RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 ABCC10Q5T3U5 1492 aa24.01■■□□□ 1.43
CTSA-218ENST00000607814 NPM1P06748 294 aaKnown RBP eCLIP23.99■■□□□ 1.43
CTSA-218ENST00000607814 MAPKBP1O60336 1514 aa23.99■■□□□ 1.43
CTSA-218ENST00000607814 FAM69CQ0P6D2 419 aa23.98■■□□□ 1.43
CTSA-218ENST00000607814 RUSC2Q8N2Y8 1516 aa23.95■■□□□ 1.43
CTSA-218ENST00000607814 DIP2BQ9P265 1576 aa23.91■■□□□ 1.42
CTSA-218ENST00000607814 ADCY10Q96PN6 1610 aa23.87■■□□□ 1.41
CTSA-218ENST00000607814 KIAA0586Q9BVV6 1533 aa23.83■■□□□ 1.41
CTSA-218ENST00000607814 KDM6BO15054 1643 aa23.82■■□□□ 1.4
CTSA-218ENST00000607814 KDM4FA0A1W2PPD8 638 aa23.77■■□□□ 1.4
CTSA-218ENST00000607814 IGF1RP08069 1367 aa23.72■■□□□ 1.39
CTSA-218ENST00000607814 CUL7Q14999 1698 aa23.71■■□□□ 1.39
CTSA-218ENST00000607814 TSPOAP1O95153 1857 aa23.68■■□□□ 1.38
CTSA-218ENST00000607814 KIF27Q86VH2 1401 aa23.68■■□□□ 1.38
CTSA-218ENST00000607814 PTPRGP23470 1445 aa23.67■■□□□ 1.38
CTSA-218ENST00000607814 ABCC2Q92887 1545 aa23.63■■□□□ 1.37
CTSA-218ENST00000607814 CARMIL2Q6F5E8 1435 aa23.61■■□□□ 1.37
CTSA-218ENST00000607814 PLB1Q6P1J6 1458 aa23.61■■□□□ 1.37
CTSA-218ENST00000607814 TNIKQ9UKE5 1360 aa23.6■■□□□ 1.37
CTSA-218ENST00000607814 GLI2P10070 1586 aa23.6■■□□□ 1.37
CTSA-218ENST00000607814 ASXL2Q76L83 1435 aa23.57■■□□□ 1.36
CTSA-218ENST00000607814 UHRF1BP1LA0JNW5 1464 aa23.56■■□□□ 1.36
CTSA-218ENST00000607814 CARMIL1Q5VZK9 1371 aa23.54■■□□□ 1.36
CTSA-218ENST00000607814 PPRC1Q5VV67 1664 aaKnown RBP23.52■■□□□ 1.36
CTSA-218ENST00000607814 ILDR1Q86SU0 546 aaPredicted RBP23.5■■□□□ 1.35
CTSA-218ENST00000607814 IQGAP2Q13576 1575 aa23.49■■□□□ 1.35
CTSA-218ENST00000607814 UACAQ9BZF9 1416 aa23.49■■□□□ 1.35
CTSA-218ENST00000607814 ADGRL1O94910 1474 aa23.48■■□□□ 1.35
CTSA-218ENST00000607814 TTBK1Q5TCY1 1321 aaPredicted RBP23.47■■□□□ 1.35
CTSA-218ENST00000607814 KDM5BQ9UGL1 1544 aa23.43■■□□□ 1.34
CTSA-218ENST00000607814 TEX14Q8IWB6 1497 aa23.43■■□□□ 1.34
CTSA-218ENST00000607814 EPRSP07814 1512 aaKnown RBP23.43■■□□□ 1.34
CTSA-218ENST00000607814 DISP1Q96F81 1524 aa23.42■■□□□ 1.34
CTSA-218ENST00000607814 MAP3K4Q9Y6R4 1608 aa23.41■■□□□ 1.34
CTSA-218ENST00000607814 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
CTSA-218ENST00000607814 UGGT2Q9NYU1 1516 aa23.35■■□□□ 1.33
CTSA-218ENST00000607814 ZCCHC11Q5TAX3 1644 aaKnown RBP23.32■■□□□ 1.32
CTSA-218ENST00000607814 HECW2Q9P2P5 1572 aa23.3■■□□□ 1.32
CTSA-218ENST00000607814 RAPGEF2Q9Y4G8 1499 aa23.29■■□□□ 1.32
CTSA-218ENST00000607814 KIAA0556O60303 1618 aa23.28■■□□□ 1.32
CTSA-218ENST00000607814 WDR7Q9Y4E6 1490 aa23.27■■□□□ 1.32
CTSA-218ENST00000607814 MAGI3Q5TCQ9 1506 aa23.22■■□□□ 1.31
CTSA-218ENST00000607814 CFAP43Q8NDM7 1665 aa23.18■■□□□ 1.3
CTSA-218ENST00000607814 CD109Q6YHK3 1445 aa23.17■■□□□ 1.3
CTSA-218ENST00000607814 GOLGA3Q08378 1498 aa23.15■■□□□ 1.3
CTSA-218ENST00000607814 ABCA8O94911 1581 aa23.11■■□□□ 1.29
CTSA-218ENST00000607814 CTTNBP2Q8WZ74 1663 aa23.09■■□□□ 1.29
CTSA-218ENST00000607814 KCNH8Q96L42 1107 aa23.07■■□□□ 1.28
CTSA-218ENST00000607814 ARAP3Q8WWN8 1544 aa23.05■■□□□ 1.28
CTSA-218ENST00000607814 PHLDB1Q86UU1 1377 aa23.01■■□□□ 1.27
CTSA-218ENST00000607814 KIF21BO75037 1637 aa23.01■■□□□ 1.27
CTSA-218ENST00000607814 FAM9AQ8IZU1 332 aaPredicted RBP23■■□□□ 1.27
CTSA-218ENST00000607814 FBXO41Q8TF61 875 aa22.99■■□□□ 1.27
CTSA-218ENST00000607814 PRXQ9BXM0 1461 aa22.94■■□□□ 1.26
CTSA-218ENST00000607814 ATP10BO94823 1461 aa22.92■■□□□ 1.26
CTSA-218ENST00000607814 PTPRMP28827 1452 aa22.92■■□□□ 1.26
CTSA-218ENST00000607814 ADAMTSL3P82987 1691 aa22.91■■□□□ 1.26
CTSA-218ENST00000607814 ABCA9Q8IUA7 1624 aa22.9■■□□□ 1.26
CTSA-218ENST00000607814 NEO1Q92859 1461 aa22.88■■□□□ 1.25
CTSA-218ENST00000607814 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.25
CTSA-218ENST00000607814 RAPGEF3O95398 923 aa22.82■■□□□ 1.24
CTSA-218ENST00000607814 BCORL1Q5H9F3 1711 aa22.8■■□□□ 1.24
CTSA-218ENST00000607814 ARID3CA6NKF2 412 aa22.8■■□□□ 1.24
CTSA-218ENST00000607814 CSRNP3Q8WYN3 585 aa22.8■■□□□ 1.24
CTSA-218ENST00000607814 PCF11O94913 1555 aaKnown RBP22.79■■□□□ 1.24
CTSA-218ENST00000607814 SAMD9Q5K651 1589 aa22.76■■□□□ 1.23
CTSA-218ENST00000607814 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
CTSA-218ENST00000607814 FRMPD1Q5SYB0 1578 aa22.76■■□□□ 1.23
CTSA-218ENST00000607814 RAPGEF6Q8TEU7 1601 aa22.75■■□□□ 1.23
CTSA-218ENST00000607814 ARID4BQ4LE39 1312 aaPredicted RBP22.75■■□□□ 1.23
CTSA-218ENST00000607814 MADDQ8WXG6 1647 aa22.75■■□□□ 1.23
CTSA-218ENST00000607814 LMTK3Q96Q04 1460 aa22.74■■□□□ 1.23
CTSA-218ENST00000607814 EHMT2Q96KQ7 1210 aa22.71■■□□□ 1.23
CTSA-218ENST00000607814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.7■■□□□ 1.22
CTSA-218ENST00000607814 HNRNPUL2Q1KMD3 747 aaKnown RBP22.7■■□□□ 1.22
CTSA-218ENST00000607814 ARHGEF40Q8TER5 1519 aa22.7■■□□□ 1.22
CTSA-218ENST00000607814 DENND4BO75064 1496 aaPredicted RBP22.68■■□□□ 1.22
CTSA-218ENST00000607814 NUP153P49790 1475 aaKnown RBP22.67■■□□□ 1.22
CTSA-218ENST00000607814 FHOD3Q2V2M9 1422 aa22.66■■□□□ 1.22
CTSA-218ENST00000607814 RICTORQ6R327 1708 aa22.65■■□□□ 1.22
CTSA-218ENST00000607814 POGZQ7Z3K3 1410 aa22.65■■□□□ 1.22
CTSA-218ENST00000607814 CFAP74Q9C0B2 1584 aa22.64■■□□□ 1.22
CTSA-218ENST00000607814 RANGAP1P46060 587 aaPredicted RBP22.64■■□□□ 1.21
CTSA-218ENST00000607814 RIMS1Q86UR5 1692 aaKnown RBP22.64■■□□□ 1.21
CTSA-218ENST00000607814 AKNAQ7Z591 1439 aa22.64■■□□□ 1.21
CTSA-218ENST00000607814 PLEKHD1A6NEE1 506 aa22.63■■□□□ 1.21
CTSA-218ENST00000607814 FANCAO15360 1455 aa22.62■■□□□ 1.21
CTSA-218ENST00000607814 ZMYM4Q5VZL5 1548 aa22.61■■□□□ 1.21
CTSA-218ENST00000607814 EEA1Q15075 1411 aa22.6■■□□□ 1.21
CTSA-218ENST00000607814 MAGI2Q86UL8 1455 aa22.6■■□□□ 1.21
CTSA-218ENST00000607814 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
CTSA-218ENST00000607814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.56■■□□□ 1.2
CTSA-218ENST00000607814 ZFYVE16Q7Z3T8 1539 aa22.55■■□□□ 1.2
CTSA-218ENST00000607814 HSPA2P54652 639 aa22.54■■□□□ 1.2
CTSA-218ENST00000607814 CERKQ8TCT0 537 aa22.51■■□□□ 1.19
CTSA-218ENST00000607814 YEATS2Q9ULM3 1422 aa22.5■■□□□ 1.19
CTSA-218ENST00000607814 TTC37Q6PGP7 1564 aa22.5■■□□□ 1.19
CTSA-218ENST00000607814 SIGLEC1Q9BZZ2 1709 aa22.47■■□□□ 1.19
CTSA-218ENST00000607814 HECW1Q76N89 1606 aa22.46■■□□□ 1.19
CTSA-218ENST00000607814 FER1L4A9Z1Z3 1794 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms