RNA–Protein interactions for RNA: ENST00000620902.1

MALAT1-217, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 352 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-217ENST00000620902 SPOCK2Q92563 424 aa19.76■□□□□ 0.75
MALAT1-217ENST00000620902 TSPYL2Q9H2G4 693 aaPredicted RBP19.73■□□□□ 0.75
MALAT1-217ENST00000620902 ZNF579Q8NAF0 562 aaKnown RBP19.7■□□□□ 0.74
MALAT1-217ENST00000620902 FAM212AQ96EL1 285 aa19.7■□□□□ 0.74
MALAT1-217ENST00000620902 CLCN6P51797 869 aa19.67■□□□□ 0.74
MALAT1-217ENST00000620902 DCAF8Q5TAQ9 597 aa19.62■□□□□ 0.73
MALAT1-217ENST00000620902 CCDC61Q9Y6R9 512 aa19.62■□□□□ 0.73
MALAT1-217ENST00000620902 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
MALAT1-217ENST00000620902 GSE1Q14687 1217 aa19.6■□□□□ 0.73
MALAT1-217ENST00000620902 PHF12Q96QT6 1004 aa19.54■□□□□ 0.72
MALAT1-217ENST00000620902 GABBR2O75899 941 aa19.53■□□□□ 0.72
MALAT1-217ENST00000620902 CIZ1Q9ULV3 898 aaPredicted RBP19.46■□□□□ 0.71
MALAT1-217ENST00000620902 KIF12Q96FN5 646 aa19.45■□□□□ 0.7
MALAT1-217ENST00000620902 SGIP1Q9BQI5 828 aa19.38■□□□□ 0.69
MALAT1-217ENST00000620902 CECR2Q9BXF3 1484 aa19.37■□□□□ 0.69
MALAT1-217ENST00000620902 MAP3K13O43283 966 aa19.36■□□□□ 0.69
MALAT1-217ENST00000620902 CHRM1P11229 460 aaPredicted RBP19.36■□□□□ 0.69
MALAT1-217ENST00000620902 PYGBP11216 843 aa19.35■□□□□ 0.69
MALAT1-217ENST00000620902 TRIM41Q8WV44 630 aa19.35■□□□□ 0.69
MALAT1-217ENST00000620902 GALR2O43603 387 aaPredicted RBP19.34■□□□□ 0.69
MALAT1-217ENST00000620902 MS4A3Q96HJ5 214 aa19.32■□□□□ 0.68
MALAT1-217ENST00000620902 PCDHB13Q9Y5F0 798 aa19.3■□□□□ 0.68
MALAT1-217ENST00000620902 DCBLD2Q96PD2 775 aa19.22■□□□□ 0.67
MALAT1-217ENST00000620902 IFNL1Q8IU54 200 aa19.19■□□□□ 0.66
MALAT1-217ENST00000620902 ZNF467Q7Z7K2 595 aaPredicted RBP19.18■□□□□ 0.66
MALAT1-217ENST00000620902 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
MALAT1-217ENST00000620902 UNC13AQ9UPW8 1703 aa19.17■□□□□ 0.66
MALAT1-217ENST00000620902 PKD2Q13563 968 aa19.14■□□□□ 0.65
MALAT1-217ENST00000620902 PCDHB8Q9UN66 801 aa19.11■□□□□ 0.65
MALAT1-217ENST00000620902 TIE1P35590 1138 aa19.1■□□□□ 0.65
MALAT1-217ENST00000620902 ECM2O94769 699 aaPredicted RBP19.09■□□□□ 0.65
MALAT1-217ENST00000620902 BICRAQ9NZM4 1560 aa19.09■□□□□ 0.65
MALAT1-217ENST00000620902 NACADO15069 1562 aa19.08■□□□□ 0.65
MALAT1-217ENST00000620902 POTEIP0CG38 1075 aa19.08■□□□□ 0.64
MALAT1-217ENST00000620902 ASTLQ6HA08 431 aaPredicted RBP19.06■□□□□ 0.64
MALAT1-217ENST00000620902 TRPC6Q9Y210 931 aa19.06■□□□□ 0.64
MALAT1-217ENST00000620902 ATMINO43313 823 aaPredicted RBP19.02■□□□□ 0.64
MALAT1-217ENST00000620902 BMP2KQ9NSY1 1161 aaPredicted RBP19.02■□□□□ 0.64
MALAT1-217ENST00000620902 CUX2O14529 1486 aa19.02■□□□□ 0.63
MALAT1-217ENST00000620902 RIOK3O14730 519 aaKnown RBP18.98■□□□□ 0.63
MALAT1-217ENST00000620902 TTLL13PA6NNM8 815 aa18.97■□□□□ 0.63
MALAT1-217ENST00000620902 PDAP1Q13442 181 aaKnown RBP18.97■□□□□ 0.63
MALAT1-217ENST00000620902 TMEM106CQ9BVX2 250 aa18.96■□□□□ 0.63
MALAT1-217ENST00000620902 RNF25Q96BH1 459 aaPredicted RBP18.95■□□□□ 0.62
MALAT1-217ENST00000620902 PSEN1P49768 467 aa18.94■□□□□ 0.62
MALAT1-217ENST00000620902 ATN1P54259 1190 aaPredicted RBP18.94■□□□□ 0.62
MALAT1-217ENST00000620902 TAOK2Q9UL54 1235 aa18.93■□□□□ 0.62
MALAT1-217ENST00000620902 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
MALAT1-217ENST00000620902 VGFO15240 615 aaPredicted RBP18.89■□□□□ 0.61
MALAT1-217ENST00000620902 PELP1Q8IZL8 1130 aaKnown RBP18.88■□□□□ 0.61
MALAT1-217ENST00000620902 RGL2O15211 777 aa18.87■□□□□ 0.61
MALAT1-217ENST00000620902 SLC39A7Q92504 469 aa18.85■□□□□ 0.61
MALAT1-217ENST00000620902 TRIM35Q9UPQ4 493 aa18.85■□□□□ 0.61
MALAT1-217ENST00000620902 C7P10643 843 aa18.82■□□□□ 0.6
MALAT1-217ENST00000620902 IER5LQ5T953 404 aa18.78■□□□□ 0.6
MALAT1-217ENST00000620902 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
MALAT1-217ENST00000620902 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.76■□□□□ 0.59
MALAT1-217ENST00000620902 ZFP91Q96JP5 570 aaPredicted RBP18.76■□□□□ 0.59
MALAT1-217ENST00000620902 GOLGA2Q08379 1002 aa18.75■□□□□ 0.59
MALAT1-217ENST00000620902 METRNQ9UJH8 293 aa18.75■□□□□ 0.59
MALAT1-217ENST00000620902 RTN4Q9NQC3 1192 aaKnown RBP18.72■□□□□ 0.59
MALAT1-217ENST00000620902 MKRN3Q13064 507 aaKnown RBP18.68■□□□□ 0.58
MALAT1-217ENST00000620902 CABP2Q9NPB3 220 aa18.68■□□□□ 0.58
MALAT1-217ENST00000620902 SHROOM4Q9ULL8 1493 aa18.68■□□□□ 0.58
MALAT1-217ENST00000620902 STK25O00506 426 aa18.64■□□□□ 0.57
MALAT1-217ENST00000620902 SEC24BO95487 1268 aa18.64■□□□□ 0.57
MALAT1-217ENST00000620902 BCL11BQ9C0K0 894 aaPredicted RBP18.63■□□□□ 0.57
MALAT1-217ENST00000620902 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
MALAT1-217ENST00000620902 STK24Q9Y6E0 443 aa18.61■□□□□ 0.57
MALAT1-217ENST00000620902 IRX5P78411 483 aaPredicted RBP18.59■□□□□ 0.57
MALAT1-217ENST00000620902 PLCG2P16885 1265 aa18.57■□□□□ 0.56
MALAT1-217ENST00000620902 OCEL1Q9H607 264 aa18.57■□□□□ 0.56
MALAT1-217ENST00000620902 POTEFA5A3E0 1075 aa18.56■□□□□ 0.56
MALAT1-217ENST00000620902 LHX8Q68G74 356 aa18.56■□□□□ 0.56
MALAT1-217ENST00000620902 COLQQ9Y215 455 aaPredicted RBP18.56■□□□□ 0.56
MALAT1-217ENST00000620902 EFCAB3Q8N7B9 438 aa18.55■□□□□ 0.56
MALAT1-217ENST00000620902 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
MALAT1-217ENST00000620902 HS6ST3Q8IZP7 471 aa18.53■□□□□ 0.56
MALAT1-217ENST00000620902 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.53■□□□□ 0.56not detected■■□□□ 11.5
MALAT1-217ENST00000620902 SOX12O15370 315 aa18.52■□□□□ 0.56
MALAT1-217ENST00000620902 CHGAP10645 457 aaKnown RBP18.5■□□□□ 0.55
MALAT1-217ENST00000620902 ILDR1Q86SU0 546 aaPredicted RBP18.5■□□□□ 0.55
MALAT1-217ENST00000620902 POTEB2H3BUK9 544 aa18.46■□□□□ 0.55
MALAT1-217ENST00000620902 PDCD7Q8N8D1 485 aaKnown RBP18.44■□□□□ 0.54
MALAT1-217ENST00000620902 NLRP6P59044 892 aa18.38■□□□□ 0.53
MALAT1-217ENST00000620902 MAMSTRQ6ZN01 415 aa18.38■□□□□ 0.53
MALAT1-217ENST00000620902 PHF8Q9UPP1 1060 aa18.36■□□□□ 0.53
MALAT1-217ENST00000620902 L3MBTL3Q96JM7 780 aaPredicted RBP18.35■□□□□ 0.53
MALAT1-217ENST00000620902 POTEJP0CG39 1038 aa18.33■□□□□ 0.52
MALAT1-217ENST00000620902 MFRPQ9BY79 579 aa18.32■□□□□ 0.52
MALAT1-217ENST00000620902 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
MALAT1-217ENST00000620902 FBXO22Q8NEZ5 403 aa18.3■□□□□ 0.52
MALAT1-217ENST00000620902 DPY19L2Q6NUT2 758 aa18.28■□□□□ 0.52
MALAT1-217ENST00000620902 SCUBE2Q9NQ36 999 aa18.28■□□□□ 0.52
MALAT1-217ENST00000620902 MS4A4AQ96JQ5 239 aa18.27■□□□□ 0.52
MALAT1-217ENST00000620902 OTUD5Q96G74 571 aa18.25■□□□□ 0.51
MALAT1-217ENST00000620902 G3V3G9 751 aa18.24■□□□□ 0.51
MALAT1-217ENST00000620902 RYDENQ9NUL5 291 aaKnown RBP18.22■□□□□ 0.51
MALAT1-217ENST00000620902 BOLA1Q9Y3E2 137 aa18.22■□□□□ 0.51
MALAT1-217ENST00000620902 NKX1-1Q15270 411 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms