RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 HRCP23327 699 aa10.65□□□□□ -0.7
CDKAL1-204ENST00000613575 PRR29P0C7W0 189 aa10.6□□□□□ -0.71
CDKAL1-204ENST00000613575 MIER1Q8N108 512 aa10.6□□□□□ -0.71
CDKAL1-204ENST00000613575 PLCD3Q8N3E9 789 aa10.6□□□□□ -0.71
CDKAL1-204ENST00000613575 PRKAR2AP13861 404 aaKnown RBP10.58□□□□□ -0.72
CDKAL1-204ENST00000613575 RB1CC1Q8TDY2 1594 aa10.58□□□□□ -0.72
CDKAL1-204ENST00000613575 CECR2Q9BXF3 1484 aa10.57□□□□□ -0.72
CDKAL1-204ENST00000613575 BCL11AQ9H165 835 aa10.57□□□□□ -0.72
CDKAL1-204ENST00000613575 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
CDKAL1-204ENST00000613575 KLHL34Q8N239 644 aa10.53□□□□□ -0.72
CDKAL1-204ENST00000613575 MROH2BQ7Z745 1585 aa10.52□□□□□ -0.72
CDKAL1-204ENST00000613575 IFNLR1Q8IU57 520 aaPredicted RBP10.52□□□□□ -0.73
CDKAL1-204ENST00000613575 DAXXQ9UER7 740 aaPredicted RBP10.52□□□□□ -0.73
CDKAL1-204ENST00000613575 POTEIP0CG38 1075 aa10.51□□□□□ -0.73
CDKAL1-204ENST00000613575 LOC105371045A0A1W2PR82 267 aa10.49□□□□□ -0.73
CDKAL1-204ENST00000613575 TRIM41Q8WV44 630 aa10.47□□□□□ -0.73
CDKAL1-204ENST00000613575 BAZ1AQ9NRL2 1556 aaPredicted RBP10.45□□□□□ -0.74
CDKAL1-204ENST00000613575 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
CDKAL1-204ENST00000613575 CREBZFQ9NS37 354 aa10.44□□□□□ -0.74
CDKAL1-204ENST00000613575 ZBTB47Q9UFB7 747 aaPredicted RBP10.44□□□□□ -0.74
CDKAL1-204ENST00000613575 SPOCK2Q92563 424 aa10.4□□□□□ -0.74
CDKAL1-204ENST00000613575 RTN4Q9NQC3 1192 aaKnown RBP10.4□□□□□ -0.74
CDKAL1-204ENST00000613575 CHADLQ6NUI6 762 aa10.39□□□□□ -0.75
CDKAL1-204ENST00000613575 WIZO95785 1651 aa10.38□□□□□ -0.75
CDKAL1-204ENST00000613575 FAM9AQ8IZU1 332 aaPredicted RBP10.35□□□□□ -0.75
CDKAL1-204ENST00000613575 PCGF6Q9BYE7 350 aa10.35□□□□□ -0.75
CDKAL1-204ENST00000613575 CENPBP07199 599 aaPredicted RBP10.33□□□□□ -0.76
CDKAL1-204ENST00000613575 TOP2AP11388 1531 aaKnown RBP10.32□□□□□ -0.76
CDKAL1-204ENST00000613575 SMARCA4P51532 1647 aa10.32□□□□□ -0.76
CDKAL1-204ENST00000613575 NPM1P06748 294 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDKAL1-204ENST00000613575 TRIM26Q12899 539 aaPredicted RBP10.31□□□□□ -0.76
CDKAL1-204ENST00000613575 MNX1P50219 401 aaPredicted RBP10.3□□□□□ -0.76
CDKAL1-204ENST00000613575 CCDC88BA6NC98 1476 aa10.29□□□□□ -0.76
CDKAL1-204ENST00000613575 BICRAQ9NZM4 1560 aa10.28□□□□□ -0.76
CDKAL1-204ENST00000613575 FARP1Q9Y4F1 1045 aaPredicted RBP10.28□□□□□ -0.76
CDKAL1-204ENST00000613575 EIF4G1Q04637 1599 aaKnown RBP10.27□□□□□ -0.77
CDKAL1-204ENST00000613575 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.77
CDKAL1-204ENST00000613575 UNC13AQ9UPW8 1703 aa10.26□□□□□ -0.77
CDKAL1-204ENST00000613575 POTEMA6NI47 508 aa10.25□□□□□ -0.77
CDKAL1-204ENST00000613575 NUBP1P53384 320 aa10.25□□□□□ -0.77
CDKAL1-204ENST00000613575 PEG3Q9GZU2 1588 aa10.24□□□□□ -0.77
CDKAL1-204ENST00000613575 SMARCA2P51531 1590 aa10.24□□□□□ -0.77
CDKAL1-204ENST00000613575 DCAF8Q5TAQ9 597 aa10.23□□□□□ -0.77
CDKAL1-204ENST00000613575 OTUD5Q96G74 571 aa10.23□□□□□ -0.77
CDKAL1-204ENST00000613575 GSE1Q14687 1217 aa10.2□□□□□ -0.78
CDKAL1-204ENST00000613575 FAM212AQ96EL1 285 aa10.2□□□□□ -0.78
CDKAL1-204ENST00000613575 CD44P16070 742 aaKnown RBP10.19□□□□□ -0.78
CDKAL1-204ENST00000613575 CLCN6P51797 869 aa10.19□□□□□ -0.78
CDKAL1-204ENST00000613575 PKD2Q13563 968 aa10.19□□□□□ -0.78
CDKAL1-204ENST00000613575 POTEGQ6S5H5 508 aa10.19□□□□□ -0.78
CDKAL1-204ENST00000613575 RASEFQ8IZ41 740 aa10.19□□□□□ -0.78
CDKAL1-204ENST00000613575 EIF5BO60841 1220 aaKnown RBP10.18□□□□□ -0.78
CDKAL1-204ENST00000613575 ECM2O94769 699 aaPredicted RBP10.17□□□□□ -0.78
CDKAL1-204ENST00000613575 TSPYL2Q9H2G4 693 aaPredicted RBP10.16□□□□□ -0.78
CDKAL1-204ENST00000613575 ATAD2BQ9ULI0 1458 aa10.16□□□□□ -0.78
CDKAL1-204ENST00000613575 ILDR1Q86SU0 546 aaPredicted RBP10.15□□□□□ -0.79
CDKAL1-204ENST00000613575 DCBLD2Q96PD2 775 aa10.15□□□□□ -0.79
CDKAL1-204ENST00000613575 EEA1Q15075 1411 aa10.14□□□□□ -0.79
CDKAL1-204ENST00000613575 POTEB2H3BUK9 544 aa10.14□□□□□ -0.79
CDKAL1-204ENST00000613575 PAK3O75914 559 aaPredicted RBP10.12□□□□□ -0.79
CDKAL1-204ENST00000613575 ZEB1P37275 1124 aaPredicted RBP10.1□□□□□ -0.79
CDKAL1-204ENST00000613575 PCDH10Q9P2E7 1040 aa10.1□□□□□ -0.79
CDKAL1-204ENST00000613575 ABCC8Q09428 1581 aa10.09□□□□□ -0.79
CDKAL1-204ENST00000613575 TNIKQ9UKE5 1360 aa10.09□□□□□ -0.79
CDKAL1-204ENST00000613575 PPARGC1BQ86YN6 1023 aaKnown RBP10.09□□□□□ -0.79
CDKAL1-204ENST00000613575 SOGA1O94964 1423 aa10.07□□□□□ -0.8
CDKAL1-204ENST00000613575 WRNQ14191 1432 aaPredicted RBP eCLIP10.07□□□□□ -0.8
CDKAL1-204ENST00000613575 PYGBP11216 843 aa10.06□□□□□ -0.8
CDKAL1-204ENST00000613575 BAZ1BQ9UIG0 1483 aaKnown RBP10.05□□□□□ -0.8
CDKAL1-204ENST00000613575 ACIN1Q9UKV3 1341 aaKnown RBP10.05□□□□□ -0.8
CDKAL1-204ENST00000613575 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
CDKAL1-204ENST00000613575 NCAPD3P42695 1498 aa10.05□□□□□ -0.8
CDKAL1-204ENST00000613575 ZNF579Q8NAF0 562 aaKnown RBP10.04□□□□□ -0.8
CDKAL1-204ENST00000613575 ANP32EQ9BTT0 268 aa10.04□□□□□ -0.8
CDKAL1-204ENST00000613575 RGL2O15211 777 aa10.03□□□□□ -0.8
CDKAL1-204ENST00000613575 CCDC61Q9Y6R9 512 aa10.01□□□□□ -0.81
CDKAL1-204ENST00000613575 RUSC2Q8N2Y8 1516 aa10□□□□□ -0.81
CDKAL1-204ENST00000613575 CHRM1P11229 460 aaPredicted RBP10□□□□□ -0.81
CDKAL1-204ENST00000613575 CUX2O14529 1486 aa9.98□□□□□ -0.81
CDKAL1-204ENST00000613575 CEP162Q5TB80 1403 aa9.98□□□□□ -0.81
CDKAL1-204ENST00000613575 GALR2O43603 387 aaPredicted RBP9.97□□□□□ -0.81
CDKAL1-204ENST00000613575 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.81
CDKAL1-204ENST00000613575 GOLGA3Q08378 1498 aa9.96□□□□□ -0.81
CDKAL1-204ENST00000613575 HMGXB3Q12766 1538 aa9.96□□□□□ -0.82
CDKAL1-204ENST00000613575 RIOK3O14730 519 aaKnown RBP9.95□□□□□ -0.82
CDKAL1-204ENST00000613575 UBTFP17480 764 aaKnown RBP9.95□□□□□ -0.82
CDKAL1-204ENST00000613575 RNF25Q96BH1 459 aaPredicted RBP9.95□□□□□ -0.82
CDKAL1-204ENST00000613575 PHF12Q96QT6 1004 aa9.95□□□□□ -0.82
CDKAL1-204ENST00000613575 SYNJ1O43426 1573 aa9.94□□□□□ -0.82
CDKAL1-204ENST00000613575 CEP164Q9UPV0 1460 aa9.94□□□□□ -0.82
CDKAL1-204ENST00000613575 UBE2Q2Q8WVN8 375 aa9.93□□□□□ -0.82
CDKAL1-204ENST00000613575 TAOK2Q9UL54 1235 aa9.93□□□□□ -0.82
CDKAL1-204ENST00000613575 PCDHB13Q9Y5F0 798 aa9.93□□□□□ -0.82
CDKAL1-204ENST00000613575 KIF12Q96FN5 646 aa9.92□□□□□ -0.82
CDKAL1-204ENST00000613575 GTF3C3Q9Y5Q9 886 aa9.92□□□□□ -0.82
CDKAL1-204ENST00000613575 MAP3K13O43283 966 aa9.91□□□□□ -0.82
CDKAL1-204ENST00000613575 ZNF467Q7Z7K2 595 aaPredicted RBP9.9□□□□□ -0.82
CDKAL1-204ENST00000613575 KIF21BO75037 1637 aa9.9□□□□□ -0.83
CDKAL1-204ENST00000613575 CFTRP13569 1480 aa9.9□□□□□ -0.83
CDKAL1-204ENST00000613575 PCDHB8Q9UN66 801 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms