RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 RUSC2Q8N2Y8 1516 aa28.51■■■□□ 2.15
CD99-211ENST00000623253 FAM69CQ0P6D2 419 aa28.45■■■□□ 2.14
CD99-211ENST00000623253 KIF13AQ9H1H9 1805 aa28.45■■■□□ 2.14
CD99-211ENST00000623253 IGF1RP08069 1367 aa28.43■■■□□ 2.14
CD99-211ENST00000623253 KIF27Q86VH2 1401 aa28.42■■■□□ 2.14
CD99-211ENST00000623253 KIAA0586Q9BVV6 1533 aa28.38■■■□□ 2.13
CD99-211ENST00000623253 ABCC10Q5T3U5 1492 aa28.36■■■□□ 2.13
CD99-211ENST00000623253 ADCY10Q96PN6 1610 aa28.32■■■□□ 2.12
CD99-211ENST00000623253 TTBK1Q5TCY1 1321 aaPredicted RBP28.32■■■□□ 2.12
CD99-211ENST00000623253 MAPKBP1O60336 1514 aa28.32■■■□□ 2.12
CD99-211ENST00000623253 CUL7Q14999 1698 aa28.32■■■□□ 2.12
CD99-211ENST00000623253 DIP2BQ9P265 1576 aa28.26■■■□□ 2.11
CD99-211ENST00000623253 CARMIL1Q5VZK9 1371 aa28.25■■■□□ 2.11
CD99-211ENST00000623253 PTPRGP23470 1445 aa28.23■■■□□ 2.11
CD99-211ENST00000623253 CARMIL2Q6F5E8 1435 aa28.17■■■□□ 2.1
CD99-211ENST00000623253 TNIKQ9UKE5 1360 aa28.13■■■□□ 2.09
CD99-211ENST00000623253 KDM6BO15054 1643 aa28.11■■■□□ 2.09
CD99-211ENST00000623253 TSPOAP1O95153 1857 aa28.1■■■□□ 2.09
CD99-211ENST00000623253 IQGAP2Q13576 1575 aa28.07■■■□□ 2.08
CD99-211ENST00000623253 ABCC2Q92887 1545 aa28.05■■■□□ 2.08
CD99-211ENST00000623253 ASXL2Q76L83 1435 aa28.01■■■□□ 2.07
CD99-211ENST00000623253 PLB1Q6P1J6 1458 aa27.98■■■□□ 2.07
CD99-211ENST00000623253 KDM4FA0A1W2PPD8 638 aa27.98■■■□□ 2.07
CD99-211ENST00000623253 UACAQ9BZF9 1416 aa27.98■■■□□ 2.07
CD99-211ENST00000623253 DISP1Q96F81 1524 aa27.96■■■□□ 2.07
CD99-211ENST00000623253 UHRF1BP1LA0JNW5 1464 aa27.95■■■□□ 2.06
CD99-211ENST00000623253 RAPGEF2Q9Y4G8 1499 aa27.95■■■□□ 2.06
CD99-211ENST00000623253 GLI2P10070 1586 aa27.89■■■□□ 2.05
CD99-211ENST00000623253 UGGT2Q9NYU1 1516 aa27.87■■■□□ 2.05
CD99-211ENST00000623253 KDM5BQ9UGL1 1544 aa27.83■■■□□ 2.05
CD99-211ENST00000623253 PPRC1Q5VV67 1664 aaKnown RBP27.82■■■□□ 2.04
CD99-211ENST00000623253 EPRSP07814 1512 aaKnown RBP27.82■■■□□ 2.04
CD99-211ENST00000623253 KIAA0556O60303 1618 aa27.81■■■□□ 2.04
CD99-211ENST00000623253 ZCCHC11Q5TAX3 1644 aaKnown RBP27.78■■■□□ 2.04
CD99-211ENST00000623253 COL17A1Q9UMD9 1497 aaPredicted RBP27.73■■■□□ 2.03
CD99-211ENST00000623253 TEX14Q8IWB6 1497 aa27.72■■■□□ 2.03
CD99-211ENST00000623253 MAP3K4Q9Y6R4 1608 aa27.72■■■□□ 2.03
CD99-211ENST00000623253 ADGRL1O94910 1474 aa27.68■■■□□ 2.02
CD99-211ENST00000623253 WDR7Q9Y4E6 1490 aa27.68■■■□□ 2.02
CD99-211ENST00000623253 KCNH8Q96L42 1107 aa27.67■■■□□ 2.02
CD99-211ENST00000623253 GOLGA3Q08378 1498 aa27.67■■■□□ 2.02
CD99-211ENST00000623253 CTTNBP2Q8WZ74 1663 aa27.66■■■□□ 2.02
CD99-211ENST00000623253 CD109Q6YHK3 1445 aa27.58■■■□□ 2
CD99-211ENST00000623253 PRXQ9BXM0 1461 aa27.57■■■□□ 2
CD99-211ENST00000623253 ABCA8O94911 1581 aa27.56■■■□□ 2
CD99-211ENST00000623253 FAM9AQ8IZU1 332 aaPredicted RBP27.56■■■□□ 2
CD99-211ENST00000623253 ARID3CA6NKF2 412 aa27.55■■■□□ 2
CD99-211ENST00000623253 P3H3Q8IVL6 736 aa27.55■■■□□ 2
CD99-211ENST00000623253 MAGI3Q5TCQ9 1506 aa27.5■■□□□ 1.99
CD99-211ENST00000623253 CFAP43Q8NDM7 1665 aa27.48■■□□□ 1.99
CD99-211ENST00000623253 ILDR1Q86SU0 546 aaPredicted RBP27.41■■□□□ 1.98
CD99-211ENST00000623253 CSRNP3Q8WYN3 585 aa27.39■■□□□ 1.98
CD99-211ENST00000623253 ATP10BO94823 1461 aa27.38■■□□□ 1.97
CD99-211ENST00000623253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.36■■□□□ 1.97
CD99-211ENST00000623253 HNRNPUL2Q1KMD3 747 aaKnown RBP27.36■■□□□ 1.97
CD99-211ENST00000623253 HECW2Q9P2P5 1572 aa27.35■■□□□ 1.97
CD99-211ENST00000623253 RANGAP1P46060 587 aaPredicted RBP27.35■■□□□ 1.97
CD99-211ENST00000623253 ARAP3Q8WWN8 1544 aa27.29■■□□□ 1.96
CD99-211ENST00000623253 KIF21BO75037 1637 aa27.27■■□□□ 1.96
CD99-211ENST00000623253 SAMD9Q5K651 1589 aa27.26■■□□□ 1.96
CD99-211ENST00000623253 RAPGEF6Q8TEU7 1601 aa27.24■■□□□ 1.95
CD99-211ENST00000623253 RAPGEF3O95398 923 aa27.24■■□□□ 1.95
CD99-211ENST00000623253 ABCA9Q8IUA7 1624 aa27.23■■□□□ 1.95
CD99-211ENST00000623253 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
CD99-211ENST00000623253 CHIC1Q5VXU3 224 aa27.21■■□□□ 1.95
CD99-211ENST00000623253 FHOD3Q2V2M9 1422 aa27.16■■□□□ 1.94
CD99-211ENST00000623253 NUP153P49790 1475 aaKnown RBP27.15■■□□□ 1.94
CD99-211ENST00000623253 NEO1Q92859 1461 aa27.15■■□□□ 1.94
CD99-211ENST00000623253 EEA1Q15075 1411 aa27.15■■□□□ 1.94
CD99-211ENST00000623253 PLEKHD1A6NEE1 506 aa27.13■■□□□ 1.93
CD99-211ENST00000623253 ARID4BQ4LE39 1312 aaPredicted RBP27.13■■□□□ 1.93
CD99-211ENST00000623253 PTPRMP28827 1452 aa27.06■■□□□ 1.92
CD99-211ENST00000623253 ADAMTSL3P82987 1691 aa27.03■■□□□ 1.92
CD99-211ENST00000623253 FRMPD1Q5SYB0 1578 aa27.02■■□□□ 1.92
CD99-211ENST00000623253 EHMT2Q96KQ7 1210 aa27.01■■□□□ 1.91
CD99-211ENST00000623253 DENND4BO75064 1496 aaPredicted RBP27■■□□□ 1.91
CD99-211ENST00000623253 AKNAQ7Z591 1439 aa26.99■■□□□ 1.91
CD99-211ENST00000623253 FANCAO15360 1455 aa26.98■■□□□ 1.91
CD99-211ENST00000623253 EFCAB5A4FU69 1503 aa26.96■■□□□ 1.91
CD99-211ENST00000623253 BCORL1Q5H9F3 1711 aa26.96■■□□□ 1.91
CD99-211ENST00000623253 ATP1B4Q9UN42 357 aaPredicted RBP26.95■■□□□ 1.9
CD99-211ENST00000623253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.95■■□□□ 1.9
CD99-211ENST00000623253 MADDQ8WXG6 1647 aa26.94■■□□□ 1.9
CD99-211ENST00000623253 PLPPR3Q6T4P5 718 aa26.93■■□□□ 1.9
CD99-211ENST00000623253 UBTFP17480 764 aaKnown RBP26.92■■□□□ 1.9
CD99-211ENST00000623253 ARHGEF40Q8TER5 1519 aa26.9■■□□□ 1.9
CD99-211ENST00000623253 CFAP74Q9C0B2 1584 aa26.9■■□□□ 1.9
CD99-211ENST00000623253 CDK13Q14004 1512 aaKnown RBP26.9■■□□□ 1.9
CD99-211ENST00000623253 TTC37Q6PGP7 1564 aa26.89■■□□□ 1.9
CD99-211ENST00000623253 RICTORQ6R327 1708 aa26.89■■□□□ 1.9
CD99-211ENST00000623253 POGZQ7Z3K3 1410 aa26.84■■□□□ 1.89
CD99-211ENST00000623253 FBXO41Q8TF61 875 aa26.84■■□□□ 1.89
CD99-211ENST00000623253 RIMS1Q86UR5 1692 aaKnown RBP26.84■■□□□ 1.89
CD99-211ENST00000623253 PCF11O94913 1555 aaKnown RBP26.84■■□□□ 1.89
CD99-211ENST00000623253 YEATS2Q9ULM3 1422 aa26.83■■□□□ 1.89
CD99-211ENST00000623253 MLECQ14165 292 aa26.83■■□□□ 1.89
CD99-211ENST00000623253 ZFYVE16Q7Z3T8 1539 aa26.82■■□□□ 1.88
CD99-211ENST00000623253 SCAPERQ9BY12 1400 aa26.81■■□□□ 1.88
CD99-211ENST00000623253 LMTK3Q96Q04 1460 aa26.81■■□□□ 1.88
CD99-211ENST00000623253 PLCH2O75038 1416 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms