RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 TRHP20396 242 aaPredicted RBP12.94□□□□□ -0.34
CDKL5-206ENST00000623610 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.94□□□□□ -0.34
CDKL5-206ENST00000623610 ZBTB7CA1YPR0 619 aa12.92□□□□□ -0.34
CDKL5-206ENST00000623610 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
CDKL5-206ENST00000623610 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
CDKL5-206ENST00000623610 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.34
CDKL5-206ENST00000623610 PKNOX2Q96KN3 472 aa12.9□□□□□ -0.34
CDKL5-206ENST00000623610 POLR3GLQ9BT43 218 aa12.88□□□□□ -0.35
CDKL5-206ENST00000623610 BBXQ8WY36 941 aaPredicted RBP12.86□□□□□ -0.35
CDKL5-206ENST00000623610 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDKL5-206ENST00000623610 CC2D2AQ9P2K1 1620 aa12.85□□□□□ -0.35
CDKL5-206ENST00000623610 MSH5O43196 834 aa12.8□□□□□ -0.36
CDKL5-206ENST00000623610 PKD2Q13563 968 aa12.79□□□□□ -0.36
CDKL5-206ENST00000623610 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDKL5-206ENST00000623610 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.36
CDKL5-206ENST00000623610 CECR2Q9BXF3 1484 aa12.77□□□□□ -0.37
CDKL5-206ENST00000623610 C1orf115Q9H7X2 142 aa12.77□□□□□ -0.37
CDKL5-206ENST00000623610 FGD1P98174 961 aa12.76□□□□□ -0.37
CDKL5-206ENST00000623610 DNAJC5Q9H3Z4 198 aa12.73□□□□□ -0.37
CDKL5-206ENST00000623610 BCCIPQ9P287 314 aaKnown RBP eCLIP12.71□□□□□ -0.37
CDKL5-206ENST00000623610 HOXD11P31277 338 aaPredicted RBP12.7□□□□□ -0.38
CDKL5-206ENST00000623610 ZNF428Q96B54 188 aa12.7□□□□□ -0.38
CDKL5-206ENST00000623610 SMARCA4P51532 1647 aa12.68□□□□□ -0.38
CDKL5-206ENST00000623610 ZMYND15Q9H091 742 aa12.67□□□□□ -0.38
CDKL5-206ENST00000623610 RSPH6AQ9H0K4 717 aa12.66□□□□□ -0.38
CDKL5-206ENST00000623610 BAZ1AQ9NRL2 1556 aaPredicted RBP12.66□□□□□ -0.38
CDKL5-206ENST00000623610 ATXN8OSP0DMR3 200 aa12.64□□□□□ -0.39
CDKL5-206ENST00000623610 KCTD17Q8N5Z5 321 aa12.64□□□□□ -0.39
CDKL5-206ENST00000623610 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
CDKL5-206ENST00000623610 RAD21O60216 631 aa12.63□□□□□ -0.39
CDKL5-206ENST00000623610 IRX6P78412 446 aaPredicted RBP12.63□□□□□ -0.39
CDKL5-206ENST00000623610 MROH2BQ7Z745 1585 aa12.62□□□□□ -0.39
CDKL5-206ENST00000623610 RSPH4AQ5TD94 716 aa12.62□□□□□ -0.39
CDKL5-206ENST00000623610 DMRT2Q9Y5R5 561 aa12.62□□□□□ -0.39
CDKL5-206ENST00000623610 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
CDKL5-206ENST00000623610 ATAD2BQ9ULI0 1458 aa12.61□□□□□ -0.39
CDKL5-206ENST00000623610 RGS22Q8NE09 1264 aa12.6□□□□□ -0.39
CDKL5-206ENST00000623610 CCDC136Q96JN2 1154 aa12.59□□□□□ -0.39
CDKL5-206ENST00000623610 NCAPD3P42695 1498 aa12.58□□□□□ -0.4
CDKL5-206ENST00000623610 SMARCA2P51531 1590 aa12.57□□□□□ -0.4
CDKL5-206ENST00000623610 MTMR7Q9Y216 660 aa12.57□□□□□ -0.4
CDKL5-206ENST00000623610 BRPF3Q9ULD4 1205 aa12.56□□□□□ -0.4
CDKL5-206ENST00000623610 ARID3CA6NKF2 412 aa12.55□□□□□ -0.4
CDKL5-206ENST00000623610 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
CDKL5-206ENST00000623610 RBM25P49756 843 aaKnown RBP12.55□□□□□ -0.4
CDKL5-206ENST00000623610 PEG3Q9GZU2 1588 aa12.54□□□□□ -0.4
CDKL5-206ENST00000623610 FOXD4L5Q5VV16 416 aaPredicted RBP12.53□□□□□ -0.4
CDKL5-206ENST00000623610 FOXD4L4Q8WXT5 416 aaPredicted RBP12.53□□□□□ -0.4
CDKL5-206ENST00000623610 ZNF592Q92610 1267 aa12.52□□□□□ -0.4
CDKL5-206ENST00000623610 ZFP91Q96JP5 570 aaPredicted RBP12.52□□□□□ -0.41
CDKL5-206ENST00000623610 HMGXB3Q12766 1538 aa12.51□□□□□ -0.41
CDKL5-206ENST00000623610 BAZ1BQ9UIG0 1483 aaKnown RBP12.5□□□□□ -0.41
CDKL5-206ENST00000623610 TICAM2Q86XR7 235 aa12.5□□□□□ -0.41
CDKL5-206ENST00000623610 ATF5Q9Y2D1 282 aaPredicted RBP12.5□□□□□ -0.41
CDKL5-206ENST00000623610 WIZO95785 1651 aa12.5□□□□□ -0.41
CDKL5-206ENST00000623610 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.49□□□□□ -0.41
CDKL5-206ENST00000623610 ZNF326Q5BKZ1 582 aaKnown RBP12.49□□□□□ -0.41
CDKL5-206ENST00000623610 NEUROD2Q15784 382 aa12.47□□□□□ -0.41
CDKL5-206ENST00000623610 RSF1Q96T23 1441 aaPredicted RBP12.47□□□□□ -0.41
CDKL5-206ENST00000623610 A0A0U1RQG5 324 aaPredicted RBP12.46□□□□□ -0.42
CDKL5-206ENST00000623610 IFNLR1Q8IU57 520 aaPredicted RBP12.46□□□□□ -0.42
CDKL5-206ENST00000623610 FAM177A1Q8N128 213 aaPredicted RBP12.46□□□□□ -0.42
CDKL5-206ENST00000623610 CWC22Q9HCG8 908 aaKnown RBP12.46□□□□□ -0.42
CDKL5-206ENST00000623610 USP35Q9P2H5 1018 aa12.44□□□□□ -0.42
CDKL5-206ENST00000623610 ZEB1P37275 1124 aaPredicted RBP12.44□□□□□ -0.42
CDKL5-206ENST00000623610 TMED8Q6PL24 325 aaPredicted RBP12.42□□□□□ -0.42
CDKL5-206ENST00000623610 CERS3Q8IU89 383 aa12.41□□□□□ -0.42
CDKL5-206ENST00000623610 ANO8Q9HCE9 1232 aaPredicted RBP12.4□□□□□ -0.43
CDKL5-206ENST00000623610 APBB1O00213 710 aa12.38□□□□□ -0.43
CDKL5-206ENST00000623610 PSMD1Q99460 953 aa12.38□□□□□ -0.43
CDKL5-206ENST00000623610 CLSTN1O94985 981 aa12.37□□□□□ -0.43
CDKL5-206ENST00000623610 NAP1L5Q96NT1 182 aaPredicted RBP12.37□□□□□ -0.43
CDKL5-206ENST00000623610 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
CDKL5-206ENST00000623610 AAMPQ13685 434 aa12.33□□□□□ -0.44
CDKL5-206ENST00000623610 NESP48681 1621 aa12.32□□□□□ -0.44
CDKL5-206ENST00000623610 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
CDKL5-206ENST00000623610 PPM1GO15355 546 aaPredicted RBP12.31□□□□□ -0.44
CDKL5-206ENST00000623610 AEBP1Q8IUX7 1158 aa12.31□□□□□ -0.44
CDKL5-206ENST00000623610 MFAP1P55081 439 aaKnown RBP12.3□□□□□ -0.44
CDKL5-206ENST00000623610 TMCO4Q5TGY1 634 aa12.29□□□□□ -0.44
CDKL5-206ENST00000623610 ARID4BQ4LE39 1312 aaPredicted RBP12.28□□□□□ -0.44
CDKL5-206ENST00000623610 CC2D2BQ6DHV5 1058 aa12.27□□□□□ -0.45
CDKL5-206ENST00000623610 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
CDKL5-206ENST00000623610 PRDM16Q9HAZ2 1276 aa12.26□□□□□ -0.45
CDKL5-206ENST00000623610 CENPBP07199 599 aaPredicted RBP12.25□□□□□ -0.45
CDKL5-206ENST00000623610 LAMC3Q9Y6N6 1575 aa12.24□□□□□ -0.45
CDKL5-206ENST00000623610 ERCC6Q03468 1493 aa12.24□□□□□ -0.45
CDKL5-206ENST00000623610 ZNF526Q8TF50 670 aaPredicted RBP12.24□□□□□ -0.45
CDKL5-206ENST00000623610 E9PSI1 815 aa12.23□□□□□ -0.45
CDKL5-206ENST00000623610 ECM2O94769 699 aaPredicted RBP12.23□□□□□ -0.45
CDKL5-206ENST00000623610 CADPSQ9ULU8 1353 aa12.23□□□□□ -0.45
CDKL5-206ENST00000623610 RGL2O15211 777 aa12.21□□□□□ -0.45
CDKL5-206ENST00000623610 CCDC82Q8N4S0 544 aa12.21□□□□□ -0.45
CDKL5-206ENST00000623610 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
CDKL5-206ENST00000623610 PRDM10Q9NQV6 1147 aa12.2□□□□□ -0.46
CDKL5-206ENST00000623610 NCLP19338 710 aaKnown RBP12.17□□□□□ -0.46
CDKL5-206ENST00000623610 CCDC27Q2M243 656 aa12.17□□□□□ -0.46
CDKL5-206ENST00000623610 TRAIPQ9BWF2 469 aa12.17□□□□□ -0.46
CDKL5-206ENST00000623610 GZF1Q9H116 711 aaPredicted RBP12.17□□□□□ -0.46
CDKL5-206ENST00000623610 KIF21AQ7Z4S6 1674 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms