RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 TPRNQ4KMQ1 711 aa17.03■□□□□ 0.32
MATR3-227ENST00000618441 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
MATR3-227ENST00000618441 B4GALNT3Q6L9W6 998 aa17■□□□□ 0.31
MATR3-227ENST00000618441 BAZ1AQ9NRL2 1556 aaPredicted RBP17■□□□□ 0.31
MATR3-227ENST00000618441 ZBTB47Q9UFB7 747 aaPredicted RBP16.99■□□□□ 0.31
MATR3-227ENST00000618441 ANP32AP39687 249 aaKnown RBP16.98■□□□□ 0.31
MATR3-227ENST00000618441 AMER1Q5JTC6 1135 aaPredicted RBP16.97■□□□□ 0.31
MATR3-227ENST00000618441 HNRNPUQ00839 825 aaKnown RBP eCLIP16.97■□□□□ 0.31
MATR3-227ENST00000618441 DHX37Q8IY37 1157 aaKnown RBP16.95■□□□□ 0.3
MATR3-227ENST00000618441 ANP32CO43423 234 aa16.92■□□□□ 0.3
MATR3-227ENST00000618441 CCDC88BA6NC98 1476 aa16.91■□□□□ 0.3
MATR3-227ENST00000618441 VSIG10Q8N0Z9 540 aa16.91■□□□□ 0.3
MATR3-227ENST00000618441 KCNA4P22459 653 aa16.9■□□□□ 0.3
MATR3-227ENST00000618441 NEFMP07197 916 aa16.9■□□□□ 0.3
MATR3-227ENST00000618441 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
MATR3-227ENST00000618441 BRPF3Q9ULD4 1205 aa16.89■□□□□ 0.29
MATR3-227ENST00000618441 UNC13AQ9UPW8 1703 aa16.88■□□□□ 0.29
MATR3-227ENST00000618441 BICRAQ9NZM4 1560 aa16.88■□□□□ 0.29
MATR3-227ENST00000618441 CNGB1Q14028 1251 aaPredicted RBP16.88■□□□□ 0.29
MATR3-227ENST00000618441 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
MATR3-227ENST00000618441 TAOK2Q9UL54 1235 aa16.86■□□□□ 0.29
MATR3-227ENST00000618441 GLIPR1L2Q4G1C9 344 aa16.83■□□□□ 0.28
MATR3-227ENST00000618441 BAZ1BQ9UIG0 1483 aaKnown RBP16.82■□□□□ 0.28
MATR3-227ENST00000618441 BCL11BQ9C0K0 894 aaPredicted RBP16.81■□□□□ 0.28
MATR3-227ENST00000618441 SENP3-EIF4A1A0A087X0R7 540 aa16.79■□□□□ 0.28
MATR3-227ENST00000618441 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
MATR3-227ENST00000618441 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
MATR3-227ENST00000618441 PPP4R2Q9NY27 417 aa16.77■□□□□ 0.27
MATR3-227ENST00000618441 CEP162Q5TB80 1403 aa16.75■□□□□ 0.27
MATR3-227ENST00000618441 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
MATR3-227ENST00000618441 SOGA1O94964 1423 aa16.74■□□□□ 0.27
MATR3-227ENST00000618441 IPO9Q96P70 1041 aaKnown RBP16.73■□□□□ 0.27
MATR3-227ENST00000618441 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
MATR3-227ENST00000618441 ATP1B4Q9UN42 357 aaPredicted RBP16.71■□□□□ 0.27
MATR3-227ENST00000618441 CHMP4AQ9BY43 222 aa16.71■□□□□ 0.27
MATR3-227ENST00000618441 ZMYND15Q9H091 742 aa16.7■□□□□ 0.26
MATR3-227ENST00000618441 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
MATR3-227ENST00000618441 ARID4BQ4LE39 1312 aaPredicted RBP16.68■□□□□ 0.26
MATR3-227ENST00000618441 FAM9BQ8IZU0 186 aa16.67■□□□□ 0.26
MATR3-227ENST00000618441 RUSC2Q8N2Y8 1516 aa16.66■□□□□ 0.26
MATR3-227ENST00000618441 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
MATR3-227ENST00000618441 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.256e-9■■■■■ 30.6
MATR3-227ENST00000618441 NAP1L5Q96NT1 182 aaPredicted RBP16.59■□□□□ 0.25
MATR3-227ENST00000618441 P3H3Q8IVL6 736 aa16.57■□□□□ 0.24
MATR3-227ENST00000618441 RSPH6AQ9H0K4 717 aa16.56■□□□□ 0.24
MATR3-227ENST00000618441 EIF4G1Q04637 1599 aaKnown RBP16.56■□□□□ 0.24
MATR3-227ENST00000618441 DHX57Q6P158 1386 aaKnown RBP16.55■□□□□ 0.24
MATR3-227ENST00000618441 CFAP44Q96MT7 982 aa16.54■□□□□ 0.24
MATR3-227ENST00000618441 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
MATR3-227ENST00000618441 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
MATR3-227ENST00000618441 GSE1Q14687 1217 aa16.52■□□□□ 0.24
MATR3-227ENST00000618441 CCER2I3L3R5 266 aa16.5■□□□□ 0.23
MATR3-227ENST00000618441 FRAT1Q92837 279 aaPredicted RBP16.49■□□□□ 0.23
MATR3-227ENST00000618441 PPM1GO15355 546 aaPredicted RBP16.48■□□□□ 0.23
MATR3-227ENST00000618441 HSP90AA2PQ14568 343 aaPredicted RBP16.48■□□□□ 0.23
MATR3-227ENST00000618441 TAF7LQ5H9L4 462 aa16.45■□□□□ 0.22
MATR3-227ENST00000618441 CDK11BP21127 795 aaKnown RBP16.42■□□□□ 0.22
MATR3-227ENST00000618441 ARID3CA6NKF2 412 aa16.42■□□□□ 0.22
MATR3-227ENST00000618441 C11orf95C9JLR9 678 aaPredicted RBP16.42■□□□□ 0.22
MATR3-227ENST00000618441 PPP1R15AO75807 674 aaPredicted RBP16.42■□□□□ 0.22
MATR3-227ENST00000618441 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
MATR3-227ENST00000618441 TNIKQ9UKE5 1360 aa16.4■□□□□ 0.22
MATR3-227ENST00000618441 WASHC2AQ641Q2 1341 aa16.39■□□□□ 0.21
MATR3-227ENST00000618441 HSP90AA1P07900 732 aaKnown RBP16.39■□□□□ 0.21
MATR3-227ENST00000618441 USP35Q9P2H5 1018 aa16.39■□□□□ 0.21
MATR3-227ENST00000618441 NESP48681 1621 aa16.37■□□□□ 0.21
MATR3-227ENST00000618441 NFKBIBQ15653 356 aa16.36■□□□□ 0.21
MATR3-227ENST00000618441 FBLN2P98095 1184 aa16.34■□□□□ 0.21
MATR3-227ENST00000618441 NCAPD3P42695 1498 aa16.34■□□□□ 0.21
MATR3-227ENST00000618441 FAM50AQ14320 339 aaKnown RBP16.33■□□□□ 0.21
MATR3-227ENST00000618441 ARID3AQ99856 593 aa16.33■□□□□ 0.2
MATR3-227ENST00000618441 CC2D2AQ9P2K1 1620 aa16.33■□□□□ 0.2
MATR3-227ENST00000618441 FGD1P98174 961 aa16.32■□□□□ 0.2
MATR3-227ENST00000618441 CCDC184Q52MB2 194 aa16.31■□□□□ 0.2
MATR3-227ENST00000618441 WASHC2CQ9Y4E1 1318 aa16.31■□□□□ 0.2
MATR3-227ENST00000618441 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
MATR3-227ENST00000618441 PNNQ9H307 717 aaKnown RBP16.31■□□□□ 0.2
MATR3-227ENST00000618441 BRD2P25440 801 aaKnown RBP16.3■□□□□ 0.2
MATR3-227ENST00000618441 CADPSQ9ULU8 1353 aa16.29■□□□□ 0.2
MATR3-227ENST00000618441 PDE4AP27815 886 aa16.29■□□□□ 0.2
MATR3-227ENST00000618441 FAM43AQ8N2R8 423 aa16.29■□□□□ 0.2
MATR3-227ENST00000618441 RBM10P98175 930 aaKnown RBP16.28■□□□□ 0.2
MATR3-227ENST00000618441 KANK4Q5T7N3 995 aaPredicted RBP16.27■□□□□ 0.2
MATR3-227ENST00000618441 CLIP1P30622 1438 aa16.27■□□□□ 0.19
MATR3-227ENST00000618441 SKAP1Q86WV1 359 aa16.26■□□□□ 0.19
MATR3-227ENST00000618441 FRAT2O75474 233 aaPredicted RBP16.26■□□□□ 0.19
MATR3-227ENST00000618441 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
MATR3-227ENST00000618441 RAPGEF2Q9Y4G8 1499 aa16.25■□□□□ 0.19
MATR3-227ENST00000618441 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
MATR3-227ENST00000618441 CUX2O14529 1486 aa16.23■□□□□ 0.19
MATR3-227ENST00000618441 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
MATR3-227ENST00000618441 RRAGDQ9NQL2 400 aaPredicted RBP16.21■□□□□ 0.19
MATR3-227ENST00000618441 GOLGA3Q08378 1498 aa16.2■□□□□ 0.18
MATR3-227ENST00000618441 DDRGK1Q96HY6 314 aa16.2■□□□□ 0.18
MATR3-227ENST00000618441 AKNAQ7Z591 1439 aa16.18■□□□□ 0.18
MATR3-227ENST00000618441 GZF1Q9H116 711 aaPredicted RBP16.18■□□□□ 0.18
MATR3-227ENST00000618441 PEG3Q9GZU2 1588 aa16.18■□□□□ 0.18
MATR3-227ENST00000618441 TONSLQ96HA7 1378 aa16.16■□□□□ 0.18
MATR3-227ENST00000618441 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
MATR3-227ENST00000618441 KIF27Q86VH2 1401 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms