RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 EIF4G2P78344 907 aaKnown RBP eCLIP11.99□□□□□ -0.49
AP000542.3-201ENST00000623391 TIMELESSQ9UNS1 1208 aa11.99□□□□□ -0.49
AP000542.3-201ENST00000623391 SOGA1O94964 1423 aa11.98□□□□□ -0.49
AP000542.3-201ENST00000623391 FMN1Q68DA7 1419 aa11.98□□□□□ -0.49
AP000542.3-201ENST00000623391 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
AP000542.3-201ENST00000623391 CFDP1Q9UEE9 299 aaPredicted RBP11.98□□□□□ -0.49
AP000542.3-201ENST00000623391 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
AP000542.3-201ENST00000623391 CARMIL2Q6F5E8 1435 aa11.98□□□□□ -0.49
AP000542.3-201ENST00000623391 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
AP000542.3-201ENST00000623391 CCNB3Q8WWL7 1395 aa11.97□□□□□ -0.49
AP000542.3-201ENST00000623391 CADPSQ9ULU8 1353 aa11.97□□□□□ -0.49
AP000542.3-201ENST00000623391 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
AP000542.3-201ENST00000623391 ARHGAP35Q9NRY4 1499 aa11.97□□□□□ -0.49
AP000542.3-201ENST00000623391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.96□□□□□ -0.5
AP000542.3-201ENST00000623391 ANP32AP39687 249 aaKnown RBP11.94□□□□□ -0.5
AP000542.3-201ENST00000623391 SLC24A1O60721 1099 aa11.94□□□□□ -0.5
AP000542.3-201ENST00000623391 DDX10Q13206 875 aaKnown RBP11.93□□□□□ -0.5
AP000542.3-201ENST00000623391 RAPGEF2Q9Y4G8 1499 aa11.93□□□□□ -0.5
AP000542.3-201ENST00000623391 WDR43Q15061 677 aaKnown RBP eCLIP11.93□□□□□ -0.5
AP000542.3-201ENST00000623391 TMC1Q8TDI8 760 aa11.93□□□□□ -0.5
AP000542.3-201ENST00000623391 RRP7BPQ9NSQ0 103 aa11.92□□□□□ -0.5
AP000542.3-201ENST00000623391 HNRNPUQ00839 825 aaKnown RBP eCLIP11.91□□□□□ -0.5
AP000542.3-201ENST00000623391 KANK1Q14678 1352 aa11.89□□□□□ -0.51
AP000542.3-201ENST00000623391 SETD5Q9C0A6 1442 aa11.88□□□□□ -0.51
AP000542.3-201ENST00000623391 MRS2Q9HD23 443 aa11.86□□□□□ -0.51
AP000542.3-201ENST00000623391 KCNH8Q96L42 1107 aa11.85□□□□□ -0.51
AP000542.3-201ENST00000623391 UPF2Q9HAU5 1272 aaKnown RBP11.85□□□□□ -0.51
AP000542.3-201ENST00000623391 FAM9BQ8IZU0 186 aa11.85□□□□□ -0.51
AP000542.3-201ENST00000623391 KDM2AQ9Y2K7 1162 aa11.84□□□□□ -0.51
AP000542.3-201ENST00000623391 FKBP8Q14318 412 aa11.83□□□□□ -0.51
AP000542.3-201ENST00000623391 FANCD2Q9BXW9 1451 aa11.82□□□□□ -0.52
AP000542.3-201ENST00000623391 NCAPD3P42695 1498 aa11.81□□□□□ -0.52
AP000542.3-201ENST00000623391 CFAP53Q96M91 514 aa11.81□□□□□ -0.52
AP000542.3-201ENST00000623391 CCDC18Q5T9S5 1454 aa11.8□□□□□ -0.52
AP000542.3-201ENST00000623391 PPP1R15AO75807 674 aaPredicted RBP11.8□□□□□ -0.52
AP000542.3-201ENST00000623391 EIF5BO60841 1220 aaKnown RBP11.79□□□□□ -0.52
AP000542.3-201ENST00000623391 CARD11Q9BXL7 1154 aa11.78□□□□□ -0.52
AP000542.3-201ENST00000623391 RSPH4AQ5TD94 716 aa11.77□□□□□ -0.52
AP000542.3-201ENST00000623391 ANKRD30AQ9BXX3 1397 aa11.76□□□□□ -0.53
AP000542.3-201ENST00000623391 MIER1Q8N108 512 aa11.76□□□□□ -0.53
AP000542.3-201ENST00000623391 KNSTRNQ9Y448 316 aa11.76□□□□□ -0.53
AP000542.3-201ENST00000623391 HDGFP51858 240 aaKnown RBP11.75□□□□□ -0.53
AP000542.3-201ENST00000623391 CCDC136Q96JN2 1154 aa11.75□□□□□ -0.53
AP000542.3-201ENST00000623391 MYH16Q9H6N6 1097 aa11.73□□□□□ -0.53
AP000542.3-201ENST00000623391 TDRD9Q8NDG6 1382 aaKnown RBP11.73□□□□□ -0.53
AP000542.3-201ENST00000623391 HMGXB3Q12766 1538 aa11.73□□□□□ -0.53
AP000542.3-201ENST00000623391 PNNQ9H307 717 aaKnown RBP11.73□□□□□ -0.53
AP000542.3-201ENST00000623391 CCER2I3L3R5 266 aa11.71□□□□□ -0.53
AP000542.3-201ENST00000623391 KIF21BO75037 1637 aa11.71□□□□□ -0.54
AP000542.3-201ENST00000623391 TMF1P82094 1093 aa11.71□□□□□ -0.54
AP000542.3-201ENST00000623391 ERICH3Q5RHP9 1530 aa11.7□□□□□ -0.54
AP000542.3-201ENST00000623391 CUX1P39880 1505 aa11.7□□□□□ -0.54
AP000542.3-201ENST00000623391 EFCAB2Q5VUJ9 269 aa11.69□□□□□ -0.54
AP000542.3-201ENST00000623391 CHMP4BQ9H444 224 aaKnown RBP11.69□□□□□ -0.54
AP000542.3-201ENST00000623391 NUDCQ9Y266 331 aa11.68□□□□□ -0.54
AP000542.3-201ENST00000623391 ANP32BQ92688 251 aaKnown RBP11.68□□□□□ -0.54
AP000542.3-201ENST00000623391 FGD5Q6ZNL6 1462 aa11.68□□□□□ -0.54
AP000542.3-201ENST00000623391 RGL3Q3MIN7 710 aa11.68□□□□□ -0.54
AP000542.3-201ENST00000623391 DDRGK1Q96HY6 314 aa11.68□□□□□ -0.54
AP000542.3-201ENST00000623391 RAB3GAP2Q9H2M9 1393 aa11.67□□□□□ -0.54
AP000542.3-201ENST00000623391 FHOD3Q2V2M9 1422 aa11.67□□□□□ -0.54
AP000542.3-201ENST00000623391 MS4A1P11836 297 aa11.67□□□□□ -0.54
AP000542.3-201ENST00000623391 EIF3AQ14152 1382 aaKnown RBP11.66□□□□□ -0.54
AP000542.3-201ENST00000623391 HSP90AA1P07900 732 aaKnown RBP11.66□□□□□ -0.54
AP000542.3-201ENST00000623391 GAPVD1Q14C86 1478 aa11.65□□□□□ -0.54
AP000542.3-201ENST00000623391 ARID4BQ4LE39 1312 aaPredicted RBP11.65□□□□□ -0.54
AP000542.3-201ENST00000623391 KANK4Q5T7N3 995 aaPredicted RBP11.65□□□□□ -0.54
AP000542.3-201ENST00000623391 NPM2Q86SE8 214 aaKnown RBP11.64□□□□□ -0.55
AP000542.3-201ENST00000623391 SIN3AQ96ST3 1273 aa11.64□□□□□ -0.55
AP000542.3-201ENST00000623391 POGKQ9P215 609 aa11.63□□□□□ -0.55
AP000542.3-201ENST00000623391 CFTRP13569 1480 aa11.62□□□□□ -0.55
AP000542.3-201ENST00000623391 MAPK8IP3Q9UPT6 1336 aa11.62□□□□□ -0.55
AP000542.3-201ENST00000623391 ROCK2O75116 1388 aaKnown RBP11.61□□□□□ -0.55
AP000542.3-201ENST00000623391 MPHOSPH9Q99550 1183 aa11.61□□□□□ -0.55
AP000542.3-201ENST00000623391 EFCAB5A4FU69 1503 aa11.6□□□□□ -0.55
AP000542.3-201ENST00000623391 BECN1Q14457 450 aa11.6□□□□□ -0.55
AP000542.3-201ENST00000623391 PLPPR3Q6T4P5 718 aa11.6□□□□□ -0.55
AP000542.3-201ENST00000623391 DCAF11Q8TEB1 546 aa11.6□□□□□ -0.55
AP000542.3-201ENST00000623391 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
AP000542.3-201ENST00000623391 PKD2Q13563 968 aa11.6□□□□□ -0.55
AP000542.3-201ENST00000623391 UACAQ9BZF9 1416 aa11.6□□□□□ -0.55
AP000542.3-201ENST00000623391 HIRIP3Q9BW71 556 aaPredicted RBP11.59□□□□□ -0.55
AP000542.3-201ENST00000623391 KTN1Q86UP2 1357 aaKnown RBP11.59□□□□□ -0.55
AP000542.3-201ENST00000623391 NUP155O75694 1391 aa11.59□□□□□ -0.55
AP000542.3-201ENST00000623391 IGF1RP08069 1367 aa11.59□□□□□ -0.55
AP000542.3-201ENST00000623391 TOP2BQ02880 1626 aa11.59□□□□□ -0.55
AP000542.3-201ENST00000623391 RALBP1Q15311 655 aa11.58□□□□□ -0.56
AP000542.3-201ENST00000623391 ERICH6BQ5W0A0 696 aa11.58□□□□□ -0.56
AP000542.3-201ENST00000623391 ANP32EQ9BTT0 268 aa11.58□□□□□ -0.56
AP000542.3-201ENST00000623391 JPH4Q96JJ6 628 aa11.57□□□□□ -0.56
AP000542.3-201ENST00000623391 PPP4R2Q9NY27 417 aa11.57□□□□□ -0.56
AP000542.3-201ENST00000623391 C14orf37Q86TY3 774 aa11.57□□□□□ -0.56
AP000542.3-201ENST00000623391 HSPA5P11021 654 aaKnown RBP11.56□□□□□ -0.56
AP000542.3-201ENST00000623391 CASC1Q6TDU7 716 aa11.56□□□□□ -0.56
AP000542.3-201ENST00000623391 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
AP000542.3-201ENST00000623391 GRIN2BQ13224 1484 aa11.56□□□□□ -0.56
AP000542.3-201ENST00000623391 MRC2Q9UBG0 1479 aa11.55□□□□□ -0.56
AP000542.3-201ENST00000623391 CASKIN1Q8WXD9 1431 aa11.55□□□□□ -0.56
AP000542.3-201ENST00000623391 FYCO1Q9BQS8 1478 aa11.55□□□□□ -0.56
AP000542.3-201ENST00000623391 PTPRGP23470 1445 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms