RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 RUSC2Q8N2Y8 1516 aa27.88■■■□□ 2.05
SNHG28-203ENST00000621242 FAM69CQ0P6D2 419 aa27.87■■■□□ 2.05
SNHG28-203ENST00000621242 ABCC10Q5T3U5 1492 aa27.85■■■□□ 2.05
SNHG28-203ENST00000621242 NPM1P06748 294 aaKnown RBP eCLIP27.84■■■□□ 2.05
SNHG28-203ENST00000621242 MAPKBP1O60336 1514 aa27.8■■■□□ 2.04
SNHG28-203ENST00000621242 ADCY10Q96PN6 1610 aa27.79■■■□□ 2.04
SNHG28-203ENST00000621242 DIP2BQ9P265 1576 aa27.78■■■□□ 2.04
SNHG28-203ENST00000621242 TSPOAP1O95153 1857 aa27.7■■■□□ 2.03
SNHG28-203ENST00000621242 KIAA0586Q9BVV6 1533 aa27.68■■■□□ 2.02
SNHG28-203ENST00000621242 KDM6BO15054 1643 aa27.67■■■□□ 2.02
SNHG28-203ENST00000621242 IGF1RP08069 1367 aa27.64■■■□□ 2.02
SNHG28-203ENST00000621242 CUL7Q14999 1698 aa27.61■■■□□ 2.01
SNHG28-203ENST00000621242 KDM4FA0A1W2PPD8 638 aa27.6■■■□□ 2.01
SNHG28-203ENST00000621242 KIF27Q86VH2 1401 aa27.58■■■□□ 2
SNHG28-203ENST00000621242 PTPRGP23470 1445 aa27.53■■■□□ 2
SNHG28-203ENST00000621242 TTBK1Q5TCY1 1321 aaPredicted RBP27.52■■■□□ 2
SNHG28-203ENST00000621242 CARMIL1Q5VZK9 1371 aa27.44■■□□□ 1.98
SNHG28-203ENST00000621242 ABCC2Q92887 1545 aa27.43■■□□□ 1.98
SNHG28-203ENST00000621242 TNIKQ9UKE5 1360 aa27.43■■□□□ 1.98
SNHG28-203ENST00000621242 CARMIL2Q6F5E8 1435 aa27.42■■□□□ 1.98
SNHG28-203ENST00000621242 PPRC1Q5VV67 1664 aaKnown RBP27.4■■□□□ 1.98
SNHG28-203ENST00000621242 ASXL2Q76L83 1435 aa27.4■■□□□ 1.98
SNHG28-203ENST00000621242 GLI2P10070 1586 aa27.37■■□□□ 1.97
SNHG28-203ENST00000621242 IQGAP2Q13576 1575 aa27.37■■□□□ 1.97
SNHG28-203ENST00000621242 PLB1Q6P1J6 1458 aa27.37■■□□□ 1.97
SNHG28-203ENST00000621242 UHRF1BP1LA0JNW5 1464 aa27.32■■□□□ 1.96
SNHG28-203ENST00000621242 UACAQ9BZF9 1416 aa27.3■■□□□ 1.96
SNHG28-203ENST00000621242 DISP1Q96F81 1524 aa27.28■■□□□ 1.96
SNHG28-203ENST00000621242 ADGRL1O94910 1474 aa27.25■■□□□ 1.95
SNHG28-203ENST00000621242 COL17A1Q9UMD9 1497 aaPredicted RBP27.24■■□□□ 1.95
SNHG28-203ENST00000621242 EPRSP07814 1512 aaKnown RBP27.23■■□□□ 1.95
SNHG28-203ENST00000621242 MAP3K4Q9Y6R4 1608 aa27.23■■□□□ 1.95
SNHG28-203ENST00000621242 KDM5BQ9UGL1 1544 aa27.22■■□□□ 1.95
SNHG28-203ENST00000621242 ILDR1Q86SU0 546 aaPredicted RBP27.22■■□□□ 1.95
SNHG28-203ENST00000621242 ZCCHC11Q5TAX3 1644 aaKnown RBP27.19■■□□□ 1.94
SNHG28-203ENST00000621242 UGGT2Q9NYU1 1516 aa27.16■■□□□ 1.94
SNHG28-203ENST00000621242 TEX14Q8IWB6 1497 aa27.15■■□□□ 1.94
SNHG28-203ENST00000621242 KIAA0556O60303 1618 aa27.14■■□□□ 1.94
SNHG28-203ENST00000621242 RAPGEF2Q9Y4G8 1499 aa27.13■■□□□ 1.93
SNHG28-203ENST00000621242 WDR7Q9Y4E6 1490 aa27.04■■□□□ 1.92
SNHG28-203ENST00000621242 HECW2Q9P2P5 1572 aa27.04■■□□□ 1.92
SNHG28-203ENST00000621242 CTTNBP2Q8WZ74 1663 aa26.99■■□□□ 1.91
SNHG28-203ENST00000621242 CFAP43Q8NDM7 1665 aa26.96■■□□□ 1.91
SNHG28-203ENST00000621242 KCNH8Q96L42 1107 aa26.95■■□□□ 1.9
SNHG28-203ENST00000621242 CD109Q6YHK3 1445 aa26.94■■□□□ 1.9
SNHG28-203ENST00000621242 MAGI3Q5TCQ9 1506 aa26.93■■□□□ 1.9
SNHG28-203ENST00000621242 ABCA8O94911 1581 aa26.91■■□□□ 1.9
SNHG28-203ENST00000621242 GOLGA3Q08378 1498 aa26.9■■□□□ 1.9
SNHG28-203ENST00000621242 KIF21BO75037 1637 aa26.83■■□□□ 1.89
SNHG28-203ENST00000621242 ARID3CA6NKF2 412 aa26.74■■□□□ 1.87
SNHG28-203ENST00000621242 ARAP3Q8WWN8 1544 aa26.74■■□□□ 1.87
SNHG28-203ENST00000621242 PRXQ9BXM0 1461 aa26.74■■□□□ 1.87
SNHG28-203ENST00000621242 ATP10BO94823 1461 aa26.69■■□□□ 1.86
SNHG28-203ENST00000621242 P3H3Q8IVL6 736 aa26.69■■□□□ 1.86
SNHG28-203ENST00000621242 FAM9AQ8IZU1 332 aaPredicted RBP26.66■■□□□ 1.86
SNHG28-203ENST00000621242 ABCA9Q8IUA7 1624 aa26.65■■□□□ 1.86
SNHG28-203ENST00000621242 ADAMTSL3P82987 1691 aa26.62■■□□□ 1.85
SNHG28-203ENST00000621242 PHLDB1Q86UU1 1377 aa26.6■■□□□ 1.85
SNHG28-203ENST00000621242 RAPGEF3O95398 923 aa26.6■■□□□ 1.85
SNHG28-203ENST00000621242 PTPRMP28827 1452 aa26.6■■□□□ 1.85
SNHG28-203ENST00000621242 RAPGEF6Q8TEU7 1601 aa26.55■■□□□ 1.84
SNHG28-203ENST00000621242 FBXO41Q8TF61 875 aa26.55■■□□□ 1.84
SNHG28-203ENST00000621242 SAMD9Q5K651 1589 aa26.54■■□□□ 1.84
SNHG28-203ENST00000621242 NEO1Q92859 1461 aa26.54■■□□□ 1.84
SNHG28-203ENST00000621242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.53■■□□□ 1.84
SNHG28-203ENST00000621242 HNRNPUL2Q1KMD3 747 aaKnown RBP26.53■■□□□ 1.84
SNHG28-203ENST00000621242 BCORL1Q5H9F3 1711 aa26.53■■□□□ 1.84
SNHG28-203ENST00000621242 FRMPD1Q5SYB0 1578 aa26.5■■□□□ 1.83
SNHG28-203ENST00000621242 MADDQ8WXG6 1647 aa26.49■■□□□ 1.83
SNHG28-203ENST00000621242 ARID4BQ4LE39 1312 aaPredicted RBP26.48■■□□□ 1.83
SNHG28-203ENST00000621242 NUP153P49790 1475 aaKnown RBP26.43■■□□□ 1.82
SNHG28-203ENST00000621242 CSRNP3Q8WYN3 585 aa26.43■■□□□ 1.82
SNHG28-203ENST00000621242 PCF11O94913 1555 aaKnown RBP26.42■■□□□ 1.82
SNHG28-203ENST00000621242 RIMS1Q86UR5 1692 aaKnown RBP26.4■■□□□ 1.82
SNHG28-203ENST00000621242 LMTK3Q96Q04 1460 aa26.39■■□□□ 1.82
SNHG28-203ENST00000621242 RANGAP1P46060 587 aaPredicted RBP26.39■■□□□ 1.82
SNHG28-203ENST00000621242 RICTORQ6R327 1708 aa26.39■■□□□ 1.81
SNHG28-203ENST00000621242 ARHGEF40Q8TER5 1519 aa26.38■■□□□ 1.81
SNHG28-203ENST00000621242 FHOD3Q2V2M9 1422 aa26.36■■□□□ 1.81
SNHG28-203ENST00000621242 DENND4BO75064 1496 aaPredicted RBP26.36■■□□□ 1.81
SNHG28-203ENST00000621242 AKNAQ7Z591 1439 aa26.34■■□□□ 1.81
SNHG28-203ENST00000621242 PLEKHD1A6NEE1 506 aa26.34■■□□□ 1.81
SNHG28-203ENST00000621242 FANCAO15360 1455 aa26.3■■□□□ 1.8
SNHG28-203ENST00000621242 CFAP74Q9C0B2 1584 aa26.3■■□□□ 1.8
SNHG28-203ENST00000621242 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.29■■□□□ 1.8
SNHG28-203ENST00000621242 PLPPR3Q6T4P5 718 aa26.28■■□□□ 1.8
SNHG28-203ENST00000621242 HSPA2P54652 639 aa26.27■■□□□ 1.8
SNHG28-203ENST00000621242 SIGLEC1Q9BZZ2 1709 aa26.27■■□□□ 1.8
SNHG28-203ENST00000621242 TTC37Q6PGP7 1564 aa26.26■■□□□ 1.79
SNHG28-203ENST00000621242 ZMYM4Q5VZL5 1548 aa26.24■■□□□ 1.79
SNHG28-203ENST00000621242 POGZQ7Z3K3 1410 aa26.24■■□□□ 1.79
SNHG28-203ENST00000621242 ZFYVE16Q7Z3T8 1539 aa26.23■■□□□ 1.79
SNHG28-203ENST00000621242 YEATS2Q9ULM3 1422 aa26.22■■□□□ 1.79
SNHG28-203ENST00000621242 EFCAB5A4FU69 1503 aa26.2■■□□□ 1.79
SNHG28-203ENST00000621242 EEA1Q15075 1411 aa26.19■■□□□ 1.78
SNHG28-203ENST00000621242 HECW1Q76N89 1606 aa26.18■■□□□ 1.78
SNHG28-203ENST00000621242 FER1L4A9Z1Z3 1794 aa26.18■■□□□ 1.78
SNHG28-203ENST00000621242 MLECQ14165 292 aa26.18■■□□□ 1.78
SNHG28-203ENST00000621242 MAGI2Q86UL8 1455 aa26.17■■□□□ 1.78
SNHG28-203ENST00000621242 CDK13Q14004 1512 aaKnown RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms