RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 FAM50AQ14320 339 aaKnown RBP14.48□□□□□ -0.09
CNTNAP3B-211ENST00000612828 PTMAP06454 111 aaKnown RBP14.48□□□□□ -0.09
CNTNAP3B-211ENST00000612828 SALL2Q9Y467 1007 aaPredicted RBP14.47□□□□□ -0.09
CNTNAP3B-211ENST00000612828 PATL2C9JE40 543 aaKnown RBP14.46□□□□□ -0.09
CNTNAP3B-211ENST00000612828 NAP1L2Q9ULW6 460 aaPredicted RBP14.46□□□□□ -0.1
CNTNAP3B-211ENST00000612828 VSIG10Q8N0Z9 540 aa14.45□□□□□ -0.1
CNTNAP3B-211ENST00000612828 A0A0U1RQG5 324 aaPredicted RBP14.44□□□□□ -0.1
CNTNAP3B-211ENST00000612828 CHGAP10645 457 aaKnown RBP14.43□□□□□ -0.1
CNTNAP3B-211ENST00000612828 WDR70Q9NW82 654 aa14.4□□□□□ -0.1
CNTNAP3B-211ENST00000612828 DCAF1Q9Y4B6 1507 aa14.38□□□□□ -0.11
CNTNAP3B-211ENST00000612828 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
CNTNAP3B-211ENST00000612828 GOLGA2Q08379 1002 aa14.38□□□□□ -0.11
CNTNAP3B-211ENST00000612828 ABCC9O60706 1549 aa14.37□□□□□ -0.11
CNTNAP3B-211ENST00000612828 ARID3AQ99856 593 aa14.37□□□□□ -0.11
CNTNAP3B-211ENST00000612828 TAF7LQ5H9L4 462 aa14.34□□□□□ -0.11
CNTNAP3B-211ENST00000612828 CCDC136Q96JN2 1154 aa14.34□□□□□ -0.11
CNTNAP3B-211ENST00000612828 ARID4BQ4LE39 1312 aaPredicted RBP14.34□□□□□ -0.11
CNTNAP3B-211ENST00000612828 PNNQ9H307 717 aaKnown RBP14.32□□□□□ -0.12
CNTNAP3B-211ENST00000612828 MIER1Q8N108 512 aa14.29□□□□□ -0.12
CNTNAP3B-211ENST00000612828 FBLN2P98095 1184 aa14.29□□□□□ -0.12
CNTNAP3B-211ENST00000612828 P3H3Q8IVL6 736 aa14.28□□□□□ -0.12
CNTNAP3B-211ENST00000612828 KIAA2012Q0VF49 1180 aa14.27□□□□□ -0.13
CNTNAP3B-211ENST00000612828 RRP12Q5JTH9 1297 aaKnown RBP14.26□□□□□ -0.13
CNTNAP3B-211ENST00000612828 ANP32CO43423 234 aa14.26□□□□□ -0.13
CNTNAP3B-211ENST00000612828 NAP1L5Q96NT1 182 aaPredicted RBP14.23□□□□□ -0.13
CNTNAP3B-211ENST00000612828 MYH16Q9H6N6 1097 aa14.21□□□□□ -0.13
CNTNAP3B-211ENST00000612828 ZCCHC6Q5VYS8 1495 aaKnown RBP14.21□□□□□ -0.13
CNTNAP3B-211ENST00000612828 ARID3CA6NKF2 412 aa14.19□□□□□ -0.14
CNTNAP3B-211ENST00000612828 TNNT3P45378 269 aaPredicted RBP14.19□□□□□ -0.14
CNTNAP3B-211ENST00000612828 FGD1P98174 961 aa14.19□□□□□ -0.14
CNTNAP3B-211ENST00000612828 DDX10Q13206 875 aaKnown RBP14.18□□□□□ -0.14
CNTNAP3B-211ENST00000612828 RTN4Q9NQC3 1192 aaKnown RBP14.18□□□□□ -0.14
CNTNAP3B-211ENST00000612828 LMOD2Q6P5Q4 547 aa14.16□□□□□ -0.14
CNTNAP3B-211ENST00000612828 PPM1FP49593 454 aaPredicted RBP14.15□□□□□ -0.14
CNTNAP3B-211ENST00000612828 GOLGA6L6A8MZA4 724 aa14.15□□□□□ -0.14
CNTNAP3B-211ENST00000612828 DRC7Q8IY82 874 aa14.15□□□□□ -0.15
CNTNAP3B-211ENST00000612828 CREBRFQ8IUR6 639 aa14.14□□□□□ -0.15
CNTNAP3B-211ENST00000612828 HIRIP3Q9BW71 556 aaPredicted RBP14.14□□□□□ -0.15
CNTNAP3B-211ENST00000612828 MEX3CQ5U5Q3 659 aaKnown RBP14.12□□□□□ -0.15
CNTNAP3B-211ENST00000612828 VPS53Q5VIR6 699 aa14.11□□□□□ -0.15
CNTNAP3B-211ENST00000612828 ANP32EQ9BTT0 268 aa14.09□□□□□ -0.15
CNTNAP3B-211ENST00000612828 PTMSP20962 102 aa14.09□□□□□ -0.15
CNTNAP3B-211ENST00000612828 NEUROD2Q15784 382 aa14.07□□□□□ -0.16
CNTNAP3B-211ENST00000612828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.06□□□□□ -0.16
CNTNAP3B-211ENST00000612828 CHAF1AQ13111 956 aaPredicted RBP14.06□□□□□ -0.16
CNTNAP3B-211ENST00000612828 IRX6P78412 446 aaPredicted RBP14.05□□□□□ -0.16
CNTNAP3B-211ENST00000612828 CEP89Q96ST8 783 aa14.05□□□□□ -0.16
CNTNAP3B-211ENST00000612828 PPP4R2Q9NY27 417 aa14.05□□□□□ -0.16
CNTNAP3B-211ENST00000612828 HNRNPUQ00839 825 aaKnown RBP eCLIP14.05□□□□□ -0.16
CNTNAP3B-211ENST00000612828 GNL2Q13823 731 aaKnown RBP14.04□□□□□ -0.16
CNTNAP3B-211ENST00000612828 GOLGA6L22H0YM25 854 aa14.03□□□□□ -0.16
CNTNAP3B-211ENST00000612828 KCNJ4P48050 445 aa14.02□□□□□ -0.16
CNTNAP3B-211ENST00000612828 L1TD1Q5T7N2 865 aaKnown RBP14.02□□□□□ -0.16
CNTNAP3B-211ENST00000612828 G3V3G9 751 aa14.02□□□□□ -0.17
CNTNAP3B-211ENST00000612828 DCAF8Q5TAQ9 597 aa14.02□□□□□ -0.17
CNTNAP3B-211ENST00000612828 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.01□□□□□ -0.17
CNTNAP3B-211ENST00000612828 FAM9BQ8IZU0 186 aa14□□□□□ -0.17
CNTNAP3B-211ENST00000612828 OS9Q13438 667 aaPredicted RBP13.99□□□□□ -0.17
CNTNAP3B-211ENST00000612828 BCCIPQ9P287 314 aaKnown RBP eCLIP13.99□□□□□ -0.17
CNTNAP3B-211ENST00000612828 PAF1Q8N7H5 531 aa13.99□□□□□ -0.17
CNTNAP3B-211ENST00000612828 CCDC97Q96F63 343 aaPredicted RBP13.99□□□□□ -0.17
CNTNAP3B-211ENST00000612828 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
CNTNAP3B-211ENST00000612828 BBXQ8WY36 941 aaPredicted RBP13.98□□□□□ -0.17
CNTNAP3B-211ENST00000612828 NRDCO43847 1150 aa13.97□□□□□ -0.17
CNTNAP3B-211ENST00000612828 ZNF777Q9ULD5 760 aaPredicted RBP13.97□□□□□ -0.17
CNTNAP3B-211ENST00000612828 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
CNTNAP3B-211ENST00000612828 TMX4Q9H1E5 349 aaPredicted RBP13.97□□□□□ -0.17
CNTNAP3B-211ENST00000612828 RSF1Q96T23 1441 aaPredicted RBP13.97□□□□□ -0.17
CNTNAP3B-211ENST00000612828 PPM1GO15355 546 aaPredicted RBP13.96□□□□□ -0.17
CNTNAP3B-211ENST00000612828 KLHL34Q8N239 644 aa13.96□□□□□ -0.17
CNTNAP3B-211ENST00000612828 SENP3-EIF4A1A0A087X0R7 540 aa13.95□□□□□ -0.18
CNTNAP3B-211ENST00000612828 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
CNTNAP3B-211ENST00000612828 CWC22Q9HCG8 908 aaKnown RBP13.94□□□□□ -0.18
CNTNAP3B-211ENST00000612828 GOLGA6L1Q8N7Z2 621 aa13.93□□□□□ -0.18
CNTNAP3B-211ENST00000612828 CHIC2Q9UKJ5 165 aa13.93□□□□□ -0.18
CNTNAP3B-211ENST00000612828 CASC1Q6TDU7 716 aa13.93□□□□□ -0.18
CNTNAP3B-211ENST00000612828 GOLGA6L4A6NEF3 574 aa13.92□□□□□ -0.18
CNTNAP3B-211ENST00000612828 TONSLQ96HA7 1378 aa13.91□□□□□ -0.18
CNTNAP3B-211ENST00000612828 ZNF330Q9Y3S2 320 aaPredicted RBP13.91□□□□□ -0.18
CNTNAP3B-211ENST00000612828 CEP162Q5TB80 1403 aa13.9□□□□□ -0.18
CNTNAP3B-211ENST00000612828 SETQ01105 290 aaPredicted RBP13.89□□□□□ -0.19
CNTNAP3B-211ENST00000612828 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.89□□□□□ -0.19
CNTNAP3B-211ENST00000612828 CLIP1P30622 1438 aa13.88□□□□□ -0.19
CNTNAP3B-211ENST00000612828 PES1O00541 588 aaKnown RBP13.87□□□□□ -0.19
CNTNAP3B-211ENST00000612828 SEPT11Q9NVA2 429 aaKnown RBP13.87□□□□□ -0.19
CNTNAP3B-211ENST00000612828 RAD21O60216 631 aa13.86□□□□□ -0.19
CNTNAP3B-211ENST00000612828 CCDC9Q9Y3X0 531 aaKnown RBP13.85□□□□□ -0.19
CNTNAP3B-211ENST00000612828 PLCD4Q9BRC7 762 aa13.85□□□□□ -0.19
CNTNAP3B-211ENST00000612828 RASSF8Q8NHQ8 419 aa13.85□□□□□ -0.19
CNTNAP3B-211ENST00000612828 WDR43Q15061 677 aaKnown RBP eCLIP13.85□□□□□ -0.19
CNTNAP3B-211ENST00000612828 RBM19Q9Y4C8 960 aaKnown RBP13.85□□□□□ -0.19
CNTNAP3B-211ENST00000612828 DHX37Q8IY37 1157 aaKnown RBP13.84□□□□□ -0.19
CNTNAP3B-211ENST00000612828 DCAF8L1A6NGE4 600 aa13.83□□□□□ -0.19
CNTNAP3B-211ENST00000612828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.83□□□□□ -0.24e-8■□□□□ 10.5
CNTNAP3B-211ENST00000612828 TCEAL9Q9UHQ7 104 aa13.83□□□□□ -0.2
CNTNAP3B-211ENST00000612828 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
CNTNAP3B-211ENST00000612828 HSP90B1P14625 803 aaKnown RBP13.82□□□□□ -0.2
CNTNAP3B-211ENST00000612828 CBX1P83916 185 aa13.82□□□□□ -0.2
CNTNAP3B-211ENST00000612828 MRS2Q9HD23 443 aa13.82□□□□□ -0.2
CNTNAP3B-211ENST00000612828 SUPT16HQ9Y5B9 1047 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms