□□□□ 0.43
CCDC163-201ENST00000625766 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
CCDC163-201ENST00000625766 LRRIQ1Q96JM4 1722 aa17.73■□□□□ 0.43
CCDC163-201ENST00000625766 PRG4Q92954 1404 aaPredicted RBP17.72■□□□□ 0.43
CCDC163-201ENST00000625766 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.7■□□□□ 0.42
CCDC163-201ENST00000625766 NUP153P49790 1475 aaKnown RBP17.69■□□□□ 0.42
CCDC163-201ENST00000625766 RAPGEF6Q8TEU7 1601 aa17.68■□□□□ 0.42
CCDC163-201ENST00000625766 SHROOM2Q13796 1616 aa17.68■□□□□ 0.42
CCDC163-201ENST00000625766 EHBP1L1Q8N3D4 1523 aa17.68■□□□□ 0.42
CCDC163-201ENST00000625766 CDK11AQ9UQ88 783 aaPredicted RBP17.67■□□□□ 0.42
CCDC163-201ENST00000625766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
CCDC163-201ENST00000625766 PTPRGP23470 1445 aa17.66■□□□□ 0.42
CCDC163-201ENST00000625766 NCOA2Q15596 1464 aa17.65■□□□□ 0.42
CCDC163-201ENST00000625766 PLB1Q6P1J6 1458 aa17.65■□□□□ 0.42
CCDC163-201ENST00000625766 ARHGEF11O15085 1522 aa17.65■□□□□ 0.42
CCDC163-201ENST00000625766 MAGI3Q5TCQ9 1506 aa17.65■□□□□ 0.42
CCDC163-201ENST00000625766 CLASP1Q7Z460 1538 aa17.64■□□□□ 0.41
CCDC163-201ENST00000625766 CCER1Q8TC90 406 aaPredicted RBP17.63■□□□□ 0.41
CCDC163-201ENST00000625766 CDK13Q14004 1512 aaKnown RBP17.63■□□□□ 0.41
CCDC163-201ENST00000625766 ABCA8O94911 1581 aa17.63■□□□□ 0.41
CCDC163-201ENST00000625766 SUPT6HQ7KZ85 1726 aaKnown RBP17.61■□□□□ 0.41
CCDC163-201ENST00000625766 FGD6Q6ZV73 1430 aa17.61■□□□□ 0.41
CCDC163-201ENST00000625766 MYOM3Q5VTT5 1437 aa17.6■□□□□ 0.41
CCDC163-201ENST00000625766 FAM50AQ14320 339 aaKnown RBP17.59■□□□□ 0.41
CCDC163-201ENST00000625766 ARID3CA6NKF2 412 aa17.58■□□□□ 0.4
CCDC163-201ENST00000625766 ATP10BO94823 1461 aa17.56■□□□□ 0.4
CCDC163-201ENST00000625766 TROQ12816 1431 aaPredicted RBP17.55■□□□□ 0.4
CCDC163-201ENST00000625766 UACAQ9BZF9 1416 aa17.55■□□□□ 0.4
CCDC163-201ENST00000625766 MIA2Q96PC5 1412 aa17.55■□□□□ 0.4
CCDC163-201ENST00000625766 PLEKHD1A6NEE1 506 aa17.54■□□□□ 0.4
CCDC163-201ENST00000625766 OSCARQ8IYS5 282 aa17.54■□□□□ 0.4
CCDC163-201ENST00000625766 ITGAEP38570 1179 aa17.52■□□□□ 0.4
CCDC163-201ENST00000625766 ERCC6L2Q5T890 1561 aa17.51■□□□□ 0.39
CCDC163-201ENST00000625766 TCOF1Q13428 1488 aaKnown RBP17.51■□□□□ 0.39
CCDC163-201ENST00000625766 SETD5Q9C0A6 1442 aa17.48■□□□□ 0.39
CCDC163-201ENST00000625766 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
CCDC163-201ENST00000625766 UHRF1BP1LA0JNW5 1464 aa17.46■□□□□ 0.39
CCDC163-201ENST00000625766 PTPN23Q9H3S7 1636 aa17.45■□□□□ 0.38
CCDC163-201ENST00000625766 ABCC2Q92887 1545 aa17.45■□□□□ 0.38
CCDC163-201ENST00000625766 ADCY10Q96PN6 1610 aa17.44■□□□□ 0.38
CCDC163-201ENST00000625766 RAB3GAP2Q9H2M9 1393 aa17.43■□□□□ 0.38
CCDC163-201ENST00000625766 PTPRKQ15262 1439 aa17.43■□□□□ 0.38
CCDC163-201ENST00000625766 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
CCDC163-201ENST00000625766 GPATCH8Q9UKJ3 1502 aaKnown RBP17.42■□□□□ 0.38
CCDC163-201ENST00000625766 CFDP1Q9UEE9 299 aaPredicted RBP17.4■□□□□ 0.38
CCDC163-201ENST00000625766 ABCC10Q5T3U5 1492 aa17.39■□□□□ 0.38
CCDC163-201ENST00000625766 KDM5BQ9UGL1 1544 aa17.37■□□□□ 0.37
CCDC163-201ENST00000625766 HFM1A2PYH4 1435 aa17.37■□□□□ 0.37
CCDC163-201ENST00000625766 KIF14Q15058 1648 aa17.36■□□□□ 0.37
CCDC163-201ENST00000625766 ZNF644Q9H582 1327 aaPredicted RBP17.35■□□□□ 0.37
CCDC163-201ENST00000625766 AKNAQ7Z591 1439 aa17.33■□□□□ 0.37
CCDC163-201ENST00000625766 NAIPQ13075 1403 aa17.33■□□□□ 0.36
CCDC163-201ENST00000625766 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
CCDC163-201ENST00000625766 ABCC5O15440 1437 aa17.32■□□□□ 0.36
CCDC163-201ENST00000625766 ROCK1Q13464 1354 aa17.32■□□□□ 0.36
CCDC163-201ENST00000625766 DAPK1P53355 1430 aa17.31■□□□□ 0.36
CCDC163-201ENST00000625766 ACIN1Q9UKV3 1341 aaKnown RBP17.3■□□□□ 0.36
CCDC163-201ENST00000625766 CHIC2Q9UKJ5 165 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms