RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 CASC1Q6TDU7 716 aa16.24■□□□□ 0.19
HLCS-207ENST00000612277 DEKP35659 375 aaKnown RBP16.2■□□□□ 0.18
HLCS-207ENST00000612277 MRS2Q9HD23 443 aa16.2■□□□□ 0.18
HLCS-207ENST00000612277 ARID4BQ4LE39 1312 aaPredicted RBP16.19■□□□□ 0.18
HLCS-207ENST00000612277 TULP1O00294 542 aaPredicted RBP16.18■□□□□ 0.18
HLCS-207ENST00000612277 CALRP27797 417 aaKnown RBP16.18■□□□□ 0.18
HLCS-207ENST00000612277 HSP90AB1P08238 724 aaKnown RBP16.12■□□□□ 0.17
HLCS-207ENST00000612277 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.11■□□□□ 0.17
HLCS-207ENST00000612277 DRC7Q8IY82 874 aa16.1■□□□□ 0.17
HLCS-207ENST00000612277 ARID3AQ99856 593 aa16.08■□□□□ 0.17
HLCS-207ENST00000612277 MIER1Q8N108 512 aa16.05■□□□□ 0.16
HLCS-207ENST00000612277 PNNQ9H307 717 aaKnown RBP16.05■□□□□ 0.16
HLCS-207ENST00000612277 SETQ01105 290 aaPredicted RBP16.03■□□□□ 0.16
HLCS-207ENST00000612277 GOLGA6L4A6NEF3 574 aa16.03■□□□□ 0.16
HLCS-207ENST00000612277 NOC3LQ8WTT2 800 aaKnown RBP16.02■□□□□ 0.16
HLCS-207ENST00000612277 GOLGA6L1Q8N7Z2 621 aa16.02■□□□□ 0.16
HLCS-207ENST00000612277 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.16
HLCS-207ENST00000612277 KIAA2012Q0VF49 1180 aa16.01■□□□□ 0.15
HLCS-207ENST00000612277 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
HLCS-207ENST00000612277 ZNF777Q9ULD5 760 aaPredicted RBP16■□□□□ 0.15
HLCS-207ENST00000612277 HSCBQ8IWL3 235 aa15.99■□□□□ 0.15
HLCS-207ENST00000612277 PPP4R2Q9NY27 417 aa15.99■□□□□ 0.15
HLCS-207ENST00000612277 ZBTB7CA1YPR0 619 aa15.97■□□□□ 0.15
HLCS-207ENST00000612277 FTSJ3Q8IY81 847 aaKnown RBP15.97■□□□□ 0.15
HLCS-207ENST00000612277 PTMSP20962 102 aa15.96■□□□□ 0.15
HLCS-207ENST00000612277 ESF1Q9H501 851 aaKnown RBP15.95■□□□□ 0.14
HLCS-207ENST00000612277 TAOK2Q9UL54 1235 aa15.94■□□□□ 0.14
HLCS-207ENST00000612277 SUPT16HQ9Y5B9 1047 aaKnown RBP15.94■□□□□ 0.14
HLCS-207ENST00000612277 HSP90AA2PQ14568 343 aaPredicted RBP15.93■□□□□ 0.14
HLCS-207ENST00000612277 FGD1P98174 961 aa15.93■□□□□ 0.14
HLCS-207ENST00000612277 USP35Q9P2H5 1018 aa15.93■□□□□ 0.14
HLCS-207ENST00000612277 RGS3P49796 1198 aa15.93■□□□□ 0.14
HLCS-207ENST00000612277 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
HLCS-207ENST00000612277 A0A0U1RQG5 324 aaPredicted RBP15.92■□□□□ 0.14
HLCS-207ENST00000612277 VSIG10Q8N0Z9 540 aa15.9■□□□□ 0.14
HLCS-207ENST00000612277 CLSTN1O94985 981 aa15.9■□□□□ 0.14
HLCS-207ENST00000612277 NAP1L2Q9ULW6 460 aaPredicted RBP15.88■□□□□ 0.13
HLCS-207ENST00000612277 ARID3CA6NKF2 412 aa15.88■□□□□ 0.13
HLCS-207ENST00000612277 RSPH6AQ9H0K4 717 aa15.87■□□□□ 0.13
HLCS-207ENST00000612277 A0A0G2JS52 829 aa15.86■□□□□ 0.13
HLCS-207ENST00000612277 KCNJ4P48050 445 aa15.86■□□□□ 0.13
HLCS-207ENST00000612277 CHMP4BQ9H444 224 aaKnown RBP15.86■□□□□ 0.13
HLCS-207ENST00000612277 P3H3Q8IVL6 736 aa15.85■□□□□ 0.13
HLCS-207ENST00000612277 GBP4Q96PP9 640 aa15.85■□□□□ 0.13
HLCS-207ENST00000612277 MCCP23508 829 aa15.84■□□□□ 0.13
HLCS-207ENST00000612277 SPRYD3Q8NCJ5 442 aa15.83■□□□□ 0.12
HLCS-207ENST00000612277 PODXL2Q9NZ53 605 aa15.82■□□□□ 0.12
HLCS-207ENST00000612277 GOLGA6L3A6NEY3 463 aa15.82■□□□□ 0.12
HLCS-207ENST00000612277 CFAP53Q96M91 514 aa15.81■□□□□ 0.12
HLCS-207ENST00000612277 FBLN2P98095 1184 aa15.81■□□□□ 0.12
HLCS-207ENST00000612277 EIF4G2P78344 907 aaKnown RBP eCLIP15.81■□□□□ 0.12
HLCS-207ENST00000612277 TPM4P67936 248 aa15.81■□□□□ 0.12
HLCS-207ENST00000612277 SYAP1Q96A49 352 aaPredicted RBP15.8■□□□□ 0.12
HLCS-207ENST00000612277 KDM2AQ9Y2K7 1162 aa15.79■□□□□ 0.12
HLCS-207ENST00000612277 MS4A1P11836 297 aa15.79■□□□□ 0.12
HLCS-207ENST00000612277 CFAP44Q96MT7 982 aa15.79■□□□□ 0.12
HLCS-207ENST00000612277 OS9Q13438 667 aaPredicted RBP15.78■□□□□ 0.12
HLCS-207ENST00000612277 GZF1Q9H116 711 aaPredicted RBP15.77■□□□□ 0.12
HLCS-207ENST00000612277 RBM19Q9Y4C8 960 aaKnown RBP15.77■□□□□ 0.12
HLCS-207ENST00000612277 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
HLCS-207ENST00000612277 PRM3Q9NNZ6 103 aa15.77■□□□□ 0.12
HLCS-207ENST00000612277 ZNF771Q7L3S4 317 aaPredicted RBP15.77■□□□□ 0.11
HLCS-207ENST00000612277 GNL2Q13823 731 aaKnown RBP15.76■□□□□ 0.11
HLCS-207ENST00000612277 HIRIP3Q9BW71 556 aaPredicted RBP15.75■□□□□ 0.11
HLCS-207ENST00000612277 B4GALNT3Q6L9W6 998 aa15.74■□□□□ 0.11
HLCS-207ENST00000612277 HTATSF1O43719 755 aaKnown RBP15.74■□□□□ 0.11
HLCS-207ENST00000612277 FRAT1Q92837 279 aaPredicted RBP15.74■□□□□ 0.11
HLCS-207ENST00000612277 APPP05067 770 aa15.73■□□□□ 0.11
HLCS-207ENST00000612277 DCAF1Q9Y4B6 1507 aa15.72■□□□□ 0.11
HLCS-207ENST00000612277 PATL2C9JE40 543 aaKnown RBP15.71■□□□□ 0.11
HLCS-207ENST00000612277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.71■□□□□ 0.11
HLCS-207ENST00000612277 MAPK8IP3Q9UPT6 1336 aa15.7■□□□□ 0.1
HLCS-207ENST00000612277 GPS2Q13227 327 aa15.69■□□□□ 0.1
HLCS-207ENST00000612277 SENP3-EIF4A1A0A087X0R7 540 aa15.68■□□□□ 0.1
HLCS-207ENST00000612277 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
HLCS-207ENST00000612277 C14orf37Q86TY3 774 aa15.68■□□□□ 0.1
HLCS-207ENST00000612277 TPM3P06753 285 aa15.67■□□□□ 0.1
HLCS-207ENST00000612277 KNSTRNQ9Y448 316 aa15.66■□□□□ 0.1
HLCS-207ENST00000612277 GOLGA2Q08379 1002 aa15.66■□□□□ 0.1
HLCS-207ENST00000612277 CHIC2Q9UKJ5 165 aa15.66■□□□□ 0.1
HLCS-207ENST00000612277 PDE4CQ08493 712 aa15.65■□□□□ 0.1
HLCS-207ENST00000612277 RRP12Q5JTH9 1297 aaKnown RBP15.64■□□□□ 0.09
HLCS-207ENST00000612277 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
HLCS-207ENST00000612277 NEUROD2Q15784 382 aa15.64■□□□□ 0.09
HLCS-207ENST00000612277 CSPP1Q1MSJ5 1256 aa15.63■□□□□ 0.09
HLCS-207ENST00000612277 TEX35Q5T0J7 233 aa15.63■□□□□ 0.09
HLCS-207ENST00000612277 NOM1Q5C9Z4 860 aaKnown RBP15.63■□□□□ 0.09
HLCS-207ENST00000612277 SLKQ9H2G2 1235 aaPredicted RBP15.62■□□□□ 0.09
HLCS-207ENST00000612277 CDCA8Q53HL2 280 aa15.62■□□□□ 0.09
HLCS-207ENST00000612277 PHF14O94880 888 aa15.61■□□□□ 0.09
HLCS-207ENST00000612277 CALD1Q05682 793 aaKnown RBP15.61■□□□□ 0.09
HLCS-207ENST00000612277 NUDCQ9Y266 331 aa15.61■□□□□ 0.09
HLCS-207ENST00000612277 CCDC34Q96HJ3 373 aa15.61■□□□□ 0.09
HLCS-207ENST00000612277 CEP89Q96ST8 783 aa15.61■□□□□ 0.09
HLCS-207ENST00000612277 KIAA1211Q6ZU35 1233 aa15.59■□□□□ 0.09
HLCS-207ENST00000612277 PLEKHG5O94827 1062 aa15.58■□□□□ 0.09
HLCS-207ENST00000612277 TAF7LQ5H9L4 462 aa15.58■□□□□ 0.08
HLCS-207ENST00000612277 CCDC70Q6NSX1 233 aa15.58■□□□□ 0.08
HLCS-207ENST00000612277 HSP90B1P14625 803 aaKnown RBP15.57■□□□□ 0.08
HLCS-207ENST00000612277 NPHP1O15259 732 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms