RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 MROH2BQ7Z745 1585 aa5.18□□□□□ -1.58
RNF38-210ENST00000611646 MTUS2Q5JR59 1369 aa5.18□□□□□ -1.58
RNF38-210ENST00000611646 TMC1Q8TDI8 760 aa5.17□□□□□ -1.58
RNF38-210ENST00000611646 KCNH8Q96L42 1107 aa5.17□□□□□ -1.58
RNF38-210ENST00000611646 SLC24A1O60721 1099 aa5.16□□□□□ -1.58
RNF38-210ENST00000611646 CHGAP10645 457 aaKnown RBP5.16□□□□□ -1.58
RNF38-210ENST00000611646 EIF5BO60841 1220 aaKnown RBP5.15□□□□□ -1.59
RNF38-210ENST00000611646 FOXD1Q16676 465 aa5.14□□□□□ -1.59
RNF38-210ENST00000611646 RGL3Q3MIN7 710 aa5.14□□□□□ -1.59
RNF38-210ENST00000611646 EIF4G2P78344 907 aaKnown RBP eCLIP5.14□□□□□ -1.59
RNF38-210ENST00000611646 CEP164Q9UPV0 1460 aa5.14□□□□□ -1.59
RNF38-210ENST00000611646 B4GALNT3Q6L9W6 998 aa5.14□□□□□ -1.59
RNF38-210ENST00000611646 ANP32EQ9BTT0 268 aa5.14□□□□□ -1.59
RNF38-210ENST00000611646 RUSC2Q8N2Y8 1516 aa5.13□□□□□ -1.59
RNF38-210ENST00000611646 ZBTB47Q9UFB7 747 aaPredicted RBP5.13□□□□□ -1.59
RNF38-210ENST00000611646 WIZO95785 1651 aa5.13□□□□□ -1.59
RNF38-210ENST00000611646 BAZ1BQ9UIG0 1483 aaKnown RBP5.13□□□□□ -1.59
RNF38-210ENST00000611646 EEA1Q15075 1411 aa5.12□□□□□ -1.59
RNF38-210ENST00000611646 CCNB3Q8WWL7 1395 aa5.11□□□□□ -1.59
RNF38-210ENST00000611646 RTN4Q9NQC3 1192 aaKnown RBP5.11□□□□□ -1.59
RNF38-210ENST00000611646 LAS1LQ9Y4W2 734 aaKnown RBP5.1□□□□□ -1.59
RNF38-210ENST00000611646 KIF27Q86VH2 1401 aa5.1□□□□□ -1.59
RNF38-210ENST00000611646 BAZ1AQ9NRL2 1556 aaPredicted RBP5.1□□□□□ -1.59
RNF38-210ENST00000611646 RBM19Q9Y4C8 960 aaKnown RBP5.09□□□□□ -1.59
RNF38-210ENST00000611646 TSHZ2Q9NRE2 1034 aa5.09□□□□□ -1.59
RNF38-210ENST00000611646 WDR43Q15061 677 aaKnown RBP eCLIP5.09□□□□□ -1.59
RNF38-210ENST00000611646 CHMP7Q8WUX9 453 aaPredicted RBP5.09□□□□□ -1.59
RNF38-210ENST00000611646 VPS8Q8N3P4 1428 aa5.09□□□□□ -1.6
RNF38-210ENST00000611646 TSPY4P0CV99 314 aa5.09□□□□□ -1.6
RNF38-210ENST00000611646 TSPY10P0CW01 314 aa5.09□□□□□ -1.6
RNF38-210ENST00000611646 NACADO15069 1562 aa5.08□□□□□ -1.6
RNF38-210ENST00000611646 RAB3GAP2Q9H2M9 1393 aa5.08□□□□□ -1.6
RNF38-210ENST00000611646 CC2D1BQ5T0F9 858 aaKnown RBP5.08□□□□□ -1.6
RNF38-210ENST00000611646 HSPA5P11021 654 aaKnown RBP5.08□□□□□ -1.6
RNF38-210ENST00000611646 CARD11Q9BXL7 1154 aa5.08□□□□□ -1.6
RNF38-210ENST00000611646 NEUROD2Q15784 382 aa5.07□□□□□ -1.6
RNF38-210ENST00000611646 CUX2O14529 1486 aa5.07□□□□□ -1.6
RNF38-210ENST00000611646 TNNT2P45379 298 aaPredicted RBP5.07□□□□□ -1.6
RNF38-210ENST00000611646 RAPGEF2Q9Y4G8 1499 aa5.07□□□□□ -1.6
RNF38-210ENST00000611646 PLEKHG5O94827 1062 aa5.07□□□□□ -1.6
RNF38-210ENST00000611646 CFDP1Q9UEE9 299 aaPredicted RBP5.06□□□□□ -1.6
RNF38-210ENST00000611646 HSP90AA1P07900 732 aaKnown RBP5.06□□□□□ -1.6
RNF38-210ENST00000611646 CARMIL1Q5VZK9 1371 aa5.06□□□□□ -1.6
RNF38-210ENST00000611646 RGS3P49796 1198 aa5.05□□□□□ -1.6
RNF38-210ENST00000611646 SETD5Q9C0A6 1442 aa5.05□□□□□ -1.6
RNF38-210ENST00000611646 NEFMP07197 916 aa5.05□□□□□ -1.6
RNF38-210ENST00000611646 PPP4R2Q9NY27 417 aa5.05□□□□□ -1.6
RNF38-210ENST00000611646 EIF4G1Q04637 1599 aaKnown RBP5.04□□□□□ -1.6
RNF38-210ENST00000611646 DCAF11Q8TEB1 546 aa5.04□□□□□ -1.6
RNF38-210ENST00000611646 STAG3Q9UJ98 1225 aa5.04□□□□□ -1.6
RNF38-210ENST00000611646 DHX57Q6P158 1386 aaKnown RBP5.04□□□□□ -1.6
RNF38-210ENST00000611646 NOP58Q9Y2X3 529 aaKnown RBP5.03□□□□□ -1.6
RNF38-210ENST00000611646 UPF2Q9HAU5 1272 aaKnown RBP5.03□□□□□ -1.6
RNF38-210ENST00000611646 PLEKHD1A6NEE1 506 aa5.03□□□□□ -1.6
RNF38-210ENST00000611646 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.02□□□□□ -1.61
RNF38-210ENST00000611646 PPM1GO15355 546 aaPredicted RBP5.02□□□□□ -1.61
RNF38-210ENST00000611646 TPRNQ4KMQ1 711 aa5.02□□□□□ -1.61
RNF38-210ENST00000611646 FRAT1Q92837 279 aaPredicted RBP5.02□□□□□ -1.61
RNF38-210ENST00000611646 PPP1R15AO75807 674 aaPredicted RBP5.02□□□□□ -1.61
RNF38-210ENST00000611646 FHOD3Q2V2M9 1422 aa5.02□□□□□ -1.61
RNF38-210ENST00000611646 TDRD9Q8NDG6 1382 aaKnown RBP5.01□□□□□ -1.61
RNF38-210ENST00000611646 DEKP35659 375 aaKnown RBP5.01□□□□□ -1.61
RNF38-210ENST00000611646 SPRYD3Q8NCJ5 442 aa5.01□□□□□ -1.61
RNF38-210ENST00000611646 KNSTRNQ9Y448 316 aa5.01□□□□□ -1.61
RNF38-210ENST00000611646 ARHGAP35Q9NRY4 1499 aa5.01□□□□□ -1.61
RNF38-210ENST00000611646 CCER2I3L3R5 266 aa5□□□□□ -1.61
RNF38-210ENST00000611646 PKD2Q13563 968 aa5□□□□□ -1.61
RNF38-210ENST00000611646 L3MBTL2Q969R5 705 aa5□□□□□ -1.61
RNF38-210ENST00000611646 MPHOSPH9Q99550 1183 aa5□□□□□ -1.61
RNF38-210ENST00000611646 TOP2AP11388 1531 aaKnown RBP5□□□□□ -1.61
RNF38-210ENST00000611646 SAFB2Q14151 953 aaKnown RBP eCLIP4.99□□□□□ -1.61
RNF38-210ENST00000611646 FHAD1B1AJZ9 1412 aa4.99□□□□□ -1.61
RNF38-210ENST00000611646 ZBTB7CA1YPR0 619 aa4.99□□□□□ -1.61
RNF38-210ENST00000611646 PLIN1O60240 522 aa4.97□□□□□ -1.61
RNF38-210ENST00000611646 ESF1Q9H501 851 aaKnown RBP4.97□□□□□ -1.61
RNF38-210ENST00000611646 UNC13AQ9UPW8 1703 aa4.97□□□□□ -1.61
RNF38-210ENST00000611646 NPM1P06748 294 aaKnown RBP eCLIP4.97□□□□□ -1.61
RNF38-210ENST00000611646 CCDC146Q8IYE0 955 aa4.96□□□□□ -1.62
RNF38-210ENST00000611646 ANP32BQ92688 251 aaKnown RBP4.96□□□□□ -1.62
RNF38-210ENST00000611646 DDRGK1Q96HY6 314 aa4.96□□□□□ -1.62
RNF38-210ENST00000611646 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.96□□□□□ -1.62
RNF38-210ENST00000611646 U2SURPO15042 1029 aaKnown RBP4.96□□□□□ -1.62
RNF38-210ENST00000611646 NCLP19338 710 aaKnown RBP4.96□□□□□ -1.62
RNF38-210ENST00000611646 SLC4A3P48751 1232 aa4.96□□□□□ -1.62
RNF38-210ENST00000611646 FTSJ3Q8IY81 847 aaKnown RBP4.96□□□□□ -1.62
RNF38-210ENST00000611646 HNRNPMP52272 730 aaKnown RBP eCLIP4.95□□□□□ -1.62
RNF38-210ENST00000611646 SMARCA4P51532 1647 aa4.95□□□□□ -1.62
RNF38-210ENST00000611646 SOX12O15370 315 aa4.95□□□□□ -1.62
RNF38-210ENST00000611646 NUTM2DQ5VT03 806 aaPredicted RBP4.95□□□□□ -1.62
RNF38-210ENST00000611646 C14orf37Q86TY3 774 aa4.95□□□□□ -1.62
RNF38-210ENST00000611646 RCAN3Q9UKA8 241 aa4.95□□□□□ -1.62
RNF38-210ENST00000611646 TIMELESSQ9UNS1 1208 aa4.95□□□□□ -1.62
RNF38-210ENST00000611646 ARID4BQ4LE39 1312 aaPredicted RBP4.95□□□□□ -1.62
RNF38-210ENST00000611646 NUP155O75694 1391 aa4.94□□□□□ -1.62
RNF38-210ENST00000611646 BECN1Q14457 450 aa4.94□□□□□ -1.62
RNF38-210ENST00000611646 SLKQ9H2G2 1235 aaPredicted RBP4.94□□□□□ -1.62
RNF38-210ENST00000611646 ROCK2O75116 1388 aaKnown RBP4.94□□□□□ -1.62
RNF38-210ENST00000611646 SMARCA2P51531 1590 aa4.94□□□□□ -1.62
RNF38-210ENST00000611646 TMF1P82094 1093 aa4.94□□□□□ -1.62
RNF38-210ENST00000611646 ADRA2BP18089 450 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms