RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 ZNF608Q9ULD9 1512 aaPredicted RBP30.84■■■□□ 2.53
MMP28-207ENST00000619655 THOC2Q8NI27 1593 aaKnown RBP30.83■■■□□ 2.53
MMP28-207ENST00000619655 KANK4Q5T7N3 995 aaPredicted RBP30.8■■■□□ 2.52
MMP28-207ENST00000619655 GRIN2BQ13224 1484 aa30.76■■■□□ 2.51
MMP28-207ENST00000619655 FHOD3Q2V2M9 1422 aa30.76■■■□□ 2.51
MMP28-207ENST00000619655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.74■■■□□ 2.51
MMP28-207ENST00000619655 FHAD1B1AJZ9 1412 aa30.73■■■□□ 2.51
MMP28-207ENST00000619655 ADAMTS12P58397 1594 aa30.72■■■□□ 2.51
MMP28-207ENST00000619655 EFCAB5A4FU69 1503 aa30.71■■■□□ 2.51
MMP28-207ENST00000619655 ATP1B4Q9UN42 357 aaPredicted RBP30.69■■■□□ 2.5
MMP28-207ENST00000619655 EIF4G3O43432 1585 aaKnown RBP30.68■■■□□ 2.5
MMP28-207ENST00000619655 ZEB1P37275 1124 aaPredicted RBP30.67■■■□□ 2.5
MMP28-207ENST00000619655 HNRNPUL2Q1KMD3 747 aaKnown RBP30.65■■■□□ 2.5
MMP28-207ENST00000619655 PCF11O94913 1555 aaKnown RBP30.64■■■□□ 2.5
MMP28-207ENST00000619655 CCER1Q8TC90 406 aaPredicted RBP30.63■■■□□ 2.49
MMP28-207ENST00000619655 SNAPC4Q5SXM2 1469 aa30.6■■■□□ 2.49
MMP28-207ENST00000619655 TIAM1Q13009 1591 aa30.6■■■□□ 2.49
MMP28-207ENST00000619655 SAMD9Q5K651 1589 aa30.56■■■□□ 2.48
MMP28-207ENST00000619655 IQGAP2Q13576 1575 aa30.51■■■□□ 2.47
MMP28-207ENST00000619655 FMN1Q68DA7 1419 aa30.5■■■□□ 2.47
MMP28-207ENST00000619655 MAP3K1Q13233 1512 aa30.5■■■□□ 2.47
MMP28-207ENST00000619655 FYCO1Q9BQS8 1478 aa30.49■■■□□ 2.47
MMP28-207ENST00000619655 CASKIN1Q8WXD9 1431 aa30.48■■■□□ 2.47
MMP28-207ENST00000619655 CFAP43Q8NDM7 1665 aa30.46■■■□□ 2.47
MMP28-207ENST00000619655 LRRC9Q6ZRR7 1453 aa30.46■■■□□ 2.47
MMP28-207ENST00000619655 FBLN2P98095 1184 aa30.42■■■□□ 2.46
MMP28-207ENST00000619655 GRIN2AQ12879 1464 aa30.42■■■□□ 2.46
MMP28-207ENST00000619655 MAGI1Q96QZ7 1491 aaPredicted RBP30.4■■■□□ 2.46
MMP28-207ENST00000619655 CHMP7Q8WUX9 453 aaPredicted RBP30.4■■■□□ 2.46
MMP28-207ENST00000619655 RRBP1Q9P2E9 1410 aaKnown RBP30.38■■■□□ 2.45
MMP28-207ENST00000619655 CCNB3Q8WWL7 1395 aa30.34■■■□□ 2.45
MMP28-207ENST00000619655 SYNJ2O15056 1496 aa30.33■■■□□ 2.45
MMP28-207ENST00000619655 KIAA0586Q9BVV6 1533 aa30.32■■■□□ 2.44
MMP28-207ENST00000619655 LRRIQ1Q96JM4 1722 aa30.29■■■□□ 2.44
MMP28-207ENST00000619655 ITGAEP38570 1179 aa30.29■■■□□ 2.44
MMP28-207ENST00000619655 PHLDB1Q86UU1 1377 aa30.29■■■□□ 2.44
MMP28-207ENST00000619655 UGGT2Q9NYU1 1516 aa30.28■■■□□ 2.44
MMP28-207ENST00000619655 CEP170Q5SW79 1584 aa30.25■■■□□ 2.43
MMP28-207ENST00000619655 MTUS2Q5JR59 1369 aa30.22■■■□□ 2.43
MMP28-207ENST00000619655 KIAA0556O60303 1618 aa30.18■■■□□ 2.42
MMP28-207ENST00000619655 DISP1Q96F81 1524 aa30.18■■■□□ 2.42
MMP28-207ENST00000619655 FAM50AQ14320 339 aaKnown RBP30.16■■■□□ 2.42
MMP28-207ENST00000619655 ARID3CA6NKF2 412 aa30.16■■■□□ 2.42
MMP28-207ENST00000619655 HECW1Q76N89 1606 aa30.14■■■□□ 2.42
MMP28-207ENST00000619655 NUP160Q12769 1436 aa30.1■■■□□ 2.41
MMP28-207ENST00000619655 CCDC18Q5T9S5 1454 aa30.09■■■□□ 2.41
MMP28-207ENST00000619655 EPRSP07814 1512 aaKnown RBP30.06■■■□□ 2.4
MMP28-207ENST00000619655 CDK13Q14004 1512 aaKnown RBP30.05■■■□□ 2.4
MMP28-207ENST00000619655 JPH4Q96JJ6 628 aa30.04■■■□□ 2.4
MMP28-207ENST00000619655 EHBP1L1Q8N3D4 1523 aa30.04■■■□□ 2.4
MMP28-207ENST00000619655 MAGI3Q5TCQ9 1506 aa30.03■■■□□ 2.4
MMP28-207ENST00000619655 NCOA2Q15596 1464 aa30.02■■■□□ 2.4
MMP28-207ENST00000619655 SUPT6HQ7KZ85 1726 aaKnown RBP30.01■■■□□ 2.4
MMP28-207ENST00000619655 FGD6Q6ZV73 1430 aa29.97■■■□□ 2.39
MMP28-207ENST00000619655 CARMIL2Q6F5E8 1435 aa29.96■■■□□ 2.39
MMP28-207ENST00000619655 CHD1O14646 1710 aa29.96■■■□□ 2.39
MMP28-207ENST00000619655 RAPGEF6Q8TEU7 1601 aa29.96■■■□□ 2.39
MMP28-207ENST00000619655 NUP153P49790 1475 aaKnown RBP29.92■■■□□ 2.38
MMP28-207ENST00000619655 DHX57Q6P158 1386 aaKnown RBP29.92■■■□□ 2.38
MMP28-207ENST00000619655 MYOM3Q5VTT5 1437 aa29.91■■■□□ 2.38
MMP28-207ENST00000619655 RAB3GAP2Q9H2M9 1393 aa29.89■■■□□ 2.38
MMP28-207ENST00000619655 PLB1Q6P1J6 1458 aa29.89■■■□□ 2.38
MMP28-207ENST00000619655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.85■■■□□ 2.37
MMP28-207ENST00000619655 ARHGEF11O15085 1522 aa29.84■■■□□ 2.37
MMP28-207ENST00000619655 SETD5Q9C0A6 1442 aa29.83■■■□□ 2.37
MMP28-207ENST00000619655 PRG4Q92954 1404 aaPredicted RBP29.8■■■□□ 2.36
MMP28-207ENST00000619655 PTPN23Q9H3S7 1636 aa29.78■■■□□ 2.36
MMP28-207ENST00000619655 CDK11AQ9UQ88 783 aaPredicted RBP29.76■■■□□ 2.35
MMP28-207ENST00000619655 CLSPNQ9HAW4 1339 aa29.73■■■□□ 2.35
MMP28-207ENST00000619655 PTPRKQ15262 1439 aa29.71■■■□□ 2.35
MMP28-207ENST00000619655 ABCA8O94911 1581 aa29.66■■■□□ 2.34
MMP28-207ENST00000619655 PTPRGP23470 1445 aa29.66■■■□□ 2.34
MMP28-207ENST00000619655 TROQ12816 1431 aaPredicted RBP29.63■■■□□ 2.33
MMP28-207ENST00000619655 TCOF1Q13428 1488 aaKnown RBP29.63■■■□□ 2.33
MMP28-207ENST00000619655 MIA2Q96PC5 1412 aa29.62■■■□□ 2.33
MMP28-207ENST00000619655 CHIC2Q9UKJ5 165 aa29.61■■■□□ 2.33
MMP28-207ENST00000619655 SHROOM2Q13796 1616 aa29.61■■■□□ 2.33
MMP28-207ENST00000619655 KIF14Q15058 1648 aa29.57■■■□□ 2.32
MMP28-207ENST00000619655 ERCC6L2Q5T890 1561 aa29.57■■■□□ 2.32
MMP28-207ENST00000619655 HFM1A2PYH4 1435 aa29.57■■■□□ 2.32
MMP28-207ENST00000619655 MAPKBP1O60336 1514 aa29.56■■■□□ 2.32
MMP28-207ENST00000619655 ATP10BO94823 1461 aa29.56■■■□□ 2.32
MMP28-207ENST00000619655 PLEKHD1A6NEE1 506 aa29.54■■■□□ 2.32
MMP28-207ENST00000619655 RRP7BPQ9NSQ0 103 aa29.53■■■□□ 2.32
MMP28-207ENST00000619655 ZNF644Q9H582 1327 aaPredicted RBP29.53■■■□□ 2.32
MMP28-207ENST00000619655 NAIPQ13075 1403 aa29.52■■■□□ 2.32
MMP28-207ENST00000619655 ADCY10Q96PN6 1610 aa29.49■■■□□ 2.31
MMP28-207ENST00000619655 CLASP1Q7Z460 1538 aa29.48■■■□□ 2.31
MMP28-207ENST00000619655 ZNF316A6NFI3 1004 aaPredicted RBP29.47■■■□□ 2.31
MMP28-207ENST00000619655 CFDP1Q9UEE9 299 aaPredicted RBP29.47■■■□□ 2.31
MMP28-207ENST00000619655 ZNF777Q9ULD5 760 aaPredicted RBP29.46■■■□□ 2.31
MMP28-207ENST00000619655 UACAQ9BZF9 1416 aa29.45■■■□□ 2.31
MMP28-207ENST00000619655 ITSN2Q9NZM3 1697 aa29.45■■■□□ 2.3
MMP28-207ENST00000619655 GPATCH8Q9UKJ3 1502 aaKnown RBP29.44■■■□□ 2.3
MMP28-207ENST00000619655 DAPK1P53355 1430 aa29.42■■■□□ 2.3
MMP28-207ENST00000619655 NEUROD1Q13562 356 aa29.4■■■□□ 2.3
MMP28-207ENST00000619655 SIN3AQ96ST3 1273 aa29.4■■■□□ 2.3
MMP28-207ENST00000619655 CAMSAP2Q08AD1 1489 aa29.39■■■□□ 2.3
MMP28-207ENST00000619655 DNMT1P26358 1616 aaKnown RBP29.39■■■□□ 2.3
MMP28-207ENST00000619655 GCC2Q8IWJ2 1684 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms