RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 AQRO60306 1485 aaKnown RBP eCLIP17.52■□□□□ 0.4
LINC01278-204ENST00000609143 GRIN2BQ13224 1484 aa17.51■□□□□ 0.39
LINC01278-204ENST00000609143 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
LINC01278-204ENST00000609143 ZEB1P37275 1124 aaPredicted RBP17.49■□□□□ 0.39
LINC01278-204ENST00000609143 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
LINC01278-204ENST00000609143 ZNF608Q9ULD9 1512 aaPredicted RBP17.46■□□□□ 0.39
LINC01278-204ENST00000609143 MAP3K1Q13233 1512 aa17.43■□□□□ 0.38
LINC01278-204ENST00000609143 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
LINC01278-204ENST00000609143 FHOD3Q2V2M9 1422 aa17.42■□□□□ 0.38
LINC01278-204ENST00000609143 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
LINC01278-204ENST00000609143 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
LINC01278-204ENST00000609143 TIAM1Q13009 1591 aa17.4■□□□□ 0.38
LINC01278-204ENST00000609143 SAMD9Q5K651 1589 aa17.4■□□□□ 0.38
LINC01278-204ENST00000609143 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
LINC01278-204ENST00000609143 FMN1Q68DA7 1419 aa17.38■□□□□ 0.37
LINC01278-204ENST00000609143 FYCO1Q9BQS8 1478 aa17.38■□□□□ 0.37
LINC01278-204ENST00000609143 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
LINC01278-204ENST00000609143 CASKIN1Q8WXD9 1431 aa17.36■□□□□ 0.37
LINC01278-204ENST00000609143 IQGAP2Q13576 1575 aa17.35■□□□□ 0.37
LINC01278-204ENST00000609143 CFAP43Q8NDM7 1665 aa17.35■□□□□ 0.37
LINC01278-204ENST00000609143 MAGI1Q96QZ7 1491 aaPredicted RBP17.33■□□□□ 0.37
LINC01278-204ENST00000609143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
LINC01278-204ENST00000609143 CCER1Q8TC90 406 aaPredicted RBP17.33■□□□□ 0.36
LINC01278-204ENST00000609143 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
LINC01278-204ENST00000609143 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
LINC01278-204ENST00000609143 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
LINC01278-204ENST00000609143 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
LINC01278-204ENST00000609143 ATP1B4Q9UN42 357 aaPredicted RBP17.29■□□□□ 0.36
LINC01278-204ENST00000609143 KIAA0586Q9BVV6 1533 aa17.27■□□□□ 0.35
LINC01278-204ENST00000609143 SYNJ2O15056 1496 aa17.26■□□□□ 0.35
LINC01278-204ENST00000609143 UGGT2Q9NYU1 1516 aa17.26■□□□□ 0.35
LINC01278-204ENST00000609143 CCNB3Q8WWL7 1395 aa17.24■□□□□ 0.35
LINC01278-204ENST00000609143 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
LINC01278-204ENST00000609143 HECW1Q76N89 1606 aa17.17■□□□□ 0.34
LINC01278-204ENST00000609143 LRRIQ1Q96JM4 1722 aa17.17■□□□□ 0.34
LINC01278-204ENST00000609143 CEP170Q5SW79 1584 aa17.17■□□□□ 0.34
LINC01278-204ENST00000609143 KIAA0556O60303 1618 aa17.17■□□□□ 0.34
LINC01278-204ENST00000609143 CCDC18Q5T9S5 1454 aa17.16■□□□□ 0.34
LINC01278-204ENST00000609143 PHLDB1Q86UU1 1377 aa17.16■□□□□ 0.34
LINC01278-204ENST00000609143 FBLN2P98095 1184 aa17.16■□□□□ 0.34
LINC01278-204ENST00000609143 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
LINC01278-204ENST00000609143 DISP1Q96F81 1524 aa17.14■□□□□ 0.34
LINC01278-204ENST00000609143 NUP160Q12769 1436 aa17.14■□□□□ 0.33
LINC01278-204ENST00000609143 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
LINC01278-204ENST00000609143 EPRSP07814 1512 aaKnown RBP17.08■□□□□ 0.33
LINC01278-204ENST00000609143 SUPT6HQ7KZ85 1726 aaKnown RBP17.08■□□□□ 0.33
LINC01278-204ENST00000609143 CARMIL2Q6F5E8 1435 aa17.06■□□□□ 0.32
LINC01278-204ENST00000609143 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.32
LINC01278-204ENST00000609143 ITGAEP38570 1179 aa17.06■□□□□ 0.32
LINC01278-204ENST00000609143 FAM50AQ14320 339 aaKnown RBP17.05■□□□□ 0.32
LINC01278-204ENST00000609143 NCOA2Q15596 1464 aa17.05■□□□□ 0.32
LINC01278-204ENST00000609143 RAPGEF6Q8TEU7 1601 aa17.04■□□□□ 0.32
LINC01278-204ENST00000609143 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
LINC01278-204ENST00000609143 JPH4Q96JJ6 628 aa17.03■□□□□ 0.32
LINC01278-204ENST00000609143 MAGI3Q5TCQ9 1506 aa17.03■□□□□ 0.32
LINC01278-204ENST00000609143 CDK13Q14004 1512 aaKnown RBP17.02■□□□□ 0.32
LINC01278-204ENST00000609143 MYOM3Q5VTT5 1437 aa17.01■□□□□ 0.31
LINC01278-204ENST00000609143 ARHGEF11O15085 1522 aa17■□□□□ 0.31
LINC01278-204ENST00000609143 CHD1O14646 1710 aa17■□□□□ 0.31
LINC01278-204ENST00000609143 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
LINC01278-204ENST00000609143 CLSPNQ9HAW4 1339 aa16.99■□□□□ 0.31
LINC01278-204ENST00000609143 DHX57Q6P158 1386 aaKnown RBP16.98■□□□□ 0.31
LINC01278-204ENST00000609143 SETD5Q9C0A6 1442 aa16.95■□□□□ 0.3
LINC01278-204ENST00000609143 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
LINC01278-204ENST00000609143 RAB3GAP2Q9H2M9 1393 aa16.94■□□□□ 0.3
LINC01278-204ENST00000609143 CDK11AQ9UQ88 783 aaPredicted RBP16.94■□□□□ 0.3
LINC01278-204ENST00000609143 PLB1Q6P1J6 1458 aa16.93■□□□□ 0.3
LINC01278-204ENST00000609143 PTPN23Q9H3S7 1636 aa16.93■□□□□ 0.3
LINC01278-204ENST00000609143 PRG4Q92954 1404 aaPredicted RBP16.91■□□□□ 0.3
LINC01278-204ENST00000609143 PELP1Q8IZL8 1130 aaKnown RBP16.89■□□□□ 0.3
LINC01278-204ENST00000609143 MIA2Q96PC5 1412 aa16.89■□□□□ 0.29
LINC01278-204ENST00000609143 TCOF1Q13428 1488 aaKnown RBP16.89■□□□□ 0.29
LINC01278-204ENST00000609143 ABCA8O94911 1581 aa16.89■□□□□ 0.29
LINC01278-204ENST00000609143 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
LINC01278-204ENST00000609143 TROQ12816 1431 aaPredicted RBP16.86■□□□□ 0.29
LINC01278-204ENST00000609143 PTPRGP23470 1445 aa16.84■□□□□ 0.29
LINC01278-204ENST00000609143 HFM1A2PYH4 1435 aa16.83■□□□□ 0.28
LINC01278-204ENST00000609143 PTPRKQ15262 1439 aa16.83■□□□□ 0.28
LINC01278-204ENST00000609143 ADCY10Q96PN6 1610 aa16.82■□□□□ 0.28
LINC01278-204ENST00000609143 ATP10BO94823 1461 aa16.79■□□□□ 0.28
LINC01278-204ENST00000609143 ITSN2Q9NZM3 1697 aa16.79■□□□□ 0.28
LINC01278-204ENST00000609143 CLASP1Q7Z460 1538 aa16.79■□□□□ 0.28
LINC01278-204ENST00000609143 MAPKBP1O60336 1514 aa16.78■□□□□ 0.28
LINC01278-204ENST00000609143 PLEKHD1A6NEE1 506 aa16.77■□□□□ 0.27
LINC01278-204ENST00000609143 NAIPQ13075 1403 aa16.76■□□□□ 0.27
LINC01278-204ENST00000609143 KIF14Q15058 1648 aa16.76■□□□□ 0.27
LINC01278-204ENST00000609143 AKNAQ7Z591 1439 aa16.76■□□□□ 0.27
LINC01278-204ENST00000609143 UACAQ9BZF9 1416 aa16.75■□□□□ 0.27
LINC01278-204ENST00000609143 GCC2Q8IWJ2 1684 aa16.74■□□□□ 0.27
LINC01278-204ENST00000609143 DNMT1P26358 1616 aaKnown RBP16.73■□□□□ 0.27
LINC01278-204ENST00000609143 ERCC6L2Q5T890 1561 aa16.73■□□□□ 0.27
LINC01278-204ENST00000609143 GPATCH8Q9UKJ3 1502 aaKnown RBP16.73■□□□□ 0.27
LINC01278-204ENST00000609143 ZNF316A6NFI3 1004 aaPredicted RBP16.72■□□□□ 0.27
LINC01278-204ENST00000609143 DAPK1P53355 1430 aa16.71■□□□□ 0.27
LINC01278-204ENST00000609143 CFDP1Q9UEE9 299 aaPredicted RBP16.71■□□□□ 0.27
LINC01278-204ENST00000609143 CHIC2Q9UKJ5 165 aa16.7■□□□□ 0.26
LINC01278-204ENST00000609143 ABCC2Q92887 1545 aa16.69■□□□□ 0.26
LINC01278-204ENST00000609143 CAMSAP2Q08AD1 1489 aa16.69■□□□□ 0.26
LINC01278-204ENST00000609143 ABCC10Q5T3U5 1492 aa16.68■□□□□ 0.26
LINC01278-204ENST00000609143 RRP7BPQ9NSQ0 103 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms