RNA–Protein interactions for RNA: ENST00000613258.4

NUP153-203, Transcript of nucleoporin 153, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUP153, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP153-203ENST00000613258 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
NUP153-203ENST00000613258 HIRIP3Q9BW71 556 aaPredicted RBP19.22■□□□□ 0.67
NUP153-203ENST00000613258 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
NUP153-203ENST00000613258 FAM9BQ8IZU0 186 aa19.2■□□□□ 0.66
NUP153-203ENST00000613258 TNIKQ9UKE5 1360 aa19.2■□□□□ 0.66
NUP153-203ENST00000613258 SOGA1O94964 1423 aa19.2■□□□□ 0.66
NUP153-203ENST00000613258 SALL2Q9Y467 1007 aaPredicted RBP19.2■□□□□ 0.66
NUP153-203ENST00000613258 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
NUP153-203ENST00000613258 WIZO95785 1651 aa19.18■□□□□ 0.66
NUP153-203ENST00000613258 PLEKHG5O94827 1062 aa19.17■□□□□ 0.66
NUP153-203ENST00000613258 PPP1R15AO75807 674 aaPredicted RBP19.17■□□□□ 0.66
NUP153-203ENST00000613258 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
NUP153-203ENST00000613258 RGL3Q3MIN7 710 aa19.15■□□□□ 0.66
NUP153-203ENST00000613258 RTL5Q5HYW3 569 aaPredicted RBP19.13■□□□□ 0.65
NUP153-203ENST00000613258 HNRNPUQ00839 825 aaKnown RBP eCLIP19.11■□□□□ 0.65
NUP153-203ENST00000613258 PDS5BQ9NTI5 1447 aa19.1■□□□□ 0.65
NUP153-203ENST00000613258 ZBTB7CA1YPR0 619 aa19.1■□□□□ 0.65
NUP153-203ENST00000613258 TMC1Q8TDI8 760 aa19.06■□□□□ 0.64
NUP153-203ENST00000613258 C14orf37Q86TY3 774 aa19.05■□□□□ 0.64
NUP153-203ENST00000613258 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
NUP153-203ENST00000613258 TRHP20396 242 aaPredicted RBP19.05■□□□□ 0.64
NUP153-203ENST00000613258 TDRD9Q8NDG6 1382 aaKnown RBP19.04■□□□□ 0.64
NUP153-203ENST00000613258 CCNB3Q8WWL7 1395 aa19.03■□□□□ 0.64
NUP153-203ENST00000613258 WDR43Q15061 677 aaKnown RBP eCLIP19.03■□□□□ 0.64
NUP153-203ENST00000613258 EIF4G2P78344 907 aaKnown RBP eCLIP19■□□□□ 0.631e-7■□□□□ 8.4
NUP153-203ENST00000613258 ACIN1Q9UKV3 1341 aaKnown RBP19■□□□□ 0.63
NUP153-203ENST00000613258 MRS2Q9HD23 443 aa18.98■□□□□ 0.63
NUP153-203ENST00000613258 FHAD1B1AJZ9 1412 aa18.98■□□□□ 0.63
NUP153-203ENST00000613258 A0A0G2JS52 829 aa18.98■□□□□ 0.63
NUP153-203ENST00000613258 FKBP8Q14318 412 aa18.96■□□□□ 0.63
NUP153-203ENST00000613258 MLECQ14165 292 aa18.94■□□□□ 0.62
NUP153-203ENST00000613258 SMARCA4P51532 1647 aa18.94■□□□□ 0.62
NUP153-203ENST00000613258 NPM2Q86SE8 214 aaKnown RBP18.93■□□□□ 0.62
NUP153-203ENST00000613258 ATAD2BQ9ULI0 1458 aa18.91■□□□□ 0.62
NUP153-203ENST00000613258 CADPSQ9ULU8 1353 aa18.91■□□□□ 0.62
NUP153-203ENST00000613258 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
NUP153-203ENST00000613258 CARD11Q9BXL7 1154 aa18.88■□□□□ 0.61
NUP153-203ENST00000613258 CARMIL2Q6F5E8 1435 aa18.87■□□□□ 0.61
NUP153-203ENST00000613258 SENP3-EIF4A1A0A087X0R7 540 aa18.87■□□□□ 0.61
NUP153-203ENST00000613258 MIER1Q8N108 512 aa18.86■□□□□ 0.61
NUP153-203ENST00000613258 HAP1P54257 671 aaPredicted RBP18.82■□□□□ 0.6
NUP153-203ENST00000613258 ARHGAP35Q9NRY4 1499 aa18.82■□□□□ 0.6
NUP153-203ENST00000613258 PPM1GO15355 546 aaPredicted RBP18.81■□□□□ 0.6
NUP153-203ENST00000613258 KANK4Q5T7N3 995 aaPredicted RBP18.81■□□□□ 0.6
NUP153-203ENST00000613258 POGKQ9P215 609 aa18.8■□□□□ 0.6
NUP153-203ENST00000613258 KANK1Q14678 1352 aa18.79■□□□□ 0.6
NUP153-203ENST00000613258 ANP32AP39687 249 aaKnown RBP18.78■□□□□ 0.6
NUP153-203ENST00000613258 IRX6P78412 446 aaPredicted RBP18.78■□□□□ 0.6
NUP153-203ENST00000613258 VPS8Q8N3P4 1428 aa18.77■□□□□ 0.6
NUP153-203ENST00000613258 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.59
NUP153-203ENST00000613258 GGT6Q6P531 493 aa18.76■□□□□ 0.59
NUP153-203ENST00000613258 KNSTRNQ9Y448 316 aa18.76■□□□□ 0.59
NUP153-203ENST00000613258 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.75■□□□□ 0.59
NUP153-203ENST00000613258 LMOD2Q6P5Q4 547 aa18.75■□□□□ 0.59
NUP153-203ENST00000613258 DCAF11Q8TEB1 546 aa18.74■□□□□ 0.59
NUP153-203ENST00000613258 FHOD3Q2V2M9 1422 aa18.73■□□□□ 0.59
NUP153-203ENST00000613258 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
NUP153-203ENST00000613258 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
NUP153-203ENST00000613258 FOXD1Q16676 465 aa18.72■□□□□ 0.59
NUP153-203ENST00000613258 TNNT2P45379 298 aaPredicted RBP18.71■□□□□ 0.59
NUP153-203ENST00000613258 CCDC136Q96JN2 1154 aa18.71■□□□□ 0.59
NUP153-203ENST00000613258 FMN1Q68DA7 1419 aa18.71■□□□□ 0.58
NUP153-203ENST00000613258 CFAP53Q96M91 514 aa18.69■□□□□ 0.58
NUP153-203ENST00000613258 SAFB2Q14151 953 aaKnown RBP eCLIP18.67■□□□□ 0.58
NUP153-203ENST00000613258 CC2D1BQ5T0F9 858 aaKnown RBP18.67■□□□□ 0.58
NUP153-203ENST00000613258 HSP90AA1P07900 732 aaKnown RBP18.66■□□□□ 0.58
NUP153-203ENST00000613258 SETD5Q9C0A6 1442 aa18.65■□□□□ 0.58
NUP153-203ENST00000613258 PKD2Q13563 968 aa18.64■□□□□ 0.57
NUP153-203ENST00000613258 NEUROD2Q15784 382 aa18.64■□□□□ 0.57
NUP153-203ENST00000613258 UPF2Q9HAU5 1272 aaKnown RBP18.64■□□□□ 0.57
NUP153-203ENST00000613258 HNRNPMP52272 730 aaKnown RBP eCLIP18.63■□□□□ 0.572e-6■■■■□ 24.8
NUP153-203ENST00000613258 JPH4Q96JJ6 628 aa18.62■□□□□ 0.57
NUP153-203ENST00000613258 RUSC2Q8N2Y8 1516 aa18.62■□□□□ 0.57
NUP153-203ENST00000613258 EFCAB2Q5VUJ9 269 aa18.62■□□□□ 0.57
NUP153-203ENST00000613258 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
NUP153-203ENST00000613258 ARXQ96QS3 562 aa18.61■□□□□ 0.57
NUP153-203ENST00000613258 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
NUP153-203ENST00000613258 STK26Q9P289 416 aa18.6■□□□□ 0.57
NUP153-203ENST00000613258 SOX12O15370 315 aa18.58■□□□□ 0.57
NUP153-203ENST00000613258 SRPK2P78362 688 aaKnown RBP18.58■□□□□ 0.56
NUP153-203ENST00000613258 HDGFP51858 240 aaKnown RBP18.56■□□□□ 0.56
NUP153-203ENST00000613258 TMF1P82094 1093 aa18.56■□□□□ 0.56
NUP153-203ENST00000613258 MAPK8IP3Q9UPT6 1336 aa18.55■□□□□ 0.56
NUP153-203ENST00000613258 NUP155O75694 1391 aa18.55■□□□□ 0.56
NUP153-203ENST00000613258 RAD54L2Q9Y4B4 1467 aa18.54■□□□□ 0.56
NUP153-203ENST00000613258 ANKRD30AQ9BXX3 1397 aa18.54■□□□□ 0.56
NUP153-203ENST00000613258 FGD5Q6ZNL6 1462 aa18.54■□□□□ 0.56
NUP153-203ENST00000613258 KIF3BO15066 747 aa18.53■□□□□ 0.56
NUP153-203ENST00000613258 U2SURPO15042 1029 aaKnown RBP18.53■□□□□ 0.56
NUP153-203ENST00000613258 RAB3GAP2Q9H2M9 1393 aa18.52■□□□□ 0.56
NUP153-203ENST00000613258 MPHOSPH9Q99550 1183 aa18.52■□□□□ 0.56
NUP153-203ENST00000613258 NUDCQ9Y266 331 aa18.51■□□□□ 0.55
NUP153-203ENST00000613258 CCDC18Q5T9S5 1454 aa18.5■□□□□ 0.55
NUP153-203ENST00000613258 NUTM2DQ5VT03 806 aaPredicted RBP18.5■□□□□ 0.55
NUP153-203ENST00000613258 CYB5RLQ6IPT4 315 aa18.49■□□□□ 0.55
NUP153-203ENST00000613258 HSPA5P11021 654 aaKnown RBP18.48■□□□□ 0.55
NUP153-203ENST00000613258 SPAG9O60271 1321 aaKnown RBP18.48■□□□□ 0.55
NUP153-203ENST00000613258 GAPVD1Q14C86 1478 aa18.47■□□□□ 0.55
NUP153-203ENST00000613258 ROCK2O75116 1388 aaKnown RBP18.45■□□□□ 0.54
NUP153-203ENST00000613258 PTPRGP23470 1445 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms