RNA–Protein interactions for RNA: ENST00000618626.1

SLC46A1-208, Transcript of solute carrier family 46 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC46A1, Length 5,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-208ENST00000618626 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
SLC46A1-208ENST00000618626 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
SLC46A1-208ENST00000618626 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.3■□□□□ 0.52
SLC46A1-208ENST00000618626 SOGA1O94964 1423 aa18.3■□□□□ 0.52
SLC46A1-208ENST00000618626 WDR43Q15061 677 aaKnown RBP eCLIP18.29■□□□□ 0.52
SLC46A1-208ENST00000618626 CCDC88BA6NC98 1476 aa18.29■□□□□ 0.52
SLC46A1-208ENST00000618626 NPM2Q86SE8 214 aaKnown RBP18.28■□□□□ 0.52
SLC46A1-208ENST00000618626 HIRIP3Q9BW71 556 aaPredicted RBP18.27■□□□□ 0.52
SLC46A1-208ENST00000618626 CCDC136Q96JN2 1154 aa18.27■□□□□ 0.51
SLC46A1-208ENST00000618626 CFDP1Q9UEE9 299 aaPredicted RBP18.27■□□□□ 0.51
SLC46A1-208ENST00000618626 BCL11AQ9H165 835 aa18.25■□□□□ 0.51
SLC46A1-208ENST00000618626 SALL2Q9Y467 1007 aaPredicted RBP18.25■□□□□ 0.51
SLC46A1-208ENST00000618626 CARMIL1Q5VZK9 1371 aa18.25■□□□□ 0.51
SLC46A1-208ENST00000618626 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
SLC46A1-208ENST00000618626 SMARCA2P51531 1590 aa18.24■□□□□ 0.51
SLC46A1-208ENST00000618626 CCNB3Q8WWL7 1395 aa18.23■□□□□ 0.51
SLC46A1-208ENST00000618626 CUX2O14529 1486 aa18.23■□□□□ 0.51
SLC46A1-208ENST00000618626 UPF2Q9HAU5 1272 aaKnown RBP18.22■□□□□ 0.51
SLC46A1-208ENST00000618626 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
SLC46A1-208ENST00000618626 KCNH8Q96L42 1107 aa18.19■□□□□ 0.5
SLC46A1-208ENST00000618626 ABCC8Q09428 1581 aa18.16■□□□□ 0.5
SLC46A1-208ENST00000618626 TOP2AP11388 1531 aaKnown RBP18.16■□□□□ 0.5
SLC46A1-208ENST00000618626 TIMELESSQ9UNS1 1208 aa18.15■□□□□ 0.5
SLC46A1-208ENST00000618626 CDCA8Q53HL2 280 aa18.13■□□□□ 0.49
SLC46A1-208ENST00000618626 ERCC6Q03468 1493 aa18.12■□□□□ 0.49
SLC46A1-208ENST00000618626 SIN3AQ96ST3 1273 aa18.1■□□□□ 0.49
SLC46A1-208ENST00000618626 RGL3Q3MIN7 710 aa18.1■□□□□ 0.49
SLC46A1-208ENST00000618626 HSP90AA1P07900 732 aaKnown RBP18.08■□□□□ 0.49
SLC46A1-208ENST00000618626 CARD11Q9BXL7 1154 aa18.08■□□□□ 0.49
SLC46A1-208ENST00000618626 WIZO95785 1651 aa18.08■□□□□ 0.48
SLC46A1-208ENST00000618626 IRX6P78412 446 aaPredicted RBP18.05■□□□□ 0.48
SLC46A1-208ENST00000618626 EIF4G1Q04637 1599 aaKnown RBP18.05■□□□□ 0.48
SLC46A1-208ENST00000618626 SETD5Q9C0A6 1442 aa18.04■□□□□ 0.48
SLC46A1-208ENST00000618626 ARHGAP35Q9NRY4 1499 aa18.04■□□□□ 0.48
SLC46A1-208ENST00000618626 PLPPR3Q6T4P5 718 aa18.02■□□□□ 0.48
SLC46A1-208ENST00000618626 KNSTRNQ9Y448 316 aa18.02■□□□□ 0.48
SLC46A1-208ENST00000618626 ANP32BQ92688 251 aaKnown RBP18■□□□□ 0.47
SLC46A1-208ENST00000618626 PDS5BQ9NTI5 1447 aa18■□□□□ 0.47
SLC46A1-208ENST00000618626 CFAP53Q96M91 514 aa17.99■□□□□ 0.47
SLC46A1-208ENST00000618626 PPP1R15AO75807 674 aaPredicted RBP17.98■□□□□ 0.47
SLC46A1-208ENST00000618626 FMN1Q68DA7 1419 aa17.97■□□□□ 0.47
SLC46A1-208ENST00000618626 KANK4Q5T7N3 995 aaPredicted RBP17.97■□□□□ 0.47
SLC46A1-208ENST00000618626 MYH16Q9H6N6 1097 aa17.94■□□□□ 0.46
SLC46A1-208ENST00000618626 SUPT16HQ9Y5B9 1047 aaKnown RBP17.93■□□□□ 0.46
SLC46A1-208ENST00000618626 SMARCA4P51532 1647 aa17.92■□□□□ 0.46
SLC46A1-208ENST00000618626 CCER2I3L3R5 266 aa17.9■□□□□ 0.46
SLC46A1-208ENST00000618626 CARMIL2Q6F5E8 1435 aa17.9■□□□□ 0.46
SLC46A1-208ENST00000618626 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
SLC46A1-208ENST00000618626 ATAD2BQ9ULI0 1458 aa17.9■□□□□ 0.46
SLC46A1-208ENST00000618626 DDRGK1Q96HY6 314 aa17.89■□□□□ 0.45
SLC46A1-208ENST00000618626 RAPGEF2Q9Y4G8 1499 aa17.88■□□□□ 0.45
SLC46A1-208ENST00000618626 RAB3GAP2Q9H2M9 1393 aa17.87■□□□□ 0.45
SLC46A1-208ENST00000618626 PPP4R2Q9NY27 417 aa17.86■□□□□ 0.45
SLC46A1-208ENST00000618626 NBR1Q14596 966 aa17.86■□□□□ 0.45
SLC46A1-208ENST00000618626 KANK1Q14678 1352 aa17.86■□□□□ 0.45
SLC46A1-208ENST00000618626 TDRD9Q8NDG6 1382 aaKnown RBP17.85■□□□□ 0.45
SLC46A1-208ENST00000618626 DCAF11Q8TEB1 546 aa17.85■□□□□ 0.45
SLC46A1-208ENST00000618626 TMF1P82094 1093 aa17.85■□□□□ 0.45
SLC46A1-208ENST00000618626 BECN1Q14457 450 aa17.83■□□□□ 0.44
SLC46A1-208ENST00000618626 NUDCQ9Y266 331 aa17.82■□□□□ 0.44
SLC46A1-208ENST00000618626 HSPA5P11021 654 aaKnown RBP17.8■□□□□ 0.44
SLC46A1-208ENST00000618626 SENP3Q9H4L4 574 aaPredicted RBP17.79■□□□□ 0.44
SLC46A1-208ENST00000618626 PKD2Q13563 968 aa17.78■□□□□ 0.44
SLC46A1-208ENST00000618626 MAPK8IP3Q9UPT6 1336 aa17.78■□□□□ 0.44
SLC46A1-208ENST00000618626 POGKQ9P215 609 aa17.78■□□□□ 0.44
SLC46A1-208ENST00000618626 MPHOSPH9Q99550 1183 aa17.77■□□□□ 0.44
SLC46A1-208ENST00000618626 CC2D1BQ5T0F9 858 aaKnown RBP17.76■□□□□ 0.43
SLC46A1-208ENST00000618626 ARID4BQ4LE39 1312 aaPredicted RBP17.76■□□□□ 0.43
SLC46A1-208ENST00000618626 ANKRD30AQ9BXX3 1397 aa17.76■□□□□ 0.43
SLC46A1-208ENST00000618626 C14orf37Q86TY3 774 aa17.75■□□□□ 0.43
SLC46A1-208ENST00000618626 EIF5BO60841 1220 aaKnown RBP17.74■□□□□ 0.43
SLC46A1-208ENST00000618626 FTSJ3Q8IY81 847 aaKnown RBP17.74■□□□□ 0.43
SLC46A1-208ENST00000618626 SENP3-EIF4A1A0A087X0R7 540 aa17.74■□□□□ 0.43
SLC46A1-208ENST00000618626 FHOD3Q2V2M9 1422 aa17.74■□□□□ 0.43
SLC46A1-208ENST00000618626 PPM1GO15355 546 aaPredicted RBP17.72■□□□□ 0.43
SLC46A1-208ENST00000618626 PNNQ9H307 717 aaKnown RBP17.71■□□□□ 0.43
SLC46A1-208ENST00000618626 MS4A1P11836 297 aa17.71■□□□□ 0.43
SLC46A1-208ENST00000618626 NEUROD2Q15784 382 aa17.71■□□□□ 0.43
SLC46A1-208ENST00000618626 ANP32EQ9BTT0 268 aa17.71■□□□□ 0.43
SLC46A1-208ENST00000618626 CCDC18Q5T9S5 1454 aa17.7■□□□□ 0.42
SLC46A1-208ENST00000618626 CHMP4BQ9H444 224 aaKnown RBP17.7■□□□□ 0.42
SLC46A1-208ENST00000618626 NUP155O75694 1391 aa17.69■□□□□ 0.42
SLC46A1-208ENST00000618626 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
SLC46A1-208ENST00000618626 ZBTB7CA1YPR0 619 aa17.69■□□□□ 0.42
SLC46A1-208ENST00000618626 EFCAB2Q5VUJ9 269 aa17.69■□□□□ 0.42
SLC46A1-208ENST00000618626 FOXD1Q16676 465 aa17.68■□□□□ 0.42
SLC46A1-208ENST00000618626 KTN1Q86UP2 1357 aaKnown RBP17.67■□□□□ 0.42
SLC46A1-208ENST00000618626 RSPH4AQ5TD94 716 aa17.67■□□□□ 0.42
SLC46A1-208ENST00000618626 HDGFP51858 240 aaKnown RBP17.65■□□□□ 0.42
SLC46A1-208ENST00000618626 ERICH6BQ5W0A0 696 aa17.65■□□□□ 0.42
SLC46A1-208ENST00000618626 FANCD2Q9BXW9 1451 aa17.64■□□□□ 0.41
SLC46A1-208ENST00000618626 TNNT2P45379 298 aaPredicted RBP17.64■□□□□ 0.41
SLC46A1-208ENST00000618626 RALBP1Q15311 655 aa17.64■□□□□ 0.41
SLC46A1-208ENST00000618626 GOLGA6L22H0YM25 854 aa17.63■□□□□ 0.41
SLC46A1-208ENST00000618626 CASC1Q6TDU7 716 aa17.63■□□□□ 0.41
SLC46A1-208ENST00000618626 ROCK2O75116 1388 aaKnown RBP17.63■□□□□ 0.41
SLC46A1-208ENST00000618626 FRAT1Q92837 279 aaPredicted RBP17.63■□□□□ 0.41
SLC46A1-208ENST00000618626 U2SURPO15042 1029 aaKnown RBP17.62■□□□□ 0.41
SLC46A1-208ENST00000618626 LAS1LQ9Y4W2 734 aaKnown RBP17.62■□□□□ 0.41
SLC46A1-208ENST00000618626 B4GALNT3Q6L9W6 998 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms