RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
PPP4R3B-205ENST00000616288 BRPF3Q9ULD4 1205 aa18.19■□□□□ 0.5
PPP4R3B-205ENST00000616288 A0A0U1RQG5 324 aaPredicted RBP18.17■□□□□ 0.5
PPP4R3B-205ENST00000616288 HSP90AA1P07900 732 aaKnown RBP18.14■□□□□ 0.5
PPP4R3B-205ENST00000616288 HSP90AA2PQ14568 343 aaPredicted RBP18.13■□□□□ 0.49
PPP4R3B-205ENST00000616288 DDRGK1Q96HY6 314 aa18.13■□□□□ 0.49
PPP4R3B-205ENST00000616288 CCER2I3L3R5 266 aa18.11■□□□□ 0.49
PPP4R3B-205ENST00000616288 SIN3AQ96ST3 1273 aa18.08■□□□□ 0.49
PPP4R3B-205ENST00000616288 TONSLQ96HA7 1378 aa18.07■□□□□ 0.48
PPP4R3B-205ENST00000616288 GSE1Q14687 1217 aa18.07■□□□□ 0.48
PPP4R3B-205ENST00000616288 PNNQ9H307 717 aaKnown RBP18.07■□□□□ 0.48
PPP4R3B-205ENST00000616288 USP35Q9P2H5 1018 aa18.03■□□□□ 0.48
PPP4R3B-205ENST00000616288 RSF1Q96T23 1441 aaPredicted RBP18.01■□□□□ 0.47
PPP4R3B-205ENST00000616288 TRIM44Q96DX7 344 aaPredicted RBP18.01■□□□□ 0.47
PPP4R3B-205ENST00000616288 PLEKHG5O94827 1062 aa17.98■□□□□ 0.47
PPP4R3B-205ENST00000616288 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
PPP4R3B-205ENST00000616288 ZNF326Q5BKZ1 582 aaKnown RBP17.97■□□□□ 0.47
PPP4R3B-205ENST00000616288 ARID3AQ99856 593 aa17.97■□□□□ 0.47
PPP4R3B-205ENST00000616288 TNIKQ9UKE5 1360 aa17.96■□□□□ 0.47
PPP4R3B-205ENST00000616288 SLC4A3P48751 1232 aa17.96■□□□□ 0.47
PPP4R3B-205ENST00000616288 ANP32BQ92688 251 aaKnown RBP17.96■□□□□ 0.47
PPP4R3B-205ENST00000616288 DHX57Q6P158 1386 aaKnown RBP17.95■□□□□ 0.46
PPP4R3B-205ENST00000616288 AMER1Q5JTC6 1135 aaPredicted RBP17.94■□□□□ 0.46
PPP4R3B-205ENST00000616288 ZMYND15Q9H091 742 aa17.94■□□□□ 0.46
PPP4R3B-205ENST00000616288 TMC1Q8TDI8 760 aa17.91■□□□□ 0.46
PPP4R3B-205ENST00000616288 CLIP1P30622 1438 aa17.9■□□□□ 0.46
PPP4R3B-205ENST00000616288 RB1CC1Q8TDY2 1594 aa17.9■□□□□ 0.46
PPP4R3B-205ENST00000616288 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
PPP4R3B-205ENST00000616288 SLC24A1O60721 1099 aa17.88■□□□□ 0.45
PPP4R3B-205ENST00000616288 FRAT1Q92837 279 aaPredicted RBP17.88■□□□□ 0.45
PPP4R3B-205ENST00000616288 L1TD1Q5T7N2 865 aaKnown RBP17.85■□□□□ 0.45
PPP4R3B-205ENST00000616288 TNNT2P45379 298 aaPredicted RBP17.85■□□□□ 0.45
PPP4R3B-205ENST00000616288 GZF1Q9H116 711 aaPredicted RBP17.84■□□□□ 0.45
PPP4R3B-205ENST00000616288 RGS3P49796 1198 aa17.83■□□□□ 0.44
PPP4R3B-205ENST00000616288 UPF2Q9HAU5 1272 aaKnown RBP17.82■□□□□ 0.44
PPP4R3B-205ENST00000616288 TCERG1O14776 1098 aaKnown RBP17.81■□□□□ 0.44
PPP4R3B-205ENST00000616288 PDE4AP27815 886 aa17.81■□□□□ 0.44
PPP4R3B-205ENST00000616288 NFKBIBQ15653 356 aa17.81■□□□□ 0.44
PPP4R3B-205ENST00000616288 BECN1Q14457 450 aa17.8■□□□□ 0.44
PPP4R3B-205ENST00000616288 EIF4G2P78344 907 aaKnown RBP eCLIP17.78■□□□□ 0.44
PPP4R3B-205ENST00000616288 SLKQ9H2G2 1235 aaPredicted RBP17.78■□□□□ 0.44
PPP4R3B-205ENST00000616288 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.44
PPP4R3B-205ENST00000616288 SOGA1O94964 1423 aa17.77■□□□□ 0.43
PPP4R3B-205ENST00000616288 PPP1R15AO75807 674 aaPredicted RBP17.76■□□□□ 0.43
PPP4R3B-205ENST00000616288 FAM43AQ8N2R8 423 aa17.75■□□□□ 0.43
PPP4R3B-205ENST00000616288 SPRYD3Q8NCJ5 442 aa17.73■□□□□ 0.43
PPP4R3B-205ENST00000616288 CDK11BP21127 795 aaKnown RBP17.71■□□□□ 0.43
PPP4R3B-205ENST00000616288 GOLGA3Q08378 1498 aa17.69■□□□□ 0.42
PPP4R3B-205ENST00000616288 P3H3Q8IVL6 736 aa17.69■□□□□ 0.42
PPP4R3B-205ENST00000616288 GOLGA6L3A6NEY3 463 aa17.68■□□□□ 0.42
PPP4R3B-205ENST00000616288 C11orf95C9JLR9 678 aaPredicted RBP17.65■□□□□ 0.42
PPP4R3B-205ENST00000616288 FRAT2O75474 233 aaPredicted RBP17.65■□□□□ 0.42
PPP4R3B-205ENST00000616288 WASHC2AQ641Q2 1341 aa17.65■□□□□ 0.42
PPP4R3B-205ENST00000616288 EEA1Q15075 1411 aa17.65■□□□□ 0.42
PPP4R3B-205ENST00000616288 NUDCQ9Y266 331 aa17.64■□□□□ 0.42
PPP4R3B-205ENST00000616288 KANK4Q5T7N3 995 aaPredicted RBP17.64■□□□□ 0.41
PPP4R3B-205ENST00000616288 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
PPP4R3B-205ENST00000616288 DNTTIP2Q5QJE6 756 aaKnown RBP17.62■□□□□ 0.41
PPP4R3B-205ENST00000616288 ZBTB7CA1YPR0 619 aa17.62■□□□□ 0.41
PPP4R3B-205ENST00000616288 RRP9O43818 475 aaKnown RBP17.61■□□□□ 0.41
PPP4R3B-205ENST00000616288 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
PPP4R3B-205ENST00000616288 MSNP26038 577 aaKnown RBP17.61■□□□□ 0.41
PPP4R3B-205ENST00000616288 EXOC6Q8TAG9 804 aa17.61■□□□□ 0.41
PPP4R3B-205ENST00000616288 NCLP19338 710 aaKnown RBP17.59■□□□□ 0.41
PPP4R3B-205ENST00000616288 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
PPP4R3B-205ENST00000616288 HSPA5P11021 654 aaKnown RBP17.58■□□□□ 0.41
PPP4R3B-205ENST00000616288 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.58■□□□□ 0.41
PPP4R3B-205ENST00000616288 FAM13BQ9NYF5 915 aa17.58■□□□□ 0.41
PPP4R3B-205ENST00000616288 RAB3GAP2Q9H2M9 1393 aa17.58■□□□□ 0.4
PPP4R3B-205ENST00000616288 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
PPP4R3B-205ENST00000616288 CCNB3Q8WWL7 1395 aa17.57■□□□□ 0.4
PPP4R3B-205ENST00000616288 ABCC9O60706 1549 aa17.57■□□□□ 0.4
PPP4R3B-205ENST00000616288 WASHC2CQ9Y4E1 1318 aa17.57■□□□□ 0.4
PPP4R3B-205ENST00000616288 ZBED9Q6R2W3 1325 aa17.55■□□□□ 0.4
PPP4R3B-205ENST00000616288 RCAN3Q9UKA8 241 aa17.55■□□□□ 0.4
PPP4R3B-205ENST00000616288 CHIC2Q9UKJ5 165 aa17.53■□□□□ 0.4
PPP4R3B-205ENST00000616288 CCDC184Q52MB2 194 aa17.52■□□□□ 0.4
PPP4R3B-205ENST00000616288 PDE4CQ08493 712 aa17.52■□□□□ 0.39
PPP4R3B-205ENST00000616288 SCRIBQ14160 1630 aa17.51■□□□□ 0.39
PPP4R3B-205ENST00000616288 PTMAP06454 111 aaKnown RBP17.5■□□□□ 0.39
PPP4R3B-205ENST00000616288 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
PPP4R3B-205ENST00000616288 RBM10P98175 930 aaKnown RBP17.5■□□□□ 0.39
PPP4R3B-205ENST00000616288 PLIN1O60240 522 aa17.47■□□□□ 0.39
PPP4R3B-205ENST00000616288 MS4A1P11836 297 aa17.47■□□□□ 0.39
PPP4R3B-205ENST00000616288 AKNAQ7Z591 1439 aa17.46■□□□□ 0.39
PPP4R3B-205ENST00000616288 BACH2Q9BYV9 841 aa17.46■□□□□ 0.39
PPP4R3B-205ENST00000616288 PRKRIP1Q9H875 184 aaPredicted RBP17.46■□□□□ 0.39
PPP4R3B-205ENST00000616288 GOLGA6L22H0YM25 854 aa17.44■□□□□ 0.38
PPP4R3B-205ENST00000616288 SLC4A1APQ9BWU0 796 aaKnown RBP17.44■□□□□ 0.38
PPP4R3B-205ENST00000616288 SETD5Q9C0A6 1442 aa17.43■□□□□ 0.38
PPP4R3B-205ENST00000616288 POGKQ9P215 609 aa17.43■□□□□ 0.38
PPP4R3B-205ENST00000616288 RRP1P56182 461 aaKnown RBP17.41■□□□□ 0.38
PPP4R3B-205ENST00000616288 CEP164Q9UPV0 1460 aa17.41■□□□□ 0.38
PPP4R3B-205ENST00000616288 WDR97A6NE52 1622 aa17.41■□□□□ 0.38
PPP4R3B-205ENST00000616288 RRP7BPQ9NSQ0 103 aa17.4■□□□□ 0.38
PPP4R3B-205ENST00000616288 FAM161AQ3B820 660 aa17.4■□□□□ 0.38
PPP4R3B-205ENST00000616288 DCAF11Q8TEB1 546 aa17.39■□□□□ 0.37
PPP4R3B-205ENST00000616288 SKAP1Q86WV1 359 aa17.38■□□□□ 0.37
PPP4R3B-205ENST00000616288 RRAGDQ9NQL2 400 aaPredicted RBP17.37■□□□□ 0.37
PPP4R3B-205ENST00000616288 NACADO15069 1562 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms