RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 ADAMTS12P58397 1594 aa23.76■■□□□ 1.39
PSMC3-213ENST00000619920 APLP2Q06481 763 aa23.74■■□□□ 1.39
PSMC3-213ENST00000619920 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
PSMC3-213ENST00000619920 EFCAB5A4FU69 1503 aa23.72■■□□□ 1.39
PSMC3-213ENST00000619920 SNAPC4Q5SXM2 1469 aa23.64■■□□□ 1.37
PSMC3-213ENST00000619920 MAGI1Q96QZ7 1491 aaPredicted RBP23.64■■□□□ 1.37
PSMC3-213ENST00000619920 SAMD9Q5K651 1589 aa23.57■■□□□ 1.36
PSMC3-213ENST00000619920 TTBK1Q5TCY1 1321 aaPredicted RBP23.56■■□□□ 1.36
PSMC3-213ENST00000619920 MAP3K1Q13233 1512 aa23.55■■□□□ 1.36
PSMC3-213ENST00000619920 GRIN2AQ12879 1464 aa23.55■■□□□ 1.36
PSMC3-213ENST00000619920 FHOD3Q2V2M9 1422 aa23.54■■□□□ 1.36
PSMC3-213ENST00000619920 SYNJ2O15056 1496 aa23.54■■□□□ 1.36
PSMC3-213ENST00000619920 IQGAP2Q13576 1575 aa23.53■■□□□ 1.36
PSMC3-213ENST00000619920 P3H3Q8IVL6 736 aa23.52■■□□□ 1.36
PSMC3-213ENST00000619920 HRCP23327 699 aa23.52■■□□□ 1.36
PSMC3-213ENST00000619920 FMN1Q68DA7 1419 aa23.51■■□□□ 1.35
PSMC3-213ENST00000619920 KIAA0586Q9BVV6 1533 aa23.5■■□□□ 1.35
PSMC3-213ENST00000619920 CHMP7Q8WUX9 453 aaPredicted RBP23.48■■□□□ 1.35
PSMC3-213ENST00000619920 CASKIN1Q8WXD9 1431 aa23.47■■□□□ 1.35
PSMC3-213ENST00000619920 FYCO1Q9BQS8 1478 aa23.47■■□□□ 1.35
PSMC3-213ENST00000619920 KANK4Q5T7N3 995 aaPredicted RBP23.45■■□□□ 1.34
PSMC3-213ENST00000619920 UGGT2Q9NYU1 1516 aa23.45■■□□□ 1.34
PSMC3-213ENST00000619920 PCF11O94913 1555 aaKnown RBP23.45■■□□□ 1.34
PSMC3-213ENST00000619920 TIAM1Q13009 1591 aa23.44■■□□□ 1.34
PSMC3-213ENST00000619920 NUP160Q12769 1436 aa23.39■■□□□ 1.33
PSMC3-213ENST00000619920 CFAP43Q8NDM7 1665 aa23.37■■□□□ 1.33
PSMC3-213ENST00000619920 CEP170Q5SW79 1584 aa23.36■■□□□ 1.33
PSMC3-213ENST00000619920 LRRC9Q6ZRR7 1453 aa23.35■■□□□ 1.33
PSMC3-213ENST00000619920 FBLN2P98095 1184 aa23.35■■□□□ 1.33
PSMC3-213ENST00000619920 ATP1B4Q9UN42 357 aaPredicted RBP23.31■■□□□ 1.32
PSMC3-213ENST00000619920 DISP1Q96F81 1524 aa23.3■■□□□ 1.32
PSMC3-213ENST00000619920 KIAA0556O60303 1618 aa23.29■■□□□ 1.32
PSMC3-213ENST00000619920 RRBP1Q9P2E9 1410 aaKnown RBP23.27■■□□□ 1.32
PSMC3-213ENST00000619920 ZEB1P37275 1124 aaPredicted RBP23.24■■□□□ 1.31
PSMC3-213ENST00000619920 JPH4Q96JJ6 628 aa23.23■■□□□ 1.31
PSMC3-213ENST00000619920 CCDC18Q5T9S5 1454 aa23.22■■□□□ 1.31
PSMC3-213ENST00000619920 HECW1Q76N89 1606 aa23.21■■□□□ 1.31
PSMC3-213ENST00000619920 CARMIL2Q6F5E8 1435 aa23.2■■□□□ 1.3
PSMC3-213ENST00000619920 CCNB3Q8WWL7 1395 aa23.18■■□□□ 1.3
PSMC3-213ENST00000619920 LRRIQ1Q96JM4 1722 aa23.17■■□□□ 1.3
PSMC3-213ENST00000619920 CHD1O14646 1710 aa23.16■■□□□ 1.3
PSMC3-213ENST00000619920 HNRNPUL2Q1KMD3 747 aaKnown RBP23.14■■□□□ 1.3
PSMC3-213ENST00000619920 MTUS2Q5JR59 1369 aa23.14■■□□□ 1.29
PSMC3-213ENST00000619920 PHLDB1Q86UU1 1377 aa23.13■■□□□ 1.29
PSMC3-213ENST00000619920 EPRSP07814 1512 aaKnown RBP23.13■■□□□ 1.29
PSMC3-213ENST00000619920 EHBP1L1Q8N3D4 1523 aa23.1■■□□□ 1.29
PSMC3-213ENST00000619920 RAPGEF6Q8TEU7 1601 aa23.08■■□□□ 1.29
PSMC3-213ENST00000619920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.08■■□□□ 1.29
PSMC3-213ENST00000619920 CCER1Q8TC90 406 aaPredicted RBP23.06■■□□□ 1.28
PSMC3-213ENST00000619920 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.04■■□□□ 1.28
PSMC3-213ENST00000619920 NUP153P49790 1475 aaKnown RBP23.04■■□□□ 1.28
PSMC3-213ENST00000619920 PRG4Q92954 1404 aaPredicted RBP23.03■■□□□ 1.28
PSMC3-213ENST00000619920 SUPT6HQ7KZ85 1726 aaKnown RBP23.03■■□□□ 1.28
PSMC3-213ENST00000619920 SHROOM2Q13796 1616 aa23.02■■□□□ 1.28
PSMC3-213ENST00000619920 NCOA2Q15596 1464 aa23.02■■□□□ 1.27
PSMC3-213ENST00000619920 CDK13Q14004 1512 aaKnown RBP23.01■■□□□ 1.27
PSMC3-213ENST00000619920 MAGI3Q5TCQ9 1506 aa23.01■■□□□ 1.27
PSMC3-213ENST00000619920 ARHGEF11O15085 1522 aa23■■□□□ 1.27
PSMC3-213ENST00000619920 PLB1Q6P1J6 1458 aa22.97■■□□□ 1.27
PSMC3-213ENST00000619920 FGD6Q6ZV73 1430 aa22.97■■□□□ 1.27
PSMC3-213ENST00000619920 CDK11AQ9UQ88 783 aaPredicted RBP22.97■■□□□ 1.27
PSMC3-213ENST00000619920 MYOM3Q5VTT5 1437 aa22.96■■□□□ 1.27
PSMC3-213ENST00000619920 ABCA8O94911 1581 aa22.96■■□□□ 1.27
PSMC3-213ENST00000619920 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
PSMC3-213ENST00000619920 PTPRGP23470 1445 aa22.94■■□□□ 1.26
PSMC3-213ENST00000619920 FAM50AQ14320 339 aaKnown RBP22.93■■□□□ 1.26
PSMC3-213ENST00000619920 ARID3CA6NKF2 412 aa22.89■■□□□ 1.26
PSMC3-213ENST00000619920 ITGAEP38570 1179 aa22.87■■□□□ 1.25
PSMC3-213ENST00000619920 TROQ12816 1431 aaPredicted RBP22.86■■□□□ 1.25
PSMC3-213ENST00000619920 MIA2Q96PC5 1412 aa22.85■■□□□ 1.25
PSMC3-213ENST00000619920 TCOF1Q13428 1488 aaKnown RBP22.83■■□□□ 1.24
PSMC3-213ENST00000619920 ATP10BO94823 1461 aa22.82■■□□□ 1.24
PSMC3-213ENST00000619920 PTPN23Q9H3S7 1636 aa22.82■■□□□ 1.24
PSMC3-213ENST00000619920 UACAQ9BZF9 1416 aa22.81■■□□□ 1.24
PSMC3-213ENST00000619920 SETD5Q9C0A6 1442 aa22.79■■□□□ 1.24
PSMC3-213ENST00000619920 ERCC6L2Q5T890 1561 aa22.79■■□□□ 1.24
PSMC3-213ENST00000619920 CLSPNQ9HAW4 1339 aa22.78■■□□□ 1.24
PSMC3-213ENST00000619920 ADCY10Q96PN6 1610 aa22.78■■□□□ 1.24
PSMC3-213ENST00000619920 PLEKHD1A6NEE1 506 aa22.77■■□□□ 1.24
PSMC3-213ENST00000619920 RAB3GAP2Q9H2M9 1393 aa22.74■■□□□ 1.23
PSMC3-213ENST00000619920 DHX57Q6P158 1386 aaKnown RBP22.74■■□□□ 1.23
PSMC3-213ENST00000619920 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
PSMC3-213ENST00000619920 UHRF1BP1LA0JNW5 1464 aa22.69■■□□□ 1.22
PSMC3-213ENST00000619920 PTPRKQ15262 1439 aa22.69■■□□□ 1.22
PSMC3-213ENST00000619920 OSCARQ8IYS5 282 aa22.68■■□□□ 1.22
PSMC3-213ENST00000619920 ITSN2Q9NZM3 1697 aa22.67■■□□□ 1.22
PSMC3-213ENST00000619920 KIF14Q15058 1648 aa22.67■■□□□ 1.22
PSMC3-213ENST00000619920 GPATCH8Q9UKJ3 1502 aaKnown RBP22.67■■□□□ 1.22
PSMC3-213ENST00000619920 HFM1A2PYH4 1435 aa22.66■■□□□ 1.22
PSMC3-213ENST00000619920 ABCC10Q5T3U5 1492 aa22.64■■□□□ 1.22
PSMC3-213ENST00000619920 AKNAQ7Z591 1439 aa22.62■■□□□ 1.21
PSMC3-213ENST00000619920 CFDP1Q9UEE9 299 aaPredicted RBP22.62■■□□□ 1.21
PSMC3-213ENST00000619920 NAIPQ13075 1403 aa22.59■■□□□ 1.21
PSMC3-213ENST00000619920 KDM5BQ9UGL1 1544 aa22.59■■□□□ 1.21
PSMC3-213ENST00000619920 DNMT1P26358 1616 aaKnown RBP22.57■■□□□ 1.2
PSMC3-213ENST00000619920 DAPK1P53355 1430 aa22.56■■□□□ 1.2
PSMC3-213ENST00000619920 CAMSAP2Q08AD1 1489 aa22.56■■□□□ 1.2
PSMC3-213ENST00000619920 ZNF644Q9H582 1327 aaPredicted RBP22.55■■□□□ 1.2
PSMC3-213ENST00000619920 ROCK1Q13464 1354 aa22.55■■□□□ 1.2
PSMC3-213ENST00000619920 ABCC5O15440 1437 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms