RNA–Protein interactions for RNA: ENST00000622132.4

ABCB1-211, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-211ENST00000622132 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
ABCB1-211ENST00000622132 OSCARQ8IYS5 282 aa12.46□□□□□ -0.41
ABCB1-211ENST00000622132 IFT140Q96RY7 1462 aa12.46□□□□□ -0.41
ABCB1-211ENST00000622132 DNMBPQ6XZF7 1577 aa12.46□□□□□ -0.41
ABCB1-211ENST00000622132 CHIC2Q9UKJ5 165 aa12.46□□□□□ -0.41
ABCB1-211ENST00000622132 TSPY4P0CV99 314 aa12.45□□□□□ -0.42
ABCB1-211ENST00000622132 TSPY10P0CW01 314 aa12.45□□□□□ -0.42
ABCB1-211ENST00000622132 TOP2BQ02880 1626 aa12.45□□□□□ -0.42
ABCB1-211ENST00000622132 GRIN2BQ13224 1484 aa12.44□□□□□ -0.42
ABCB1-211ENST00000622132 NEUROD1Q13562 356 aa12.43□□□□□ -0.42
ABCB1-211ENST00000622132 CFDP1Q9UEE9 299 aaPredicted RBP12.42□□□□□ -0.42
ABCB1-211ENST00000622132 VPS8Q8N3P4 1428 aa12.41□□□□□ -0.42
ABCB1-211ENST00000622132 ERICH6Q7L0X2 663 aa12.41□□□□□ -0.42
ABCB1-211ENST00000622132 FMN1Q68DA7 1419 aa12.41□□□□□ -0.42
ABCB1-211ENST00000622132 HRCP23327 699 aa12.41□□□□□ -0.42
ABCB1-211ENST00000622132 FHOD3Q2V2M9 1422 aa12.4□□□□□ -0.42
ABCB1-211ENST00000622132 URB2Q14146 1524 aaKnown RBP12.38□□□□□ -0.43
ABCB1-211ENST00000622132 ESF1Q9H501 851 aaKnown RBP12.37□□□□□ -0.43
ABCB1-211ENST00000622132 POLR3GLQ9BT43 218 aa12.34□□□□□ -0.43
ABCB1-211ENST00000622132 ABCA10Q8WWZ4 1543 aa12.34□□□□□ -0.43
ABCB1-211ENST00000622132 CCNB3Q8WWL7 1395 aa12.34□□□□□ -0.43
ABCB1-211ENST00000622132 PTPRGP23470 1445 aa12.33□□□□□ -0.43
ABCB1-211ENST00000622132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.44
ABCB1-211ENST00000622132 KANK4Q5T7N3 995 aaPredicted RBP12.33□□□□□ -0.44
ABCB1-211ENST00000622132 RRP7BPQ9NSQ0 103 aa12.33□□□□□ -0.44
ABCB1-211ENST00000622132 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
ABCB1-211ENST00000622132 TRHP20396 242 aaPredicted RBP12.32□□□□□ -0.44
ABCB1-211ENST00000622132 SNAPC4Q5SXM2 1469 aa12.32□□□□□ -0.44
ABCB1-211ENST00000622132 ZNF326Q5BKZ1 582 aaKnown RBP12.32□□□□□ -0.44
ABCB1-211ENST00000622132 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
ABCB1-211ENST00000622132 PLPPR3Q6T4P5 718 aa12.27□□□□□ -0.45
ABCB1-211ENST00000622132 ZNF608Q9ULD9 1512 aaPredicted RBP12.27□□□□□ -0.45
ABCB1-211ENST00000622132 ERICH3Q5RHP9 1530 aa12.26□□□□□ -0.45
ABCB1-211ENST00000622132 KIF21BO75037 1637 aa12.24□□□□□ -0.45
ABCB1-211ENST00000622132 CHGAP10645 457 aaKnown RBP12.23□□□□□ -0.45
ABCB1-211ENST00000622132 ARHGAP35Q9NRY4 1499 aa12.22□□□□□ -0.45
ABCB1-211ENST00000622132 PRG4Q92954 1404 aaPredicted RBP12.22□□□□□ -0.45
ABCB1-211ENST00000622132 EFCAB2Q5VUJ9 269 aa12.22□□□□□ -0.45
ABCB1-211ENST00000622132 BIVM-ERCC5R4GMW8 1640 aa12.21□□□□□ -0.45
ABCB1-211ENST00000622132 BCANQ96GW7 911 aa12.21□□□□□ -0.45
ABCB1-211ENST00000622132 STAG3Q9UJ98 1225 aa12.21□□□□□ -0.45
ABCB1-211ENST00000622132 SLC4A1APQ9BWU0 796 aaKnown RBP12.21□□□□□ -0.46
ABCB1-211ENST00000622132 SYNJ2O15056 1496 aa12.19□□□□□ -0.46
ABCB1-211ENST00000622132 ARID4BQ4LE39 1312 aaPredicted RBP12.19□□□□□ -0.46
ABCB1-211ENST00000622132 MAGI1Q96QZ7 1491 aaPredicted RBP12.19□□□□□ -0.46
ABCB1-211ENST00000622132 CENPBP07199 599 aaPredicted RBP12.18□□□□□ -0.46
ABCB1-211ENST00000622132 CNGB1Q14028 1251 aaPredicted RBP12.18□□□□□ -0.46
ABCB1-211ENST00000622132 CCDC18Q5T9S5 1454 aa12.18□□□□□ -0.46
ABCB1-211ENST00000622132 TONSLQ96HA7 1378 aa12.17□□□□□ -0.46
ABCB1-211ENST00000622132 KIAA0586Q9BVV6 1533 aa12.17□□□□□ -0.46
ABCB1-211ENST00000622132 KIF21AQ7Z4S6 1674 aa12.17□□□□□ -0.46
ABCB1-211ENST00000622132 GRIN2AQ12879 1464 aa12.15□□□□□ -0.46
ABCB1-211ENST00000622132 PRKCSHP14314 528 aaPredicted RBP12.15□□□□□ -0.46
ABCB1-211ENST00000622132 ACIN1Q9UKV3 1341 aaKnown RBP12.14□□□□□ -0.47
ABCB1-211ENST00000622132 BCL11AQ9H165 835 aa12.13□□□□□ -0.47
ABCB1-211ENST00000622132 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
ABCB1-211ENST00000622132 CUL7Q14999 1698 aa12.12□□□□□ -0.47
ABCB1-211ENST00000622132 HNRNPMP52272 730 aaKnown RBP eCLIP12.12□□□□□ -0.47
ABCB1-211ENST00000622132 WDR62O43379 1518 aa12.1□□□□□ -0.47
ABCB1-211ENST00000622132 CASKIN1Q8WXD9 1431 aa12.1□□□□□ -0.47
ABCB1-211ENST00000622132 EFCAB5A4FU69 1503 aa12.09□□□□□ -0.47
ABCB1-211ENST00000622132 PRDM2Q13029 1718 aa12.09□□□□□ -0.47
ABCB1-211ENST00000622132 KDM2AQ9Y2K7 1162 aa12.08□□□□□ -0.48
ABCB1-211ENST00000622132 IQGAP2Q13576 1575 aa12.08□□□□□ -0.48
ABCB1-211ENST00000622132 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
ABCB1-211ENST00000622132 FAM69CQ0P6D2 419 aa12.07□□□□□ -0.48
ABCB1-211ENST00000622132 MLECQ14165 292 aa12.07□□□□□ -0.48
ABCB1-211ENST00000622132 YTHDC1Q96MU7 727 aaKnown RBP12.07□□□□□ -0.48
ABCB1-211ENST00000622132 GGT6Q6P531 493 aa12.06□□□□□ -0.48
ABCB1-211ENST00000622132 SPAG9O60271 1321 aaKnown RBP12.06□□□□□ -0.48
ABCB1-211ENST00000622132 RGL3Q3MIN7 710 aa12.05□□□□□ -0.48
ABCB1-211ENST00000622132 ANKRD30AQ9BXX3 1397 aa12.04□□□□□ -0.48
ABCB1-211ENST00000622132 DIEXFQ68CQ4 756 aaKnown RBP12.03□□□□□ -0.48
ABCB1-211ENST00000622132 FYCO1Q9BQS8 1478 aa12.03□□□□□ -0.48
ABCB1-211ENST00000622132 SETD5Q9C0A6 1442 aa12.03□□□□□ -0.48
ABCB1-211ENST00000622132 ZNF316A6NFI3 1004 aaPredicted RBP12.02□□□□□ -0.49
ABCB1-211ENST00000622132 KANK1Q14678 1352 aa12.02□□□□□ -0.49
ABCB1-211ENST00000622132 LRRC9Q6ZRR7 1453 aa12.01□□□□□ -0.49
ABCB1-211ENST00000622132 UACAQ9BZF9 1416 aa12.01□□□□□ -0.49
ABCB1-211ENST00000622132 KIF3BO15066 747 aa12□□□□□ -0.49
ABCB1-211ENST00000622132 SCAF1Q9H7N4 1312 aaKnown RBP12□□□□□ -0.49
ABCB1-211ENST00000622132 SENP3Q9H4L4 574 aaPredicted RBP12□□□□□ -0.49
ABCB1-211ENST00000622132 EIF4G3O43432 1585 aaKnown RBP11.99□□□□□ -0.49
ABCB1-211ENST00000622132 PPP1R15AO75807 674 aaPredicted RBP11.99□□□□□ -0.49
ABCB1-211ENST00000622132 ZNF644Q9H582 1327 aaPredicted RBP11.99□□□□□ -0.49
ABCB1-211ENST00000622132 SIN3AQ96ST3 1273 aa11.98□□□□□ -0.49
ABCB1-211ENST00000622132 PHLDB1Q86UU1 1377 aa11.98□□□□□ -0.49
ABCB1-211ENST00000622132 NUP155O75694 1391 aa11.97□□□□□ -0.49
ABCB1-211ENST00000622132 RAB3GAP2Q9H2M9 1393 aa11.97□□□□□ -0.49
ABCB1-211ENST00000622132 MYOM3Q5VTT5 1437 aa11.97□□□□□ -0.49
ABCB1-211ENST00000622132 PKD2Q13563 968 aa11.97□□□□□ -0.49
ABCB1-211ENST00000622132 PLB1Q6P1J6 1458 aa11.97□□□□□ -0.49
ABCB1-211ENST00000622132 NCOA2Q15596 1464 aa11.96□□□□□ -0.49
ABCB1-211ENST00000622132 FGD6Q6ZV73 1430 aa11.95□□□□□ -0.5
ABCB1-211ENST00000622132 TROQ12816 1431 aaPredicted RBP11.95□□□□□ -0.5
ABCB1-211ENST00000622132 ADAMTS12P58397 1594 aa11.95□□□□□ -0.5
ABCB1-211ENST00000622132 FOXD1Q16676 465 aa11.94□□□□□ -0.5
ABCB1-211ENST00000622132 HECW1Q76N89 1606 aa11.93□□□□□ -0.5
ABCB1-211ENST00000622132 MPHOSPH9Q99550 1183 aa11.93□□□□□ -0.5
ABCB1-211ENST00000622132 EPRSP07814 1512 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms