RNA–Protein interactions for RNA: ENST00000606570.1

SNX5-218, Transcript of sorting nexin 5, humanhuman

Gene SNX5, Length 3,931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-218ENST00000606570 HNRNPUL2Q1KMD3 747 aaKnown RBP9.67□□□□□ -0.86
SNX5-218ENST00000606570 UBTFP17480 764 aaKnown RBP9.67□□□□□ -0.86
SNX5-218ENST00000606570 POLR3GLQ9BT43 218 aa9.67□□□□□ -0.86
SNX5-218ENST00000606570 ABCC9O60706 1549 aa9.66□□□□□ -0.86
SNX5-218ENST00000606570 PLCB2Q00722 1185 aa9.66□□□□□ -0.86
SNX5-218ENST00000606570 NAP1L2Q9ULW6 460 aaPredicted RBP9.66□□□□□ -0.86
SNX5-218ENST00000606570 MIER1Q8N108 512 aa9.65□□□□□ -0.86
SNX5-218ENST00000606570 RBM19Q9Y4C8 960 aaKnown RBP9.65□□□□□ -0.86
SNX5-218ENST00000606570 ZBTB22O15209 634 aa9.64□□□□□ -0.87
SNX5-218ENST00000606570 CNKSR2Q8WXI2 1034 aa9.62□□□□□ -0.87
SNX5-218ENST00000606570 CHMP4BQ9H444 224 aaKnown RBP9.62□□□□□ -0.87
SNX5-218ENST00000606570 MSH5O43196 834 aa9.61□□□□□ -0.87
SNX5-218ENST00000606570 FBXO3Q9UK99 471 aa9.61□□□□□ -0.87
SNX5-218ENST00000606570 SCRIBQ14160 1630 aa9.6□□□□□ -0.87
SNX5-218ENST00000606570 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
SNX5-218ENST00000606570 HSP90B1P14625 803 aaKnown RBP9.56□□□□□ -0.88
SNX5-218ENST00000606570 RSF1Q96T23 1441 aaPredicted RBP9.55□□□□□ -0.88
SNX5-218ENST00000606570 NBR1Q14596 966 aa9.54□□□□□ -0.88
SNX5-218ENST00000606570 ZFP91Q96JP5 570 aaPredicted RBP9.53□□□□□ -0.88
SNX5-218ENST00000606570 CFAP44Q96MT7 982 aa9.53□□□□□ -0.88
SNX5-218ENST00000606570 BCCIPQ9P287 314 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNX5-218ENST00000606570 RTL5Q5HYW3 569 aaPredicted RBP9.52□□□□□ -0.89
SNX5-218ENST00000606570 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.52□□□□□ -0.89
SNX5-218ENST00000606570 FKBP8Q14318 412 aa9.5□□□□□ -0.89
SNX5-218ENST00000606570 IPO4Q8TEX9 1081 aaKnown RBP9.48□□□□□ -0.89
SNX5-218ENST00000606570 CANXP27824 592 aaKnown RBP9.46□□□□□ -0.89
SNX5-218ENST00000606570 HSP90AA2PQ14568 343 aaPredicted RBP9.45□□□□□ -0.9
SNX5-218ENST00000606570 RB1CC1Q8TDY2 1594 aa9.45□□□□□ -0.9
SNX5-218ENST00000606570 CNPY4Q8N129 248 aa9.45□□□□□ -0.9
SNX5-218ENST00000606570 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
SNX5-218ENST00000606570 SECISBP2LQ93073 1101 aaKnown RBP9.44□□□□□ -0.9
SNX5-218ENST00000606570 CNGB1Q14028 1251 aaPredicted RBP9.43□□□□□ -0.9
SNX5-218ENST00000606570 FANCIQ9NVI1 1328 aa9.43□□□□□ -0.9
SNX5-218ENST00000606570 CCDC9Q9Y3X0 531 aaKnown RBP9.42□□□□□ -0.9
SNX5-218ENST00000606570 NCLP19338 710 aaKnown RBP9.41□□□□□ -0.9
SNX5-218ENST00000606570 CEP162Q5TB80 1403 aa9.41□□□□□ -0.9
SNX5-218ENST00000606570 TMEM132AQ24JP5 1023 aa9.4□□□□□ -0.9
SNX5-218ENST00000606570 NACADO15069 1562 aa9.4□□□□□ -0.9
SNX5-218ENST00000606570 IGSF3O75054 1194 aa9.4□□□□□ -0.9
SNX5-218ENST00000606570 GTF2E1P29083 439 aaPredicted RBP9.39□□□□□ -0.91
SNX5-218ENST00000606570 ITGAEP38570 1179 aa9.39□□□□□ -0.91
SNX5-218ENST00000606570 FTSJ3Q8IY81 847 aaKnown RBP9.39□□□□□ -0.91
SNX5-218ENST00000606570 TEX2Q8IWB9 1127 aa9.38□□□□□ -0.91
SNX5-218ENST00000606570 WWC1Q8IX03 1113 aa9.38□□□□□ -0.91
SNX5-218ENST00000606570 UNC13AQ9UPW8 1703 aa9.37□□□□□ -0.91
SNX5-218ENST00000606570 PLCD3Q8N3E9 789 aa9.37□□□□□ -0.91
SNX5-218ENST00000606570 BRPF3Q9ULD4 1205 aa9.37□□□□□ -0.91
SNX5-218ENST00000606570 CECR2Q9BXF3 1484 aa9.36□□□□□ -0.91
SNX5-218ENST00000606570 RRP9O43818 475 aaKnown RBP9.36□□□□□ -0.91
SNX5-218ENST00000606570 FBLN2P98095 1184 aa9.35□□□□□ -0.91
SNX5-218ENST00000606570 PPP6R1Q9UPN7 881 aa9.35□□□□□ -0.91
SNX5-218ENST00000606570 RGS3P49796 1198 aa9.35□□□□□ -0.91
SNX5-218ENST00000606570 STAC3Q96MF2 364 aa9.34□□□□□ -0.91
SNX5-218ENST00000606570 USP35Q9P2H5 1018 aa9.33□□□□□ -0.92
SNX5-218ENST00000606570 NPM3O75607 178 aaKnown RBP9.33□□□□□ -0.92
SNX5-218ENST00000606570 KDM2AQ9Y2K7 1162 aa9.32□□□□□ -0.92
SNX5-218ENST00000606570 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.31□□□□□ -0.92
SNX5-218ENST00000606570 TNIKQ9UKE5 1360 aa9.3□□□□□ -0.92
SNX5-218ENST00000606570 HSP90AA1P07900 732 aaKnown RBP9.3□□□□□ -0.92
SNX5-218ENST00000606570 FOXD1Q16676 465 aa9.3□□□□□ -0.92
SNX5-218ENST00000606570 ZNF592Q92610 1267 aa9.3□□□□□ -0.92
SNX5-218ENST00000606570 MROH2BQ7Z745 1585 aa9.29□□□□□ -0.92
SNX5-218ENST00000606570 NOP58Q9Y2X3 529 aaKnown RBP9.28□□□□□ -0.92
SNX5-218ENST00000606570 PATL2C9JE40 543 aaKnown RBP9.28□□□□□ -0.92
SNX5-218ENST00000606570 WRNQ14191 1432 aaPredicted RBP eCLIP9.28□□□□□ -0.92
SNX5-218ENST00000606570 WIZO95785 1651 aa9.27□□□□□ -0.93
SNX5-218ENST00000606570 C11orf95C9JLR9 678 aaPredicted RBP9.27□□□□□ -0.93
SNX5-218ENST00000606570 TRIM52Q96A61 297 aa9.27□□□□□ -0.93
SNX5-218ENST00000606570 KCNG1Q9UIX4 513 aa9.27□□□□□ -0.93
SNX5-218ENST00000606570 SOGA1O94964 1423 aa9.27□□□□□ -0.93
SNX5-218ENST00000606570 DDX10Q13206 875 aaKnown RBP9.27□□□□□ -0.93
SNX5-218ENST00000606570 TICAM2Q86XR7 235 aa9.26□□□□□ -0.93
SNX5-218ENST00000606570 NEFMP07197 916 aa9.25□□□□□ -0.93
SNX5-218ENST00000606570 CHRM1P11229 460 aaPredicted RBP9.25□□□□□ -0.93
SNX5-218ENST00000606570 KCNH8Q96L42 1107 aa9.24□□□□□ -0.93
SNX5-218ENST00000606570 RNF216Q9NWF9 866 aaPredicted RBP9.24□□□□□ -0.93
SNX5-218ENST00000606570 CCDC88BA6NC98 1476 aa9.24□□□□□ -0.93
SNX5-218ENST00000606570 PRDM4Q9UKN5 801 aa9.24□□□□□ -0.93
SNX5-218ENST00000606570 HMGB1P09429 215 aaKnown RBP9.24□□□□□ -0.93
SNX5-218ENST00000606570 TMED8Q6PL24 325 aaPredicted RBP9.24□□□□□ -0.93
SNX5-218ENST00000606570 CALD1Q05682 793 aaKnown RBP9.23□□□□□ -0.93
SNX5-218ENST00000606570 CLIP1P30622 1438 aa9.23□□□□□ -0.93
SNX5-218ENST00000606570 ANP32CO43423 234 aa9.21□□□□□ -0.93
SNX5-218ENST00000606570 ZNF526Q8TF50 670 aaPredicted RBP9.21□□□□□ -0.93
SNX5-218ENST00000606570 ABCC8Q09428 1581 aa9.21□□□□□ -0.93
SNX5-218ENST00000606570 FAM193AP78312 1265 aa9.21□□□□□ -0.94
SNX5-218ENST00000606570 ARID4BQ4LE39 1312 aaPredicted RBP9.21□□□□□ -0.94
SNX5-218ENST00000606570 GOLGA3Q08378 1498 aa9.21□□□□□ -0.94
SNX5-218ENST00000606570 PPM1GO15355 546 aaPredicted RBP9.21□□□□□ -0.94
SNX5-218ENST00000606570 PABPN1Q86U42 306 aaKnown RBP eCLIP9.21□□□□□ -0.94
SNX5-218ENST00000606570 VGLL3A8MV65 326 aa9.2□□□□□ -0.94
SNX5-218ENST00000606570 ATP1B4Q9UN42 357 aaPredicted RBP9.2□□□□□ -0.94
SNX5-218ENST00000606570 FAM43AQ8N2R8 423 aa9.19□□□□□ -0.94
SNX5-218ENST00000606570 ZNF830Q96NB3 372 aaPredicted RBP9.19□□□□□ -0.94
SNX5-218ENST00000606570 PLCD4Q9BRC7 762 aa9.19□□□□□ -0.94
SNX5-218ENST00000606570 HIRIP3Q9BW71 556 aaPredicted RBP9.19□□□□□ -0.94
SNX5-218ENST00000606570 BICRAQ9NZM4 1560 aa9.18□□□□□ -0.94
SNX5-218ENST00000606570 FAM43BQ6ZT52 329 aaPredicted RBP9.18□□□□□ -0.94
SNX5-218ENST00000606570 CLSTN1O94985 981 aa9.18□□□□□ -0.94
SNX5-218ENST00000606570 PTMAP06454 111 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms