RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 PKNOX2Q96KN3 472 aa21.68■■□□□ 1.06
CNTNAP3B-214ENST00000618777 TSHZ2Q9NRE2 1034 aa21.65■■□□□ 1.06
CNTNAP3B-214ENST00000618777 RSPH6AQ9H0K4 717 aa21.65■■□□□ 1.06
CNTNAP3B-214ENST00000618777 PNNQ9H307 717 aaKnown RBP21.62■■□□□ 1.05
CNTNAP3B-214ENST00000618777 HSP90AA2PQ14568 343 aaPredicted RBP21.62■■□□□ 1.05
CNTNAP3B-214ENST00000618777 L1TD1Q5T7N2 865 aaKnown RBP21.6■■□□□ 1.05
CNTNAP3B-214ENST00000618777 ARID4BQ4LE39 1312 aaPredicted RBP21.57■■□□□ 1.04
CNTNAP3B-214ENST00000618777 PPP4R2Q9NY27 417 aa21.56■■□□□ 1.04
CNTNAP3B-214ENST00000618777 WDR43Q15061 677 aaKnown RBP eCLIP21.55■■□□□ 1.04
CNTNAP3B-214ENST00000618777 MYH16Q9H6N6 1097 aa21.52■■□□□ 1.04
CNTNAP3B-214ENST00000618777 A0A0U1RQG5 324 aaPredicted RBP21.48■■□□□ 1.03
CNTNAP3B-214ENST00000618777 MSNP26038 577 aaKnown RBP21.46■■□□□ 1.03
CNTNAP3B-214ENST00000618777 CHAF1AQ13111 956 aaPredicted RBP21.46■■□□□ 1.03
CNTNAP3B-214ENST00000618777 ZRSR1Q15695 479 aaKnown RBP21.45■■□□□ 1.02
CNTNAP3B-214ENST00000618777 TNNT3P45378 269 aaPredicted RBP21.44■■□□□ 1.02
CNTNAP3B-214ENST00000618777 ANO8Q9HCE9 1232 aaPredicted RBP21.43■■□□□ 1.02
CNTNAP3B-214ENST00000618777 GOLGA6L6A8MZA4 724 aa21.35■■□□□ 1.01
CNTNAP3B-214ENST00000618777 NRDCO43847 1150 aa21.34■■□□□ 1.01
CNTNAP3B-214ENST00000618777 PLCB2Q00722 1185 aa21.32■■□□□ 1
CNTNAP3B-214ENST00000618777 EIF4G2P78344 907 aaKnown RBP eCLIP21.3■■□□□ 1
CNTNAP3B-214ENST00000618777 TIMELESSQ9UNS1 1208 aa21.3■■□□□ 1
CNTNAP3B-214ENST00000618777 ARID3AQ99856 593 aa21.29■■□□□ 1
CNTNAP3B-214ENST00000618777 CASC1Q6TDU7 716 aa21.28■■□□□ 1
CNTNAP3B-214ENST00000618777 HSP90AB1P08238 724 aaKnown RBP21.23■□□□□ 0.99
CNTNAP3B-214ENST00000618777 HIRIP3Q9BW71 556 aaPredicted RBP21.23■□□□□ 0.99
CNTNAP3B-214ENST00000618777 B4GALNT3Q6L9W6 998 aa21.22■□□□□ 0.99
CNTNAP3B-214ENST00000618777 PTMSP20962 102 aa21.22■□□□□ 0.99
CNTNAP3B-214ENST00000618777 RGS3P49796 1198 aa21.21■□□□□ 0.99
CNTNAP3B-214ENST00000618777 P3H3Q8IVL6 736 aa21.21■□□□□ 0.99
CNTNAP3B-214ENST00000618777 USP35Q9P2H5 1018 aa21.21■□□□□ 0.99
CNTNAP3B-214ENST00000618777 ZNF777Q9ULD5 760 aaPredicted RBP21.19■□□□□ 0.98
CNTNAP3B-214ENST00000618777 IPO9Q96P70 1041 aaKnown RBP21.16■□□□□ 0.98
CNTNAP3B-214ENST00000618777 HSCBQ8IWL3 235 aa21.16■□□□□ 0.98
CNTNAP3B-214ENST00000618777 TPRNQ4KMQ1 711 aa21.15■□□□□ 0.98
CNTNAP3B-214ENST00000618777 CCDC180Q9P1Z9 1646 aa21.15■□□□□ 0.98
CNTNAP3B-214ENST00000618777 KIAA2012Q0VF49 1180 aa21.13■□□□□ 0.97
CNTNAP3B-214ENST00000618777 FTSJ3Q8IY81 847 aaKnown RBP21.09■□□□□ 0.97
CNTNAP3B-214ENST00000618777 GOLGA6L3A6NEY3 463 aa21.07■□□□□ 0.96
CNTNAP3B-214ENST00000618777 FANCIQ9NVI1 1328 aa21.05■□□□□ 0.96
CNTNAP3B-214ENST00000618777 ARID3CA6NKF2 412 aa21.05■□□□□ 0.96
CNTNAP3B-214ENST00000618777 GBP4Q96PP9 640 aa21.04■□□□□ 0.96
CNTNAP3B-214ENST00000618777 GSE1Q14687 1217 aa21.04■□□□□ 0.96
CNTNAP3B-214ENST00000618777 DRC7Q8IY82 874 aa21.03■□□□□ 0.96
CNTNAP3B-214ENST00000618777 GOLGA6L4A6NEF3 574 aa21.03■□□□□ 0.96
CNTNAP3B-214ENST00000618777 CHGAP10645 457 aaKnown RBP21.02■□□□□ 0.96
CNTNAP3B-214ENST00000618777 UBE2Q2Q8WVN8 375 aa21.02■□□□□ 0.96
CNTNAP3B-214ENST00000618777 APPP05067 770 aa21.01■□□□□ 0.95
CNTNAP3B-214ENST00000618777 CHMP4BQ9H444 224 aaKnown RBP21.01■□□□□ 0.95
CNTNAP3B-214ENST00000618777 KDM2AQ9Y2K7 1162 aa21■□□□□ 0.95
CNTNAP3B-214ENST00000618777 MS4A1P11836 297 aa20.99■□□□□ 0.95
CNTNAP3B-214ENST00000618777 TCERG1O14776 1098 aaKnown RBP20.97■□□□□ 0.95
CNTNAP3B-214ENST00000618777 CHIC2Q9UKJ5 165 aa20.97■□□□□ 0.95
CNTNAP3B-214ENST00000618777 CCER2I3L3R5 266 aa20.96■□□□□ 0.95
CNTNAP3B-214ENST00000618777 GZF1Q9H116 711 aaPredicted RBP20.95■□□□□ 0.94
CNTNAP3B-214ENST00000618777 CFAP53Q96M91 514 aa20.94■□□□□ 0.94
CNTNAP3B-214ENST00000618777 SENP3-EIF4A1A0A087X0R7 540 aa20.92■□□□□ 0.94
CNTNAP3B-214ENST00000618777 CFAP44Q96MT7 982 aa20.92■□□□□ 0.94
CNTNAP3B-214ENST00000618777 SPRYD3Q8NCJ5 442 aa20.91■□□□□ 0.94
CNTNAP3B-214ENST00000618777 CALRP27797 417 aaKnown RBP20.9■□□□□ 0.94
CNTNAP3B-214ENST00000618777 FRAT1Q92837 279 aaPredicted RBP20.89■□□□□ 0.94
CNTNAP3B-214ENST00000618777 ZNF771Q7L3S4 317 aaPredicted RBP20.89■□□□□ 0.93
CNTNAP3B-214ENST00000618777 SYAP1Q96A49 352 aaPredicted RBP20.88■□□□□ 0.93
CNTNAP3B-214ENST00000618777 STAG3Q9UJ98 1225 aa20.88■□□□□ 0.93
CNTNAP3B-214ENST00000618777 ZBTB7CA1YPR0 619 aa20.88■□□□□ 0.93
CNTNAP3B-214ENST00000618777 KNSTRNQ9Y448 316 aa20.87■□□□□ 0.93
CNTNAP3B-214ENST00000618777 SLKQ9H2G2 1235 aaPredicted RBP20.86■□□□□ 0.93
CNTNAP3B-214ENST00000618777 GOLGA6L1Q8N7Z2 621 aa20.86■□□□□ 0.93
CNTNAP3B-214ENST00000618777 CDCA8Q53HL2 280 aa20.86■□□□□ 0.93
CNTNAP3B-214ENST00000618777 FBLN2P98095 1184 aa20.84■□□□□ 0.93
CNTNAP3B-214ENST00000618777 MCCP23508 829 aa20.84■□□□□ 0.93
CNTNAP3B-214ENST00000618777 FGD1P98174 961 aa20.84■□□□□ 0.93
CNTNAP3B-214ENST00000618777 PDE4CQ08493 712 aa20.83■□□□□ 0.93
CNTNAP3B-214ENST00000618777 MAP7D2Q96T17 732 aa20.83■□□□□ 0.93
CNTNAP3B-214ENST00000618777 FAM13BQ9NYF5 915 aa20.83■□□□□ 0.92
CNTNAP3B-214ENST00000618777 IL27Q8NEV9 243 aa20.81■□□□□ 0.92
CNTNAP3B-214ENST00000618777 SETQ01105 290 aaPredicted RBP20.79■□□□□ 0.92
CNTNAP3B-214ENST00000618777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.79■□□□□ 0.924e-8■□□□□ 10.5
CNTNAP3B-214ENST00000618777 KCNJ4P48050 445 aa20.79■□□□□ 0.92
CNTNAP3B-214ENST00000618777 TSPY4P0CV99 314 aa20.78■□□□□ 0.92
CNTNAP3B-214ENST00000618777 TSPY10P0CW01 314 aa20.78■□□□□ 0.92
CNTNAP3B-214ENST00000618777 NEUROD2Q15784 382 aa20.76■□□□□ 0.91
CNTNAP3B-214ENST00000618777 MTUS2Q5JR59 1369 aa20.75■□□□□ 0.91
CNTNAP3B-214ENST00000618777 MAPK8IP3Q9UPT6 1336 aa20.75■□□□□ 0.91
CNTNAP3B-214ENST00000618777 MTERF4Q7Z6M4 381 aaKnown RBP20.75■□□□□ 0.91
CNTNAP3B-214ENST00000618777 CALD1Q05682 793 aaKnown RBP20.75■□□□□ 0.91
CNTNAP3B-214ENST00000618777 CLIP1P30622 1438 aa20.75■□□□□ 0.91
CNTNAP3B-214ENST00000618777 ESF1Q9H501 851 aaKnown RBP20.74■□□□□ 0.91
CNTNAP3B-214ENST00000618777 RRP9O43818 475 aaKnown RBP20.72■□□□□ 0.91
CNTNAP3B-214ENST00000618777 NOC3LQ8WTT2 800 aaKnown RBP20.72■□□□□ 0.91
CNTNAP3B-214ENST00000618777 NUDCQ9Y266 331 aa20.71■□□□□ 0.91
CNTNAP3B-214ENST00000618777 CARD11Q9BXL7 1154 aa20.7■□□□□ 0.9
CNTNAP3B-214ENST00000618777 HTATSF1O43719 755 aaKnown RBP20.69■□□□□ 0.9
CNTNAP3B-214ENST00000618777 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.69■□□□□ 0.9
CNTNAP3B-214ENST00000618777 FAM43AQ8N2R8 423 aa20.69■□□□□ 0.9
CNTNAP3B-214ENST00000618777 DDX11L8A8MPP1 907 aa20.68■□□□□ 0.9
CNTNAP3B-214ENST00000618777 TPM2P07951 284 aa20.67■□□□□ 0.9
CNTNAP3B-214ENST00000618777 RRP7BPQ9NSQ0 103 aa20.67■□□□□ 0.9
CNTNAP3B-214ENST00000618777 NAP1L2Q9ULW6 460 aaPredicted RBP20.67■□□□□ 0.9
CNTNAP3B-214ENST00000618777 MYO15BQ96JP2 1530 aa20.67■□□□□ 0.9
CNTNAP3B-214ENST00000618777 TPM4P67936 248 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms