RNA–Protein interactions for RNA: ENST00000619831.4

DMD-229, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-229ENST00000619831 NCLP19338 710 aaKnown RBP5.95□□□□□ -1.46
DMD-229ENST00000619831 PABPN1Q86U42 306 aaKnown RBP eCLIP5.95□□□□□ -1.46
DMD-229ENST00000619831 MRS2Q9HD23 443 aa5.95□□□□□ -1.46
DMD-229ENST00000619831 HSP90AA1P07900 732 aaKnown RBP5.94□□□□□ -1.46
DMD-229ENST00000619831 RGS3P49796 1198 aa5.94□□□□□ -1.46
DMD-229ENST00000619831 SIN3AQ96ST3 1273 aa5.93□□□□□ -1.46
DMD-229ENST00000619831 A0A0U1RQG5 324 aaPredicted RBP5.93□□□□□ -1.46
DMD-229ENST00000619831 SLC4A3P48751 1232 aa5.93□□□□□ -1.46
DMD-229ENST00000619831 KDM2AQ9Y2K7 1162 aa5.93□□□□□ -1.46
DMD-229ENST00000619831 GZF1Q9H116 711 aaPredicted RBP5.93□□□□□ -1.46
DMD-229ENST00000619831 SCRIBQ14160 1630 aa5.92□□□□□ -1.46
DMD-229ENST00000619831 TAOK2Q9UL54 1235 aa5.92□□□□□ -1.46
DMD-229ENST00000619831 TONSLQ96HA7 1378 aa5.91□□□□□ -1.46
DMD-229ENST00000619831 ZNF777Q9ULD5 760 aaPredicted RBP5.91□□□□□ -1.46
DMD-229ENST00000619831 IL27Q8NEV9 243 aa5.9□□□□□ -1.46
DMD-229ENST00000619831 PLEKHG5O94827 1062 aa5.9□□□□□ -1.46
DMD-229ENST00000619831 ANP32BQ92688 251 aaKnown RBP5.89□□□□□ -1.47
DMD-229ENST00000619831 VSIG10Q8N0Z9 540 aa5.88□□□□□ -1.47
DMD-229ENST00000619831 BCL11BQ9C0K0 894 aaPredicted RBP5.87□□□□□ -1.47
DMD-229ENST00000619831 FOXD4L1Q9NU39 408 aa5.87□□□□□ -1.47
DMD-229ENST00000619831 TMC1Q8TDI8 760 aa5.87□□□□□ -1.47
DMD-229ENST00000619831 PLPPR3Q6T4P5 718 aa5.87□□□□□ -1.47
DMD-229ENST00000619831 RRP7BPQ9NSQ0 103 aa5.85□□□□□ -1.47
DMD-229ENST00000619831 TRIM44Q96DX7 344 aaPredicted RBP5.85□□□□□ -1.47
DMD-229ENST00000619831 PPP4R2Q9NY27 417 aa5.85□□□□□ -1.47
DMD-229ENST00000619831 DNTTIP2Q5QJE6 756 aaKnown RBP5.85□□□□□ -1.47
DMD-229ENST00000619831 NEUROD2Q15784 382 aa5.84□□□□□ -1.48
DMD-229ENST00000619831 SLKQ9H2G2 1235 aaPredicted RBP5.84□□□□□ -1.48
DMD-229ENST00000619831 PTMAP06454 111 aaKnown RBP5.83□□□□□ -1.48
DMD-229ENST00000619831 PLCB2Q00722 1185 aa5.83□□□□□ -1.48
DMD-229ENST00000619831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.83□□□□□ -1.48
DMD-229ENST00000619831 C11orf95C9JLR9 678 aaPredicted RBP5.83□□□□□ -1.48
DMD-229ENST00000619831 UPF2Q9HAU5 1272 aaKnown RBP5.83□□□□□ -1.48
DMD-229ENST00000619831 BRPF3Q9ULD4 1205 aa5.83□□□□□ -1.48
DMD-229ENST00000619831 CC2D1BQ5T0F9 858 aaKnown RBP5.82□□□□□ -1.48
DMD-229ENST00000619831 CEP162Q5TB80 1403 aa5.82□□□□□ -1.48
DMD-229ENST00000619831 TNNT2P45379 298 aaPredicted RBP5.82□□□□□ -1.48
DMD-229ENST00000619831 ABCC9O60706 1549 aa5.82□□□□□ -1.48
DMD-229ENST00000619831 FOXD1Q16676 465 aa5.81□□□□□ -1.48
DMD-229ENST00000619831 DDRGK1Q96HY6 314 aa5.81□□□□□ -1.48
DMD-229ENST00000619831 MAPK8IP2Q13387 824 aaPredicted RBP5.81□□□□□ -1.48
DMD-229ENST00000619831 FOXD4L5Q5VV16 416 aaPredicted RBP5.81□□□□□ -1.48
DMD-229ENST00000619831 FOXD4L4Q8WXT5 416 aaPredicted RBP5.81□□□□□ -1.48
DMD-229ENST00000619831 FBLN2P98095 1184 aa5.81□□□□□ -1.48
DMD-229ENST00000619831 CHGAP10645 457 aaKnown RBP5.8□□□□□ -1.48
DMD-229ENST00000619831 PAK3O75914 559 aaPredicted RBP5.79□□□□□ -1.48
DMD-229ENST00000619831 FRAT1Q92837 279 aaPredicted RBP5.79□□□□□ -1.48
DMD-229ENST00000619831 ERICH6BQ5W0A0 696 aa5.79□□□□□ -1.48
DMD-229ENST00000619831 MSH5O43196 834 aa5.78□□□□□ -1.48
DMD-229ENST00000619831 WDR43Q15061 677 aaKnown RBP eCLIP5.78□□□□□ -1.48
DMD-229ENST00000619831 PLIN1O60240 522 aa5.78□□□□□ -1.48
DMD-229ENST00000619831 TULP1O00294 542 aaPredicted RBP5.77□□□□□ -1.49
DMD-229ENST00000619831 PPM1GO15355 546 aaPredicted RBP5.77□□□□□ -1.49
DMD-229ENST00000619831 HSP90AB1P08238 724 aaKnown RBP5.77□□□□□ -1.49
DMD-229ENST00000619831 APBB1O00213 710 aa5.76□□□□□ -1.49
DMD-229ENST00000619831 BECN1Q14457 450 aa5.76□□□□□ -1.49
DMD-229ENST00000619831 RGL3Q3MIN7 710 aa5.76□□□□□ -1.49
DMD-229ENST00000619831 PKNOX2Q96KN3 472 aa5.76□□□□□ -1.49
DMD-229ENST00000619831 NOL8Q76FK4 1167 aaKnown RBP5.76□□□□□ -1.49
DMD-229ENST00000619831 CLIP1P30622 1438 aa5.76□□□□□ -1.49
DMD-229ENST00000619831 IPO9Q96P70 1041 aaKnown RBP5.75□□□□□ -1.49
DMD-229ENST00000619831 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.75□□□□□ -1.49
DMD-229ENST00000619831 SKAP1Q86WV1 359 aa5.75□□□□□ -1.49
DMD-229ENST00000619831 CDK11BP21127 795 aaKnown RBP5.74□□□□□ -1.49
DMD-229ENST00000619831 RB1CC1Q8TDY2 1594 aa5.74□□□□□ -1.49
DMD-229ENST00000619831 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.74□□□□□ -1.49
DMD-229ENST00000619831 RBM10P98175 930 aaKnown RBP5.73□□□□□ -1.49
DMD-229ENST00000619831 EIF4G2P78344 907 aaKnown RBP eCLIP5.73□□□□□ -1.492e-7■■■□□ 16.3
DMD-229ENST00000619831 FOXD4L6Q3SYB3 417 aaPredicted RBP5.73□□□□□ -1.49
DMD-229ENST00000619831 FOXD4L3Q6VB84 417 aaPredicted RBP5.73□□□□□ -1.49
DMD-229ENST00000619831 HSPA5P11021 654 aaKnown RBP5.73□□□□□ -1.49
DMD-229ENST00000619831 PNNQ9H307 717 aaKnown RBP5.73□□□□□ -1.49
DMD-229ENST00000619831 EEA1Q15075 1411 aa5.73□□□□□ -1.49
DMD-229ENST00000619831 ABCC8Q09428 1581 aa5.72□□□□□ -1.49
DMD-229ENST00000619831 USP35Q9P2H5 1018 aa5.72□□□□□ -1.49
DMD-229ENST00000619831 HSP90AA2PQ14568 343 aaPredicted RBP5.72□□□□□ -1.49
DMD-229ENST00000619831 EXOC6Q8TAG9 804 aa5.71□□□□□ -1.49
DMD-229ENST00000619831 MFAP1P55081 439 aaKnown RBP5.71□□□□□ -1.5
DMD-229ENST00000619831 CCDC146Q8IYE0 955 aa5.71□□□□□ -1.5
DMD-229ENST00000619831 KANK4Q5T7N3 995 aaPredicted RBP5.71□□□□□ -1.5
DMD-229ENST00000619831 MPNDQ8N594 471 aa5.71□□□□□ -1.5
DMD-229ENST00000619831 PODXL2Q9NZ53 605 aa5.71□□□□□ -1.5
DMD-229ENST00000619831 SOGA1O94964 1423 aa5.71□□□□□ -1.5
DMD-229ENST00000619831 PRDM10Q9NQV6 1147 aa5.7□□□□□ -1.5
DMD-229ENST00000619831 FTSJ3Q8IY81 847 aaKnown RBP5.7□□□□□ -1.5
DMD-229ENST00000619831 MSNP26038 577 aaKnown RBP5.7□□□□□ -1.5
DMD-229ENST00000619831 DRC7Q8IY82 874 aa5.69□□□□□ -1.5
DMD-229ENST00000619831 WRNQ14191 1432 aaPredicted RBP eCLIP5.69□□□□□ -1.5
DMD-229ENST00000619831 FAM13BQ9NYF5 915 aa5.68□□□□□ -1.5
DMD-229ENST00000619831 NAP1L2Q9ULW6 460 aaPredicted RBP5.68□□□□□ -1.5
DMD-229ENST00000619831 GOLGA6L3A6NEY3 463 aa5.68□□□□□ -1.5
DMD-229ENST00000619831 GSE1Q14687 1217 aa5.68□□□□□ -1.5
DMD-229ENST00000619831 CRBNQ96SW2 442 aa5.67□□□□□ -1.5
DMD-229ENST00000619831 PDE4AP27815 886 aa5.67□□□□□ -1.5
DMD-229ENST00000619831 L1TD1Q5T7N2 865 aaKnown RBP5.67□□□□□ -1.5
DMD-229ENST00000619831 HSCBQ8IWL3 235 aa5.67□□□□□ -1.5
DMD-229ENST00000619831 RCAN3Q9UKA8 241 aa5.65□□□□□ -1.5
DMD-229ENST00000619831 PDE4CQ08493 712 aa5.65□□□□□ -1.5
DMD-229ENST00000619831 CLUAP1Q96AJ1 413 aa5.65□□□□□ -1.5
DMD-229ENST00000619831 A0A0G2JS52 829 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms