RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 PCGF6Q9BYE7 350 aa23.75■■□□□ 1.39
NOP56-220ENST00000616692 WRNQ14191 1432 aaPredicted RBP eCLIP23.74■■□□□ 1.39
NOP56-220ENST00000616692 ANP32EQ9BTT0 268 aa23.74■■□□□ 1.39
NOP56-220ENST00000616692 EIF5BO60841 1220 aaKnown RBP23.73■■□□□ 1.39
NOP56-220ENST00000616692 BIVM-ERCC5R4GMW8 1640 aa23.72■■□□□ 1.39
NOP56-220ENST00000616692 GRIN2AQ12879 1464 aa23.72■■□□□ 1.39
NOP56-220ENST00000616692 NUP160Q12769 1436 aa23.71■■□□□ 1.39
NOP56-220ENST00000616692 ADAMTS12P58397 1594 aa23.7■■□□□ 1.38
NOP56-220ENST00000616692 TOP2BQ02880 1626 aa23.69■■□□□ 1.38
NOP56-220ENST00000616692 NEUROD1Q13562 356 aa23.67■■□□□ 1.38
NOP56-220ENST00000616692 FHAD1B1AJZ9 1412 aa23.66■■□□□ 1.38
NOP56-220ENST00000616692 ERICH3Q5RHP9 1530 aa23.65■■□□□ 1.38
NOP56-220ENST00000616692 SHROOM2Q13796 1616 aa23.65■■□□□ 1.38
NOP56-220ENST00000616692 CEP170Q5SW79 1584 aa23.6■■□□□ 1.37
NOP56-220ENST00000616692 ERCC6L2Q5T890 1561 aa23.49■■□□□ 1.35
NOP56-220ENST00000616692 CSRNP3Q8WYN3 585 aa23.46■■□□□ 1.35
NOP56-220ENST00000616692 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
NOP56-220ENST00000616692 ZEB1P37275 1124 aaPredicted RBP23.41■■□□□ 1.34
NOP56-220ENST00000616692 PRG4Q92954 1404 aaPredicted RBP23.37■■□□□ 1.33
NOP56-220ENST00000616692 AEBP2Q6ZN18 517 aaPredicted RBP23.37■■□□□ 1.33
NOP56-220ENST00000616692 RUSC2Q8N2Y8 1516 aa23.35■■□□□ 1.33
NOP56-220ENST00000616692 JPH4Q96JJ6 628 aa23.33■■□□□ 1.33
NOP56-220ENST00000616692 UBE2Q2Q8WVN8 375 aa23.31■■□□□ 1.32
NOP56-220ENST00000616692 MAPKBP1O60336 1514 aa23.31■■□□□ 1.32
NOP56-220ENST00000616692 KIF13AQ9H1H9 1805 aa23.31■■□□□ 1.32
NOP56-220ENST00000616692 CUL7Q14999 1698 aa23.27■■□□□ 1.32
NOP56-220ENST00000616692 KIAA0586Q9BVV6 1533 aa23.26■■□□□ 1.31
NOP56-220ENST00000616692 ABCC10Q5T3U5 1492 aa23.25■■□□□ 1.31
NOP56-220ENST00000616692 KIF27Q86VH2 1401 aa23.2■■□□□ 1.31
NOP56-220ENST00000616692 NPM1P06748 294 aaKnown RBP eCLIP23.2■■□□□ 1.3
NOP56-220ENST00000616692 PLEKHG5O94827 1062 aa23.2■■□□□ 1.3
NOP56-220ENST00000616692 ANO8Q9HCE9 1232 aaPredicted RBP23.2■■□□□ 1.3
NOP56-220ENST00000616692 IGF1RP08069 1367 aa23.18■■□□□ 1.3
NOP56-220ENST00000616692 DIP2BQ9P265 1576 aa23.15■■□□□ 1.3
NOP56-220ENST00000616692 ADCY10Q96PN6 1610 aa23.15■■□□□ 1.3
NOP56-220ENST00000616692 FAM69CQ0P6D2 419 aa23.08■■□□□ 1.29
NOP56-220ENST00000616692 CARMIL2Q6F5E8 1435 aa23.03■■□□□ 1.28
NOP56-220ENST00000616692 UHRF1BP1LA0JNW5 1464 aa23.02■■□□□ 1.28
NOP56-220ENST00000616692 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
NOP56-220ENST00000616692 PTPRGP23470 1445 aa23.01■■□□□ 1.27
NOP56-220ENST00000616692 TNIKQ9UKE5 1360 aa23■■□□□ 1.27
NOP56-220ENST00000616692 GLI2P10070 1586 aa23■■□□□ 1.27
NOP56-220ENST00000616692 KDM6BO15054 1643 aa22.98■■□□□ 1.27
NOP56-220ENST00000616692 ABCC2Q92887 1545 aa22.98■■□□□ 1.27
NOP56-220ENST00000616692 PLB1Q6P1J6 1458 aa22.97■■□□□ 1.27
NOP56-220ENST00000616692 IQGAP2Q13576 1575 aa22.95■■□□□ 1.27
NOP56-220ENST00000616692 PODXL2Q9NZ53 605 aa22.88■■□□□ 1.25
NOP56-220ENST00000616692 UGGT2Q9NYU1 1516 aa22.88■■□□□ 1.25
NOP56-220ENST00000616692 UACAQ9BZF9 1416 aa22.86■■□□□ 1.25
NOP56-220ENST00000616692 ASXL2Q76L83 1435 aa22.85■■□□□ 1.25
NOP56-220ENST00000616692 KDM5BQ9UGL1 1544 aa22.84■■□□□ 1.25
NOP56-220ENST00000616692 DISP1Q96F81 1524 aa22.83■■□□□ 1.25
NOP56-220ENST00000616692 RAPGEF2Q9Y4G8 1499 aa22.82■■□□□ 1.24
NOP56-220ENST00000616692 PPRC1Q5VV67 1664 aaKnown RBP22.8■■□□□ 1.24
NOP56-220ENST00000616692 TSPOAP1O95153 1857 aa22.79■■□□□ 1.24
NOP56-220ENST00000616692 PKNOX2Q96KN3 472 aa22.79■■□□□ 1.24
NOP56-220ENST00000616692 TEX14Q8IWB6 1497 aa22.77■■□□□ 1.24
NOP56-220ENST00000616692 MAP3K4Q9Y6R4 1608 aa22.76■■□□□ 1.23
NOP56-220ENST00000616692 KDM4FA0A1W2PPD8 638 aa22.76■■□□□ 1.23
NOP56-220ENST00000616692 EPRSP07814 1512 aaKnown RBP22.75■■□□□ 1.23
NOP56-220ENST00000616692 KIAA0556O60303 1618 aa22.75■■□□□ 1.23
NOP56-220ENST00000616692 GOLGA3Q08378 1498 aa22.7■■□□□ 1.22
NOP56-220ENST00000616692 ZCCHC11Q5TAX3 1644 aaKnown RBP22.7■■□□□ 1.22
NOP56-220ENST00000616692 SALL2Q9Y467 1007 aaPredicted RBP22.66■■□□□ 1.22
NOP56-220ENST00000616692 TSHZ2Q9NRE2 1034 aa22.65■■□□□ 1.22
NOP56-220ENST00000616692 CTTNBP2Q8WZ74 1663 aa22.64■■□□□ 1.22
NOP56-220ENST00000616692 WDR7Q9Y4E6 1490 aa22.64■■□□□ 1.21
NOP56-220ENST00000616692 MAGI3Q5TCQ9 1506 aa22.61■■□□□ 1.21
NOP56-220ENST00000616692 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
NOP56-220ENST00000616692 ABCA8O94911 1581 aa22.6■■□□□ 1.21
NOP56-220ENST00000616692 ADGRL1O94910 1474 aa22.59■■□□□ 1.21
NOP56-220ENST00000616692 CFAP43Q8NDM7 1665 aa22.59■■□□□ 1.21
NOP56-220ENST00000616692 COL17A1Q9UMD9 1497 aaPredicted RBP22.57■■□□□ 1.2
NOP56-220ENST00000616692 PRXQ9BXM0 1461 aa22.55■■□□□ 1.2
NOP56-220ENST00000616692 CCDC136Q96JN2 1154 aa22.54■■□□□ 1.2
NOP56-220ENST00000616692 ERICH6BQ5W0A0 696 aa22.52■■□□□ 1.2
NOP56-220ENST00000616692 PHLDB1Q86UU1 1377 aa22.49■■□□□ 1.19
NOP56-220ENST00000616692 CD109Q6YHK3 1445 aa22.48■■□□□ 1.19
NOP56-220ENST00000616692 ARAP3Q8WWN8 1544 aa22.45■■□□□ 1.18
NOP56-220ENST00000616692 DIEXFQ68CQ4 756 aaKnown RBP22.37■■□□□ 1.17
NOP56-220ENST00000616692 ABCA9Q8IUA7 1624 aa22.36■■□□□ 1.17
NOP56-220ENST00000616692 SAMD9Q5K651 1589 aa22.35■■□□□ 1.17
NOP56-220ENST00000616692 HECW2Q9P2P5 1572 aa22.34■■□□□ 1.17
NOP56-220ENST00000616692 MYT1LQ9UL68 1186 aa22.34■■□□□ 1.17
NOP56-220ENST00000616692 ATP10BO94823 1461 aa22.33■■□□□ 1.17
NOP56-220ENST00000616692 NEO1Q92859 1461 aa22.32■■□□□ 1.16
NOP56-220ENST00000616692 CLSPNQ9HAW4 1339 aa22.31■■□□□ 1.16
NOP56-220ENST00000616692 EEA1Q15075 1411 aa22.3■■□□□ 1.16
NOP56-220ENST00000616692 KCNH8Q96L42 1107 aa22.28■■□□□ 1.16
NOP56-220ENST00000616692 RAPGEF6Q8TEU7 1601 aa22.27■■□□□ 1.16
NOP56-220ENST00000616692 ILDR1Q86SU0 546 aaPredicted RBP22.24■■□□□ 1.15
NOP56-220ENST00000616692 KIF21BO75037 1637 aa22.22■■□□□ 1.15
NOP56-220ENST00000616692 ADAMTSL3P82987 1691 aa22.21■■□□□ 1.15
NOP56-220ENST00000616692 NCBP3Q53F19 620 aaKnown RBP22.19■■□□□ 1.14
NOP56-220ENST00000616692 SUPT16HQ9Y5B9 1047 aaKnown RBP22.19■■□□□ 1.14
NOP56-220ENST00000616692 NEFLP07196 543 aa22.18■■□□□ 1.14
NOP56-220ENST00000616692 CFAP74Q9C0B2 1584 aa22.16■■□□□ 1.14
NOP56-220ENST00000616692 DEKP35659 375 aaKnown RBP22.15■■□□□ 1.14
NOP56-220ENST00000616692 NUP153P49790 1475 aaKnown RBP22.15■■□□□ 1.14
NOP56-220ENST00000616692 EFCAB5A4FU69 1503 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms