RNA–Protein interactions for RNA: ENST00000613405.4

TRAK1-210, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2 BASIC

Gene TRAK1, Length 4,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-210ENST00000613405 TSPY10P0CW01 314 aa17.87■□□□□ 0.45
TRAK1-210ENST00000613405 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
TRAK1-210ENST00000613405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.452e-7■■□□□ 13.9
TRAK1-210ENST00000613405 TMC1Q8TDI8 760 aa17.84■□□□□ 0.45
TRAK1-210ENST00000613405 CCDC88BA6NC98 1476 aa17.83■□□□□ 0.44
TRAK1-210ENST00000613405 CHGAP10645 457 aaKnown RBP17.81■□□□□ 0.44
TRAK1-210ENST00000613405 KDM2AQ9Y2K7 1162 aa17.81■□□□□ 0.44
TRAK1-210ENST00000613405 ABCC8Q09428 1581 aa17.78■□□□□ 0.44
TRAK1-210ENST00000613405 UPF2Q9HAU5 1272 aaKnown RBP17.75■□□□□ 0.43
TRAK1-210ENST00000613405 EIF4G2P78344 907 aaKnown RBP eCLIP17.75■□□□□ 0.43
TRAK1-210ENST00000613405 GLIPR1L2Q4G1C9 344 aa17.75■□□□□ 0.43
TRAK1-210ENST00000613405 NPM1P06748 294 aaKnown RBP eCLIP17.74■□□□□ 0.43
TRAK1-210ENST00000613405 SIN3AQ96ST3 1273 aa17.72■□□□□ 0.43
TRAK1-210ENST00000613405 ANP32BQ92688 251 aaKnown RBP17.72■□□□□ 0.43
TRAK1-210ENST00000613405 PLEKHD1A6NEE1 506 aa17.71■□□□□ 0.43
TRAK1-210ENST00000613405 CARMIL1Q5VZK9 1371 aa17.71■□□□□ 0.43
TRAK1-210ENST00000613405 HSP90AA1P07900 732 aaKnown RBP17.7■□□□□ 0.42
TRAK1-210ENST00000613405 CUX2O14529 1486 aa17.7■□□□□ 0.42
TRAK1-210ENST00000613405 ARXQ96QS3 562 aa17.69■□□□□ 0.42
TRAK1-210ENST00000613405 NEFMP07197 916 aa17.68■□□□□ 0.42
TRAK1-210ENST00000613405 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
TRAK1-210ENST00000613405 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
TRAK1-210ENST00000613405 CFDP1Q9UEE9 299 aaPredicted RBP17.67■□□□□ 0.42
TRAK1-210ENST00000613405 WIZO95785 1651 aa17.66■□□□□ 0.42
TRAK1-210ENST00000613405 VPS8Q8N3P4 1428 aa17.65■□□□□ 0.42
TRAK1-210ENST00000613405 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.65■□□□□ 0.42
TRAK1-210ENST00000613405 KANK4Q5T7N3 995 aaPredicted RBP17.65■□□□□ 0.42
TRAK1-210ENST00000613405 PPP4R2Q9NY27 417 aa17.63■□□□□ 0.41
TRAK1-210ENST00000613405 STAG3Q9UJ98 1225 aa17.62■□□□□ 0.41
TRAK1-210ENST00000613405 RBM19Q9Y4C8 960 aaKnown RBP17.62■□□□□ 0.41
TRAK1-210ENST00000613405 RGL3Q3MIN7 710 aa17.61■□□□□ 0.41
TRAK1-210ENST00000613405 SLC24A1O60721 1099 aa17.61■□□□□ 0.41
TRAK1-210ENST00000613405 ESF1Q9H501 851 aaKnown RBP17.6■□□□□ 0.41
TRAK1-210ENST00000613405 SENP3-EIF4A1A0A087X0R7 540 aa17.6■□□□□ 0.41
TRAK1-210ENST00000613405 FHAD1B1AJZ9 1412 aa17.6■□□□□ 0.41
TRAK1-210ENST00000613405 DDRGK1Q96HY6 314 aa17.58■□□□□ 0.4
TRAK1-210ENST00000613405 NOP58Q9Y2X3 529 aaKnown RBP17.57■□□□□ 0.4
TRAK1-210ENST00000613405 WDR43Q15061 677 aaKnown RBP eCLIP17.57■□□□□ 0.4
TRAK1-210ENST00000613405 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
TRAK1-210ENST00000613405 RTN4Q9NQC3 1192 aaKnown RBP17.54■□□□□ 0.4
TRAK1-210ENST00000613405 TSHZ2Q9NRE2 1034 aa17.54■□□□□ 0.4
TRAK1-210ENST00000613405 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
TRAK1-210ENST00000613405 B4GALNT3Q6L9W6 998 aa17.54■□□□□ 0.4
TRAK1-210ENST00000613405 PPM1GO15355 546 aaPredicted RBP17.53■□□□□ 0.4
TRAK1-210ENST00000613405 LAS1LQ9Y4W2 734 aaKnown RBP17.51■□□□□ 0.39
TRAK1-210ENST00000613405 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
TRAK1-210ENST00000613405 DEKP35659 375 aaKnown RBP17.49■□□□□ 0.39
TRAK1-210ENST00000613405 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
TRAK1-210ENST00000613405 CARD11Q9BXL7 1154 aa17.47■□□□□ 0.39
TRAK1-210ENST00000613405 SENP3Q9H4L4 574 aaPredicted RBP17.47■□□□□ 0.39
TRAK1-210ENST00000613405 BECN1Q14457 450 aa17.46■□□□□ 0.39
TRAK1-210ENST00000613405 RUSC2Q8N2Y8 1516 aa17.45■□□□□ 0.38
TRAK1-210ENST00000613405 CCER2I3L3R5 266 aa17.45■□□□□ 0.38
TRAK1-210ENST00000613405 ATAD2BQ9ULI0 1458 aa17.44■□□□□ 0.38
TRAK1-210ENST00000613405 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
TRAK1-210ENST00000613405 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
TRAK1-210ENST00000613405 SETD5Q9C0A6 1442 aa17.43■□□□□ 0.38
TRAK1-210ENST00000613405 RAPGEF2Q9Y4G8 1499 aa17.42■□□□□ 0.38
TRAK1-210ENST00000613405 ERICH6BQ5W0A0 696 aa17.42■□□□□ 0.38
TRAK1-210ENST00000613405 TIMELESSQ9UNS1 1208 aa17.42■□□□□ 0.38
TRAK1-210ENST00000613405 RAB3GAP2Q9H2M9 1393 aa17.39■□□□□ 0.37
TRAK1-210ENST00000613405 CADPSQ9ULU8 1353 aa17.38■□□□□ 0.37
TRAK1-210ENST00000613405 TRIM44Q96DX7 344 aaPredicted RBP17.38■□□□□ 0.37
TRAK1-210ENST00000613405 SMARCA4P51532 1647 aa17.38■□□□□ 0.37
TRAK1-210ENST00000613405 ARHGAP35Q9NRY4 1499 aa17.37■□□□□ 0.37
TRAK1-210ENST00000613405 FOXD1Q16676 465 aa17.35■□□□□ 0.37
TRAK1-210ENST00000613405 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.36
TRAK1-210ENST00000613405 RGS3P49796 1198 aa17.32■□□□□ 0.36
TRAK1-210ENST00000613405 DCAF11Q8TEB1 546 aa17.32■□□□□ 0.36
TRAK1-210ENST00000613405 KNSTRNQ9Y448 316 aa17.32■□□□□ 0.36
TRAK1-210ENST00000613405 FMN1Q68DA7 1419 aa17.31■□□□□ 0.36
TRAK1-210ENST00000613405 FHOD3Q2V2M9 1422 aa17.29■□□□□ 0.36
TRAK1-210ENST00000613405 HSPA5P11021 654 aaKnown RBP17.28■□□□□ 0.36
TRAK1-210ENST00000613405 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
TRAK1-210ENST00000613405 NAP1L5Q96NT1 182 aaPredicted RBP17.27■□□□□ 0.35
TRAK1-210ENST00000613405 PKD2Q13563 968 aa17.26■□□□□ 0.35
TRAK1-210ENST00000613405 GOLGA6L22H0YM25 854 aa17.25■□□□□ 0.35
TRAK1-210ENST00000613405 PPP1R15AO75807 674 aaPredicted RBP17.25■□□□□ 0.35
TRAK1-210ENST00000613405 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
TRAK1-210ENST00000613405 MYH16Q9H6N6 1097 aa17.22■□□□□ 0.35
TRAK1-210ENST00000613405 CC2D1BQ5T0F9 858 aaKnown RBP17.21■□□□□ 0.35
TRAK1-210ENST00000613405 NCLP19338 710 aaKnown RBP17.2■□□□□ 0.34
TRAK1-210ENST00000613405 NEUROD2Q15784 382 aa17.19■□□□□ 0.34
TRAK1-210ENST00000613405 CARMIL2Q6F5E8 1435 aa17.17■□□□□ 0.34
TRAK1-210ENST00000613405 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
TRAK1-210ENST00000613405 CFAP53Q96M91 514 aa17.17■□□□□ 0.34
TRAK1-210ENST00000613405 L3MBTL2Q969R5 705 aa17.16■□□□□ 0.34
TRAK1-210ENST00000613405 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
TRAK1-210ENST00000613405 TMF1P82094 1093 aa17.15■□□□□ 0.34
TRAK1-210ENST00000613405 FRAT1Q92837 279 aaPredicted RBP17.14■□□□□ 0.33
TRAK1-210ENST00000613405 NUP155O75694 1391 aa17.14■□□□□ 0.33
TRAK1-210ENST00000613405 FTSJ3Q8IY81 847 aaKnown RBP17.13■□□□□ 0.33
TRAK1-210ENST00000613405 IPO9Q96P70 1041 aaKnown RBP17.13■□□□□ 0.33
TRAK1-210ENST00000613405 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
TRAK1-210ENST00000613405 PTMAP06454 111 aaKnown RBP17.12■□□□□ 0.33
TRAK1-210ENST00000613405 IGF1RP08069 1367 aa17.11■□□□□ 0.33
TRAK1-210ENST00000613405 TCERG1O14776 1098 aaKnown RBP17.1■□□□□ 0.33
TRAK1-210ENST00000613405 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
TRAK1-210ENST00000613405 JPH4Q96JJ6 628 aa17.09■□□□□ 0.33
TRAK1-210ENST00000613405 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms