RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 NPM1P06748 294 aaKnown RBP eCLIP26.86■■□□□ 1.89
SSBP4-214ENST00000607020 ABCC10Q5T3U5 1492 aa26.86■■□□□ 1.89
SSBP4-214ENST00000607020 KIF13AQ9H1H9 1805 aa26.79■■□□□ 1.88
SSBP4-214ENST00000607020 MAPKBP1O60336 1514 aa26.77■■□□□ 1.88
SSBP4-214ENST00000607020 RUSC2Q8N2Y8 1516 aa26.72■■□□□ 1.87
SSBP4-214ENST00000607020 KIAA0586Q9BVV6 1533 aa26.7■■□□□ 1.87
SSBP4-214ENST00000607020 IGF1RP08069 1367 aa26.7■■□□□ 1.86
SSBP4-214ENST00000607020 DIP2BQ9P265 1576 aa26.65■■□□□ 1.86
SSBP4-214ENST00000607020 KDM4FA0A1W2PPD8 638 aa26.64■■□□□ 1.86
SSBP4-214ENST00000607020 ADCY10Q96PN6 1610 aa26.63■■□□□ 1.85
SSBP4-214ENST00000607020 KIF27Q86VH2 1401 aa26.57■■□□□ 1.84
SSBP4-214ENST00000607020 PTPRGP23470 1445 aa26.56■■□□□ 1.84
SSBP4-214ENST00000607020 KDM6BO15054 1643 aa26.5■■□□□ 1.83
SSBP4-214ENST00000607020 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
SSBP4-214ENST00000607020 TNIKQ9UKE5 1360 aa26.46■■□□□ 1.83
SSBP4-214ENST00000607020 CARMIL2Q6F5E8 1435 aa26.44■■□□□ 1.82
SSBP4-214ENST00000607020 CUL7Q14999 1698 aa26.44■■□□□ 1.82
SSBP4-214ENST00000607020 ABCC2Q92887 1545 aa26.43■■□□□ 1.82
SSBP4-214ENST00000607020 PLB1Q6P1J6 1458 aa26.41■■□□□ 1.82
SSBP4-214ENST00000607020 ASXL2Q76L83 1435 aa26.39■■□□□ 1.81
SSBP4-214ENST00000607020 UHRF1BP1LA0JNW5 1464 aa26.37■■□□□ 1.81
SSBP4-214ENST00000607020 GLI2P10070 1586 aa26.35■■□□□ 1.81
SSBP4-214ENST00000607020 TTBK1Q5TCY1 1321 aaPredicted RBP26.35■■□□□ 1.81
SSBP4-214ENST00000607020 UACAQ9BZF9 1416 aa26.32■■□□□ 1.8
SSBP4-214ENST00000607020 TSPOAP1O95153 1857 aa26.29■■□□□ 1.8
SSBP4-214ENST00000607020 ILDR1Q86SU0 546 aaPredicted RBP26.25■■□□□ 1.79
SSBP4-214ENST00000607020 IQGAP2Q13576 1575 aa26.24■■□□□ 1.79
SSBP4-214ENST00000607020 DISP1Q96F81 1524 aa26.24■■□□□ 1.79
SSBP4-214ENST00000607020 KDM5BQ9UGL1 1544 aa26.24■■□□□ 1.79
SSBP4-214ENST00000607020 COL17A1Q9UMD9 1497 aaPredicted RBP26.23■■□□□ 1.79
SSBP4-214ENST00000607020 EPRSP07814 1512 aaKnown RBP26.22■■□□□ 1.79
SSBP4-214ENST00000607020 PPRC1Q5VV67 1664 aaKnown RBP26.2■■□□□ 1.78
SSBP4-214ENST00000607020 ADGRL1O94910 1474 aa26.19■■□□□ 1.78
SSBP4-214ENST00000607020 TEX14Q8IWB6 1497 aa26.16■■□□□ 1.78
SSBP4-214ENST00000607020 UGGT2Q9NYU1 1516 aa26.15■■□□□ 1.78
SSBP4-214ENST00000607020 RAPGEF2Q9Y4G8 1499 aa26.12■■□□□ 1.77
SSBP4-214ENST00000607020 MAP3K4Q9Y6R4 1608 aa26.09■■□□□ 1.77
SSBP4-214ENST00000607020 WDR7Q9Y4E6 1490 aa26.04■■□□□ 1.76
SSBP4-214ENST00000607020 KIAA0556O60303 1618 aa26■■□□□ 1.75
SSBP4-214ENST00000607020 ZCCHC11Q5TAX3 1644 aaKnown RBP26■■□□□ 1.75
SSBP4-214ENST00000607020 MAGI3Q5TCQ9 1506 aa25.98■■□□□ 1.75
SSBP4-214ENST00000607020 CD109Q6YHK3 1445 aa25.97■■□□□ 1.75
SSBP4-214ENST00000607020 HECW2Q9P2P5 1572 aa25.93■■□□□ 1.74
SSBP4-214ENST00000607020 KCNH8Q96L42 1107 aa25.92■■□□□ 1.74
SSBP4-214ENST00000607020 GOLGA3Q08378 1498 aa25.91■■□□□ 1.74
SSBP4-214ENST00000607020 ABCA8O94911 1581 aa25.86■■□□□ 1.73
SSBP4-214ENST00000607020 CFAP43Q8NDM7 1665 aa25.8■■□□□ 1.72
SSBP4-214ENST00000607020 ARAP3Q8WWN8 1544 aa25.79■■□□□ 1.72
SSBP4-214ENST00000607020 PHLDB1Q86UU1 1377 aa25.78■■□□□ 1.72
SSBP4-214ENST00000607020 PRXQ9BXM0 1461 aa25.78■■□□□ 1.72
SSBP4-214ENST00000607020 FAM9AQ8IZU1 332 aaPredicted RBP25.76■■□□□ 1.71
SSBP4-214ENST00000607020 ATP10BO94823 1461 aa25.72■■□□□ 1.71
SSBP4-214ENST00000607020 FBXO41Q8TF61 875 aa25.68■■□□□ 1.7
SSBP4-214ENST00000607020 CTTNBP2Q8WZ74 1663 aa25.68■■□□□ 1.7
SSBP4-214ENST00000607020 ARID3CA6NKF2 412 aa25.63■■□□□ 1.69
SSBP4-214ENST00000607020 RAPGEF3O95398 923 aa25.62■■□□□ 1.69
SSBP4-214ENST00000607020 P3H3Q8IVL6 736 aa25.62■■□□□ 1.69
SSBP4-214ENST00000607020 PTPRMP28827 1452 aa25.6■■□□□ 1.69
SSBP4-214ENST00000607020 NEO1Q92859 1461 aa25.6■■□□□ 1.69
SSBP4-214ENST00000607020 KIF21BO75037 1637 aa25.59■■□□□ 1.69
SSBP4-214ENST00000607020 ABCA9Q8IUA7 1624 aa25.57■■□□□ 1.68
SSBP4-214ENST00000607020 ADAMTSL3P82987 1691 aa25.53■■□□□ 1.68
SSBP4-214ENST00000607020 CSRNP3Q8WYN3 585 aa25.5■■□□□ 1.67
SSBP4-214ENST00000607020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.48■■□□□ 1.67
SSBP4-214ENST00000607020 HNRNPUL2Q1KMD3 747 aaKnown RBP25.48■■□□□ 1.67
SSBP4-214ENST00000607020 ARID4BQ4LE39 1312 aaPredicted RBP25.47■■□□□ 1.67
SSBP4-214ENST00000607020 SAMD9Q5K651 1589 aa25.44■■□□□ 1.66
SSBP4-214ENST00000607020 PLEKHD1A6NEE1 506 aa25.43■■□□□ 1.66
SSBP4-214ENST00000607020 NUP153P49790 1475 aaKnown RBP25.42■■□□□ 1.66
SSBP4-214ENST00000607020 RAPGEF6Q8TEU7 1601 aa25.41■■□□□ 1.66
SSBP4-214ENST00000607020 FRMPD1Q5SYB0 1578 aa25.41■■□□□ 1.66
SSBP4-214ENST00000607020 LMTK3Q96Q04 1460 aa25.4■■□□□ 1.66
SSBP4-214ENST00000607020 FHOD3Q2V2M9 1422 aa25.4■■□□□ 1.66
SSBP4-214ENST00000607020 DENND4BO75064 1496 aaPredicted RBP25.4■■□□□ 1.66
SSBP4-214ENST00000607020 PCF11O94913 1555 aaKnown RBP25.39■■□□□ 1.66
SSBP4-214ENST00000607020 BCORL1Q5H9F3 1711 aa25.39■■□□□ 1.65
SSBP4-214ENST00000607020 AKNAQ7Z591 1439 aa25.37■■□□□ 1.65
SSBP4-214ENST00000607020 MADDQ8WXG6 1647 aa25.34■■□□□ 1.65
SSBP4-214ENST00000607020 POGZQ7Z3K3 1410 aa25.31■■□□□ 1.64
SSBP4-214ENST00000607020 ARHGEF40Q8TER5 1519 aa25.31■■□□□ 1.64
SSBP4-214ENST00000607020 FANCAO15360 1455 aa25.3■■□□□ 1.64
SSBP4-214ENST00000607020 EEA1Q15075 1411 aa25.27■■□□□ 1.64
SSBP4-214ENST00000607020 MAGI2Q86UL8 1455 aa25.27■■□□□ 1.64
SSBP4-214ENST00000607020 HSPA2P54652 639 aa25.26■■□□□ 1.63
SSBP4-214ENST00000607020 ZMYM4Q5VZL5 1548 aa25.24■■□□□ 1.63
SSBP4-214ENST00000607020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.24■■□□□ 1.631e-6■■□□□ 13.7
SSBP4-214ENST00000607020 RANGAP1P46060 587 aaPredicted RBP25.24■■□□□ 1.63
SSBP4-214ENST00000607020 YEATS2Q9ULM3 1422 aa25.22■■□□□ 1.63
SSBP4-214ENST00000607020 RICTORQ6R327 1708 aa25.21■■□□□ 1.63
SSBP4-214ENST00000607020 CERKQ8TCT0 537 aa25.2■■□□□ 1.62
SSBP4-214ENST00000607020 PLCH2O75038 1416 aa25.19■■□□□ 1.62
SSBP4-214ENST00000607020 CFAP74Q9C0B2 1584 aa25.18■■□□□ 1.62
SSBP4-214ENST00000607020 EFCAB5A4FU69 1503 aa25.18■■□□□ 1.62
SSBP4-214ENST00000607020 ZFYVE16Q7Z3T8 1539 aa25.18■■□□□ 1.62
SSBP4-214ENST00000607020 RIMS1Q86UR5 1692 aaKnown RBP25.17■■□□□ 1.62
SSBP4-214ENST00000607020 SCAPERQ9BY12 1400 aa25.16■■□□□ 1.62
SSBP4-214ENST00000607020 MLECQ14165 292 aa25.14■■□□□ 1.62
SSBP4-214ENST00000607020 PLPPR3Q6T4P5 718 aa25.14■■□□□ 1.62
SSBP4-214ENST00000607020 EFCAB2Q5VUJ9 269 aa25.12■■□□□ 1.61
SSBP4-214ENST00000607020 TTC37Q6PGP7 1564 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms