RNA–Protein interactions for RNA: ENST00000610543.4

CNTFR-204, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNTFR, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-204ENST00000610543 RRBP1Q9P2E9 1410 aaKnown RBP22.88■■□□□ 1.25
CNTFR-204ENST00000610543 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
CNTFR-204ENST00000610543 CFAP43Q8NDM7 1665 aa22.82■■□□□ 1.24
CNTFR-204ENST00000610543 PCF11O94913 1555 aaKnown RBP22.8■■□□□ 1.24
CNTFR-204ENST00000610543 TARBP1Q13395 1621 aaKnown RBP22.8■■□□□ 1.24
CNTFR-204ENST00000610543 DNAJC5Q9H3Z4 198 aa22.8■■□□□ 1.24
CNTFR-204ENST00000610543 TDRD9Q8NDG6 1382 aaKnown RBP22.79■■□□□ 1.24
CNTFR-204ENST00000610543 FYCO1Q9BQS8 1478 aa22.77■■□□□ 1.24
CNTFR-204ENST00000610543 CCNB3Q8WWL7 1395 aa22.76■■□□□ 1.23
CNTFR-204ENST00000610543 MRC2Q9UBG0 1479 aa22.76■■□□□ 1.23
CNTFR-204ENST00000610543 LRRC9Q6ZRR7 1453 aa22.75■■□□□ 1.23
CNTFR-204ENST00000610543 AQRO60306 1485 aaKnown RBP eCLIP22.75■■□□□ 1.23
CNTFR-204ENST00000610543 FHOD3Q2V2M9 1422 aa22.73■■□□□ 1.23
CNTFR-204ENST00000610543 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
CNTFR-204ENST00000610543 FMN1Q68DA7 1419 aa22.7■■□□□ 1.22
CNTFR-204ENST00000610543 CASKIN1Q8WXD9 1431 aa22.7■■□□□ 1.22
CNTFR-204ENST00000610543 SAMD9Q5K651 1589 aa22.69■■□□□ 1.22
CNTFR-204ENST00000610543 CLSPNQ9HAW4 1339 aa22.68■■□□□ 1.22
CNTFR-204ENST00000610543 P3H3Q8IVL6 736 aa22.67■■□□□ 1.22
CNTFR-204ENST00000610543 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
CNTFR-204ENST00000610543 WDR62O43379 1518 aa22.61■■□□□ 1.21
CNTFR-204ENST00000610543 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
CNTFR-204ENST00000610543 SNAPC4Q5SXM2 1469 aa22.6■■□□□ 1.21
CNTFR-204ENST00000610543 DHX57Q6P158 1386 aaKnown RBP22.59■■□□□ 1.21
CNTFR-204ENST00000610543 IFT140Q96RY7 1462 aa22.59■■□□□ 1.21
CNTFR-204ENST00000610543 ATP1B4Q9UN42 357 aaPredicted RBP22.58■■□□□ 1.21
CNTFR-204ENST00000610543 GRIN2BQ13224 1484 aa22.57■■□□□ 1.2
CNTFR-204ENST00000610543 PHLDB1Q86UU1 1377 aa22.56■■□□□ 1.2
CNTFR-204ENST00000610543 ZNF316A6NFI3 1004 aaPredicted RBP22.53■■□□□ 1.2
CNTFR-204ENST00000610543 DIEXFQ68CQ4 756 aaKnown RBP22.53■■□□□ 1.2
CNTFR-204ENST00000610543 IQGAP2Q13576 1575 aa22.52■■□□□ 1.2
CNTFR-204ENST00000610543 ITGAEP38570 1179 aa22.48■■□□□ 1.19
CNTFR-204ENST00000610543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.47■■□□□ 1.19
CNTFR-204ENST00000610543 MTUS2Q5JR59 1369 aa22.45■■□□□ 1.19
CNTFR-204ENST00000610543 LRRIQ1Q96JM4 1722 aa22.45■■□□□ 1.18
CNTFR-204ENST00000610543 FAM50AQ14320 339 aaKnown RBP22.43■■□□□ 1.18
CNTFR-204ENST00000610543 CCDC18Q5T9S5 1454 aa22.43■■□□□ 1.18
CNTFR-204ENST00000610543 RAB3GAP2Q9H2M9 1393 aa22.43■■□□□ 1.18
CNTFR-204ENST00000610543 EHBP1L1Q8N3D4 1523 aa22.43■■□□□ 1.18
CNTFR-204ENST00000610543 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
CNTFR-204ENST00000610543 SETD5Q9C0A6 1442 aa22.42■■□□□ 1.18
CNTFR-204ENST00000610543 ZNF608Q9ULD9 1512 aaPredicted RBP22.42■■□□□ 1.18
CNTFR-204ENST00000610543 EIF4G3O43432 1585 aaKnown RBP22.41■■□□□ 1.18
CNTFR-204ENST00000610543 SUPT6HQ7KZ85 1726 aaKnown RBP22.4■■□□□ 1.18
CNTFR-204ENST00000610543 FGD6Q6ZV73 1430 aa22.38■■□□□ 1.17
CNTFR-204ENST00000610543 UGGT2Q9NYU1 1516 aa22.38■■□□□ 1.17
CNTFR-204ENST00000610543 NCOA2Q15596 1464 aa22.33■■□□□ 1.16
CNTFR-204ENST00000610543 KIAA0586Q9BVV6 1533 aa22.32■■□□□ 1.16
CNTFR-204ENST00000610543 MYOM3Q5VTT5 1437 aa22.31■■□□□ 1.16
CNTFR-204ENST00000610543 GRIN2AQ12879 1464 aa22.31■■□□□ 1.16
CNTFR-204ENST00000610543 MAGI1Q96QZ7 1491 aaPredicted RBP22.31■■□□□ 1.16
CNTFR-204ENST00000610543 MAPKBP1O60336 1514 aa22.29■■□□□ 1.16
CNTFR-204ENST00000610543 KIAA0556O60303 1618 aa22.28■■□□□ 1.16
CNTFR-204ENST00000610543 ARHGEF11O15085 1522 aa22.27■■□□□ 1.16
CNTFR-204ENST00000610543 EPRSP07814 1512 aaKnown RBP22.27■■□□□ 1.16
CNTFR-204ENST00000610543 MAGI3Q5TCQ9 1506 aa22.23■■□□□ 1.15
CNTFR-204ENST00000610543 PTPN23Q9H3S7 1636 aa22.23■■□□□ 1.15
CNTFR-204ENST00000610543 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
CNTFR-204ENST00000610543 DISP1Q96F81 1524 aa22.21■■□□□ 1.15
CNTFR-204ENST00000610543 HFM1A2PYH4 1435 aa22.18■■□□□ 1.14
CNTFR-204ENST00000610543 CDK13Q14004 1512 aaKnown RBP22.18■■□□□ 1.14
CNTFR-204ENST00000610543 TCOF1Q13428 1488 aaKnown RBP22.16■■□□□ 1.14
CNTFR-204ENST00000610543 RAPGEF6Q8TEU7 1601 aa22.15■■□□□ 1.14
CNTFR-204ENST00000610543 CEP170Q5SW79 1584 aa22.14■■□□□ 1.14
CNTFR-204ENST00000610543 CENPBP07199 599 aaPredicted RBP22.14■■□□□ 1.14
CNTFR-204ENST00000610543 CHMP7Q8WUX9 453 aaPredicted RBP22.14■■□□□ 1.13
CNTFR-204ENST00000610543 MIA2Q96PC5 1412 aa22.12■■□□□ 1.13
CNTFR-204ENST00000610543 PTPRKQ15262 1439 aa22.1■■□□□ 1.13
CNTFR-204ENST00000610543 TIMELESSQ9UNS1 1208 aa22.08■■□□□ 1.13
CNTFR-204ENST00000610543 NUP160Q12769 1436 aa22.08■■□□□ 1.13
CNTFR-204ENST00000610543 UACAQ9BZF9 1416 aa22.08■■□□□ 1.13
CNTFR-204ENST00000610543 NUP153P49790 1475 aaKnown RBP22.08■■□□□ 1.12
CNTFR-204ENST00000610543 NAIPQ13075 1403 aa22.08■■□□□ 1.12
CNTFR-204ENST00000610543 GCC2Q8IWJ2 1684 aa22.07■■□□□ 1.12
CNTFR-204ENST00000610543 CARMIL2Q6F5E8 1435 aa22.06■■□□□ 1.12
CNTFR-204ENST00000610543 AKNAQ7Z591 1439 aa22.06■■□□□ 1.12
CNTFR-204ENST00000610543 ACIN1Q9UKV3 1341 aaKnown RBP22.05■■□□□ 1.12
CNTFR-204ENST00000610543 CDK11AQ9UQ88 783 aaPredicted RBP22.04■■□□□ 1.12
CNTFR-204ENST00000610543 MIER1Q8N108 512 aa22.02■■□□□ 1.11
CNTFR-204ENST00000610543 FBLN2P98095 1184 aa22.01■■□□□ 1.11
CNTFR-204ENST00000610543 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
CNTFR-204ENST00000610543 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
CNTFR-204ENST00000610543 SIN3AQ96ST3 1273 aa21.97■■□□□ 1.11
CNTFR-204ENST00000610543 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
CNTFR-204ENST00000610543 ITSN2Q9NZM3 1697 aa21.96■■□□□ 1.11
CNTFR-204ENST00000610543 TROQ12816 1431 aaPredicted RBP21.94■■□□□ 1.1
CNTFR-204ENST00000610543 JPH4Q96JJ6 628 aa21.94■■□□□ 1.1
CNTFR-204ENST00000610543 ADCY10Q96PN6 1610 aa21.94■■□□□ 1.1
CNTFR-204ENST00000610543 PLB1Q6P1J6 1458 aa21.93■■□□□ 1.1
CNTFR-204ENST00000610543 DNMT1P26358 1616 aaKnown RBP21.93■■□□□ 1.1
CNTFR-204ENST00000610543 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
CNTFR-204ENST00000610543 DAPK1P53355 1430 aa21.9■■□□□ 1.1
CNTFR-204ENST00000610543 ROCK1Q13464 1354 aa21.88■■□□□ 1.09
CNTFR-204ENST00000610543 RRP7BPQ9NSQ0 103 aa21.88■■□□□ 1.09
CNTFR-204ENST00000610543 CHIC2Q9UKJ5 165 aa21.88■■□□□ 1.09
CNTFR-204ENST00000610543 ABCA8O94911 1581 aa21.87■■□□□ 1.09
CNTFR-204ENST00000610543 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
CNTFR-204ENST00000610543 PRG4Q92954 1404 aaPredicted RBP21.85■■□□□ 1.09
CNTFR-204ENST00000610543 PPP1R15AO75807 674 aaPredicted RBP21.84■■□□□ 1.09
CNTFR-204ENST00000610543 YTHDC1Q96MU7 727 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms