RNA–Protein interactions for RNA: ENST00000609883.1

RTL5-202, Transcript of retrotransposon Gag like 5, humanhuman

APPRIS P1 BASIC

Gene RTL5, Length 4,105 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL5-202ENST00000609883 CANXP27824 592 aaKnown RBP18.31■□□□□ 0.52
RTL5-202ENST00000609883 ANP32EQ9BTT0 268 aa18.3■□□□□ 0.52
RTL5-202ENST00000609883 CEP164Q9UPV0 1460 aa18.28■□□□□ 0.52
RTL5-202ENST00000609883 B4GALNT3Q6L9W6 998 aa18.24■□□□□ 0.51
RTL5-202ENST00000609883 SENP3Q9H4L4 574 aaPredicted RBP18.23■□□□□ 0.51
RTL5-202ENST00000609883 ZBTB47Q9UFB7 747 aaPredicted RBP18.23■□□□□ 0.51
RTL5-202ENST00000609883 CCNB3Q8WWL7 1395 aa18.21■□□□□ 0.51
RTL5-202ENST00000609883 RUSC2Q8N2Y8 1516 aa18.21■□□□□ 0.51
RTL5-202ENST00000609883 RGL3Q3MIN7 710 aa18.21■□□□□ 0.51
RTL5-202ENST00000609883 EIF5BO60841 1220 aaKnown RBP18.2■□□□□ 0.5
RTL5-202ENST00000609883 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
RTL5-202ENST00000609883 ARXQ96QS3 562 aa18.19■□□□□ 0.5
RTL5-202ENST00000609883 FOXD1Q16676 465 aa18.17■□□□□ 0.5
RTL5-202ENST00000609883 TSHZ2Q9NRE2 1034 aa18.14■□□□□ 0.5
RTL5-202ENST00000609883 RBM19Q9Y4C8 960 aaKnown RBP18.14■□□□□ 0.5
RTL5-202ENST00000609883 KIF27Q86VH2 1401 aa18.14■□□□□ 0.49
RTL5-202ENST00000609883 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
RTL5-202ENST00000609883 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.49
RTL5-202ENST00000609883 BAZ1AQ9NRL2 1556 aaPredicted RBP18.14■□□□□ 0.49
RTL5-202ENST00000609883 WIZO95785 1651 aa18.11■□□□□ 0.49
RTL5-202ENST00000609883 TSPY4P0CV99 314 aa18.11■□□□□ 0.49
RTL5-202ENST00000609883 TSPY10P0CW01 314 aa18.11■□□□□ 0.49
RTL5-202ENST00000609883 NACADO15069 1562 aa18.09■□□□□ 0.49
RTL5-202ENST00000609883 SLC24A1O60721 1099 aa18.07■□□□□ 0.48
RTL5-202ENST00000609883 RAB3GAP2Q9H2M9 1393 aa18.06■□□□□ 0.48
RTL5-202ENST00000609883 RTN4Q9NQC3 1192 aaKnown RBP18.01■□□□□ 0.47
RTL5-202ENST00000609883 HSPA5P11021 654 aaKnown RBP18.01■□□□□ 0.47
RTL5-202ENST00000609883 LAS1LQ9Y4W2 734 aaKnown RBP18.01■□□□□ 0.47
RTL5-202ENST00000609883 PPP4R2Q9NY27 417 aa18■□□□□ 0.47
RTL5-202ENST00000609883 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
RTL5-202ENST00000609883 WDR43Q15061 677 aaKnown RBP eCLIP18■□□□□ 0.47
RTL5-202ENST00000609883 CARD11Q9BXL7 1154 aa18■□□□□ 0.47
RTL5-202ENST00000609883 CARMIL1Q5VZK9 1371 aa17.99■□□□□ 0.47
RTL5-202ENST00000609883 CFDP1Q9UEE9 299 aaPredicted RBP17.98■□□□□ 0.47
RTL5-202ENST00000609883 RAPGEF2Q9Y4G8 1499 aa17.98■□□□□ 0.47
RTL5-202ENST00000609883 PPP1R15AO75807 674 aaPredicted RBP17.97■□□□□ 0.47
RTL5-202ENST00000609883 CUX2O14529 1486 aa17.97■□□□□ 0.47
RTL5-202ENST00000609883 SETD5Q9C0A6 1442 aa17.97■□□□□ 0.47
RTL5-202ENST00000609883 DHX57Q6P158 1386 aaKnown RBP17.95■□□□□ 0.46
RTL5-202ENST00000609883 NEUROD2Q15784 382 aa17.92■□□□□ 0.46
RTL5-202ENST00000609883 CC2D1BQ5T0F9 858 aaKnown RBP17.92■□□□□ 0.46
RTL5-202ENST00000609883 CCER2I3L3R5 266 aa17.9■□□□□ 0.46
RTL5-202ENST00000609883 RGS3P49796 1198 aa17.89■□□□□ 0.45
RTL5-202ENST00000609883 HSP90AA1P07900 732 aaKnown RBP17.88■□□□□ 0.45
RTL5-202ENST00000609883 PLEKHD1A6NEE1 506 aa17.88■□□□□ 0.45
RTL5-202ENST00000609883 NEFMP07197 916 aa17.88■□□□□ 0.45
RTL5-202ENST00000609883 DCAF11Q8TEB1 546 aa17.87■□□□□ 0.45
RTL5-202ENST00000609883 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.86■□□□□ 0.45
RTL5-202ENST00000609883 NOP58Q9Y2X3 529 aaKnown RBP17.86■□□□□ 0.45
RTL5-202ENST00000609883 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
RTL5-202ENST00000609883 TNNT2P45379 298 aaPredicted RBP17.84■□□□□ 0.45
RTL5-202ENST00000609883 UPF2Q9HAU5 1272 aaKnown RBP17.84■□□□□ 0.45
RTL5-202ENST00000609883 L3MBTL2Q969R5 705 aa17.84■□□□□ 0.45
RTL5-202ENST00000609883 TIMELESSQ9UNS1 1208 aa17.82■□□□□ 0.44
RTL5-202ENST00000609883 DEKP35659 375 aaKnown RBP17.8■□□□□ 0.44
RTL5-202ENST00000609883 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
RTL5-202ENST00000609883 MPHOSPH9Q99550 1183 aa17.8■□□□□ 0.44
RTL5-202ENST00000609883 FHAD1B1AJZ9 1412 aa17.79■□□□□ 0.44
RTL5-202ENST00000609883 PKD2Q13563 968 aa17.77■□□□□ 0.44
RTL5-202ENST00000609883 KNSTRNQ9Y448 316 aa17.77■□□□□ 0.44
RTL5-202ENST00000609883 STAG3Q9UJ98 1225 aa17.76■□□□□ 0.43
RTL5-202ENST00000609883 FHOD3Q2V2M9 1422 aa17.75■□□□□ 0.43
RTL5-202ENST00000609883 FRAT1Q92837 279 aaPredicted RBP17.75■□□□□ 0.43
RTL5-202ENST00000609883 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
RTL5-202ENST00000609883 ARHGAP35Q9NRY4 1499 aa17.72■□□□□ 0.43
RTL5-202ENST00000609883 EIF4G1Q04637 1599 aaKnown RBP17.69■□□□□ 0.42
RTL5-202ENST00000609883 PPM1GO15355 546 aaPredicted RBP17.69■□□□□ 0.42
RTL5-202ENST00000609883 PLEKHG5O94827 1062 aa17.68■□□□□ 0.42
RTL5-202ENST00000609883 SPRYD3Q8NCJ5 442 aa17.62■□□□□ 0.41
RTL5-202ENST00000609883 DDRGK1Q96HY6 314 aa17.62■□□□□ 0.41
RTL5-202ENST00000609883 RCAN3Q9UKA8 241 aa17.62■□□□□ 0.41
RTL5-202ENST00000609883 PRKRIP1Q9H875 184 aaPredicted RBP17.61■□□□□ 0.41
RTL5-202ENST00000609883 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
RTL5-202ENST00000609883 PLIN1O60240 522 aa17.58■□□□□ 0.41
RTL5-202ENST00000609883 ANP32BQ92688 251 aaKnown RBP17.58■□□□□ 0.4
RTL5-202ENST00000609883 SAFB2Q14151 953 aaKnown RBP eCLIP17.57■□□□□ 0.4
RTL5-202ENST00000609883 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
RTL5-202ENST00000609883 TPRNQ4KMQ1 711 aa17.56■□□□□ 0.4
RTL5-202ENST00000609883 ST20-MTHFSA0A0A6YYL1 179 aa17.56■□□□□ 0.4
RTL5-202ENST00000609883 NUP155O75694 1391 aa17.56■□□□□ 0.4
RTL5-202ENST00000609883 NUDCQ9Y266 331 aa17.55■□□□□ 0.4
RTL5-202ENST00000609883 SLC4A3P48751 1232 aa17.54■□□□□ 0.4
RTL5-202ENST00000609883 BECN1Q14457 450 aa17.54■□□□□ 0.4
RTL5-202ENST00000609883 PHLDB1Q86UU1 1377 aa17.54■□□□□ 0.4
RTL5-202ENST00000609883 TMF1P82094 1093 aa17.53■□□□□ 0.4
RTL5-202ENST00000609883 FTSJ3Q8IY81 847 aaKnown RBP17.53■□□□□ 0.4
RTL5-202ENST00000609883 U2SURPO15042 1029 aaKnown RBP17.53■□□□□ 0.4
RTL5-202ENST00000609883 ESF1Q9H501 851 aaKnown RBP17.53■□□□□ 0.4
RTL5-202ENST00000609883 FMN1Q68DA7 1419 aa17.53■□□□□ 0.4
RTL5-202ENST00000609883 SMARCA4P51532 1647 aa17.52■□□□□ 0.4
RTL5-202ENST00000609883 HNRNPMP52272 730 aaKnown RBP eCLIP17.52■□□□□ 0.4
RTL5-202ENST00000609883 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
RTL5-202ENST00000609883 CCDC146Q8IYE0 955 aa17.5■□□□□ 0.39
RTL5-202ENST00000609883 SLKQ9H2G2 1235 aaPredicted RBP17.5■□□□□ 0.39
RTL5-202ENST00000609883 EXOC6Q8TAG9 804 aa17.49■□□□□ 0.39
RTL5-202ENST00000609883 ZNF644Q9H582 1327 aaPredicted RBP17.49■□□□□ 0.39
RTL5-202ENST00000609883 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.49■□□□□ 0.39
RTL5-202ENST00000609883 CDCA8Q53HL2 280 aa17.49■□□□□ 0.39
RTL5-202ENST00000609883 IGF1RP08069 1367 aa17.48■□□□□ 0.39
RTL5-202ENST00000609883 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms