RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 MAPKBP1O60336 1514 aa27.06■■□□□ 1.92
SNX12-206ENST00000622259 JPH4Q96JJ6 628 aa27.03■■□□□ 1.92
SNX12-206ENST00000622259 NPM1P06748 294 aaKnown RBP eCLIP26.99■■□□□ 1.91
SNX12-206ENST00000622259 TSPOAP1O95153 1857 aa26.99■■□□□ 1.91
SNX12-206ENST00000622259 ADCY10Q96PN6 1610 aa26.98■■□□□ 1.91
SNX12-206ENST00000622259 WRNQ14191 1432 aaPredicted RBP eCLIP26.97■■□□□ 1.91
SNX12-206ENST00000622259 ERICH3Q5RHP9 1530 aa26.9■■□□□ 1.9
SNX12-206ENST00000622259 ADGRL1O94910 1474 aa26.86■■□□□ 1.89
SNX12-206ENST00000622259 RUSC2Q8N2Y8 1516 aa26.85■■□□□ 1.89
SNX12-206ENST00000622259 HECW2Q9P2P5 1572 aa26.82■■□□□ 1.88
SNX12-206ENST00000622259 BIVM-ERCC5R4GMW8 1640 aa26.79■■□□□ 1.88
SNX12-206ENST00000622259 TOP2BQ02880 1626 aa26.78■■□□□ 1.88
SNX12-206ENST00000622259 PPRC1Q5VV67 1664 aaKnown RBP26.72■■□□□ 1.87
SNX12-206ENST00000622259 COL17A1Q9UMD9 1497 aaPredicted RBP26.67■■□□□ 1.86
SNX12-206ENST00000622259 KIAA0586Q9BVV6 1533 aa26.59■■□□□ 1.85
SNX12-206ENST00000622259 GLI2P10070 1586 aa26.58■■□□□ 1.85
SNX12-206ENST00000622259 ASXL2Q76L83 1435 aa26.57■■□□□ 1.84
SNX12-206ENST00000622259 TTBK1Q5TCY1 1321 aaPredicted RBP26.55■■□□□ 1.84
SNX12-206ENST00000622259 PTPRGP23470 1445 aa26.55■■□□□ 1.84
SNX12-206ENST00000622259 ABCC2Q92887 1545 aa26.54■■□□□ 1.84
SNX12-206ENST00000622259 FBXO41Q8TF61 875 aa26.53■■□□□ 1.84
SNX12-206ENST00000622259 PLB1Q6P1J6 1458 aa26.5■■□□□ 1.83
SNX12-206ENST00000622259 CUL7Q14999 1698 aa26.45■■□□□ 1.82
SNX12-206ENST00000622259 MAP3K4Q9Y6R4 1608 aa26.42■■□□□ 1.82
SNX12-206ENST00000622259 EPRSP07814 1512 aaKnown RBP26.41■■□□□ 1.82
SNX12-206ENST00000622259 TNIKQ9UKE5 1360 aa26.41■■□□□ 1.82
SNX12-206ENST00000622259 IGF1RP08069 1367 aa26.4■■□□□ 1.82
SNX12-206ENST00000622259 UHRF1BP1LA0JNW5 1464 aa26.36■■□□□ 1.81
SNX12-206ENST00000622259 TEX14Q8IWB6 1497 aa26.34■■□□□ 1.81
SNX12-206ENST00000622259 UACAQ9BZF9 1416 aa26.31■■□□□ 1.8
SNX12-206ENST00000622259 SUPT5HO00267 1087 aaKnown RBP26.31■■□□□ 1.8
SNX12-206ENST00000622259 CARMIL2Q6F5E8 1435 aa26.31■■□□□ 1.8
SNX12-206ENST00000622259 KDM5BQ9UGL1 1544 aa26.28■■□□□ 1.8
SNX12-206ENST00000622259 ZCCHC11Q5TAX3 1644 aaKnown RBP26.23■■□□□ 1.79
SNX12-206ENST00000622259 DISP1Q96F81 1524 aa26.21■■□□□ 1.79
SNX12-206ENST00000622259 KIF27Q86VH2 1401 aa26.2■■□□□ 1.78
SNX12-206ENST00000622259 IQGAP2Q13576 1575 aa26.19■■□□□ 1.78
SNX12-206ENST00000622259 KIF21BO75037 1637 aa26.17■■□□□ 1.78
SNX12-206ENST00000622259 CARMIL1Q5VZK9 1371 aa26.17■■□□□ 1.78
SNX12-206ENST00000622259 LMTK3Q96Q04 1460 aa26.12■■□□□ 1.77
SNX12-206ENST00000622259 WDR7Q9Y4E6 1490 aa26.12■■□□□ 1.77
SNX12-206ENST00000622259 MAGI3Q5TCQ9 1506 aa26.09■■□□□ 1.77
SNX12-206ENST00000622259 CD109Q6YHK3 1445 aa26.08■■□□□ 1.77
SNX12-206ENST00000622259 PTPRMP28827 1452 aa26.07■■□□□ 1.76
SNX12-206ENST00000622259 CFAP43Q8NDM7 1665 aa26.03■■□□□ 1.76
SNX12-206ENST00000622259 ADAMTSL3P82987 1691 aa26.01■■□□□ 1.75
SNX12-206ENST00000622259 KCNH8Q96L42 1107 aa26.01■■□□□ 1.75
SNX12-206ENST00000622259 UGGT2Q9NYU1 1516 aa26■■□□□ 1.75
SNX12-206ENST00000622259 KIAA0556O60303 1618 aa25.99■■□□□ 1.75
SNX12-206ENST00000622259 ILDR2Q71H61 639 aa25.97■■□□□ 1.75
SNX12-206ENST00000622259 PCF11O94913 1555 aaKnown RBP25.96■■□□□ 1.75
SNX12-206ENST00000622259 ARAP3Q8WWN8 1544 aa25.92■■□□□ 1.74
SNX12-206ENST00000622259 SOCS7O14512 581 aa25.87■■□□□ 1.73
SNX12-206ENST00000622259 MADDQ8WXG6 1647 aa25.86■■□□□ 1.73
SNX12-206ENST00000622259 BCORL1Q5H9F3 1711 aa25.84■■□□□ 1.73
SNX12-206ENST00000622259 ABCA8O94911 1581 aa25.83■■□□□ 1.73
SNX12-206ENST00000622259 HSPA2P54652 639 aa25.82■■□□□ 1.72
SNX12-206ENST00000622259 DISP3Q9P2K9 1392 aa25.82■■□□□ 1.72
SNX12-206ENST00000622259 RAPGEF3O95398 923 aa25.81■■□□□ 1.72
SNX12-206ENST00000622259 CERKQ8TCT0 537 aa25.81■■□□□ 1.72
SNX12-206ENST00000622259 RAPGEF2Q9Y4G8 1499 aa25.79■■□□□ 1.72
SNX12-206ENST00000622259 ARID4BQ4LE39 1312 aaPredicted RBP25.74■■□□□ 1.71
SNX12-206ENST00000622259 RIMS1Q86UR5 1692 aaKnown RBP25.73■■□□□ 1.71
SNX12-206ENST00000622259 FRMPD1Q5SYB0 1578 aa25.71■■□□□ 1.71
SNX12-206ENST00000622259 ARID3CA6NKF2 412 aa25.7■■□□□ 1.7
SNX12-206ENST00000622259 PHLDB1Q86UU1 1377 aa25.68■■□□□ 1.7
SNX12-206ENST00000622259 PLPPR3Q6T4P5 718 aa25.67■■□□□ 1.7
SNX12-206ENST00000622259 ABCA9Q8IUA7 1624 aa25.66■■□□□ 1.7
SNX12-206ENST00000622259 ATP10BO94823 1461 aa25.63■■□□□ 1.69
SNX12-206ENST00000622259 GOLGA3Q08378 1498 aa25.63■■□□□ 1.69
SNX12-206ENST00000622259 CTTNBP2Q8WZ74 1663 aa25.61■■□□□ 1.69
SNX12-206ENST00000622259 NEO1Q92859 1461 aa25.61■■□□□ 1.69
SNX12-206ENST00000622259 ARHGEF40Q8TER5 1519 aa25.58■■□□□ 1.68
SNX12-206ENST00000622259 SIGLEC1Q9BZZ2 1709 aa25.54■■□□□ 1.68
SNX12-206ENST00000622259 SPATA31D1Q6ZQQ2 1576 aa25.53■■□□□ 1.68
SNX12-206ENST00000622259 RICTORQ6R327 1708 aa25.48■■□□□ 1.67
SNX12-206ENST00000622259 P3H3Q8IVL6 736 aa25.47■■□□□ 1.67
SNX12-206ENST00000622259 DENND4BO75064 1496 aaPredicted RBP25.44■■□□□ 1.66
SNX12-206ENST00000622259 MLECQ14165 292 aa25.43■■□□□ 1.66
SNX12-206ENST00000622259 FANCAO15360 1455 aa25.42■■□□□ 1.66
SNX12-206ENST00000622259 FHOD3Q2V2M9 1422 aa25.42■■□□□ 1.66
SNX12-206ENST00000622259 POGZQ7Z3K3 1410 aa25.42■■□□□ 1.66
SNX12-206ENST00000622259 YEATS2Q9ULM3 1422 aa25.42■■□□□ 1.66
SNX12-206ENST00000622259 AKNAQ7Z591 1439 aa25.4■■□□□ 1.66
SNX12-206ENST00000622259 TTC37Q6PGP7 1564 aa25.39■■□□□ 1.66
SNX12-206ENST00000622259 FER1L4A9Z1Z3 1794 aa25.39■■□□□ 1.66
SNX12-206ENST00000622259 STRCQ7RTU9 1775 aa25.39■■□□□ 1.66
SNX12-206ENST00000622259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.35■■□□□ 1.65
SNX12-206ENST00000622259 HNRNPUL2Q1KMD3 747 aaKnown RBP25.35■■□□□ 1.65
SNX12-206ENST00000622259 ZFYVE16Q7Z3T8 1539 aa25.35■■□□□ 1.65
SNX12-206ENST00000622259 ZMYM4Q5VZL5 1548 aa25.34■■□□□ 1.65
SNX12-206ENST00000622259 PREX1Q8TCU6 1659 aa25.34■■□□□ 1.65
SNX12-206ENST00000622259 RAPGEF6Q8TEU7 1601 aa25.33■■□□□ 1.65
SNX12-206ENST00000622259 CEBPAP49715 358 aaPredicted RBP25.32■■□□□ 1.64
SNX12-206ENST00000622259 PRXQ9BXM0 1461 aa25.31■■□□□ 1.64
SNX12-206ENST00000622259 EFCAB5A4FU69 1503 aa25.31■■□□□ 1.64
SNX12-206ENST00000622259 FAM9AQ8IZU1 332 aaPredicted RBP25.29■■□□□ 1.64
SNX12-206ENST00000622259 ARHGEF12Q9NZN5 1544 aa25.28■■□□□ 1.64
SNX12-206ENST00000622259 DMRT2Q9Y5R5 561 aa25.28■■□□□ 1.64
SNX12-206ENST00000622259 NUP153P49790 1475 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms