RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 ZRANB1Q9UGI0 708 aa17.46■□□□□ 0.39
SH3D19-212ENST00000604440 CLCN6P51797 869 aa17.45■□□□□ 0.38
SH3D19-212ENST00000604440 DNAJC5Q9H3Z4 198 aa17.44■□□□□ 0.38
SH3D19-212ENST00000604440 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
SH3D19-212ENST00000604440 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
SH3D19-212ENST00000604440 PAK3O75914 559 aaPredicted RBP17.3■□□□□ 0.36
SH3D19-212ENST00000604440 GALR2O43603 387 aaPredicted RBP17.25■□□□□ 0.35
SH3D19-212ENST00000604440 PHF12Q96QT6 1004 aa17.25■□□□□ 0.35
SH3D19-212ENST00000604440 LHX8Q68G74 356 aa17.24■□□□□ 0.35
SH3D19-212ENST00000604440 DCBLD2Q96PD2 775 aa17.23■□□□□ 0.35
SH3D19-212ENST00000604440 CUX2O14529 1486 aa17.2■□□□□ 0.34
SH3D19-212ENST00000604440 FKBP8Q14318 412 aa17.11■□□□□ 0.33
SH3D19-212ENST00000604440 MIER1Q8N108 512 aa17.09■□□□□ 0.33
SH3D19-212ENST00000604440 PLEKHG5O94827 1062 aa17.06■□□□□ 0.32
SH3D19-212ENST00000604440 TSPYL2Q9H2G4 693 aaPredicted RBP17.06■□□□□ 0.32
SH3D19-212ENST00000604440 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
SH3D19-212ENST00000604440 MS4A3Q96HJ5 214 aa17.03■□□□□ 0.32
SH3D19-212ENST00000604440 CCDC61Q9Y6R9 512 aa17.03■□□□□ 0.32
SH3D19-212ENST00000604440 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
SH3D19-212ENST00000604440 PLCD3Q8N3E9 789 aa16.97■□□□□ 0.31
SH3D19-212ENST00000604440 RASEFQ8IZ41 740 aa16.96■□□□□ 0.31
SH3D19-212ENST00000604440 HMGXB3Q12766 1538 aa16.96■□□□□ 0.3
SH3D19-212ENST00000604440 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
SH3D19-212ENST00000604440 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
SH3D19-212ENST00000604440 ASTLQ6HA08 431 aaPredicted RBP16.91■□□□□ 0.3
SH3D19-212ENST00000604440 KIF12Q96FN5 646 aa16.9■□□□□ 0.3
SH3D19-212ENST00000604440 SMARCA2P51531 1590 aa16.89■□□□□ 0.29
SH3D19-212ENST00000604440 SMARCA4P51532 1647 aa16.87■□□□□ 0.29
SH3D19-212ENST00000604440 ATMINO43313 823 aaPredicted RBP16.86■□□□□ 0.29
SH3D19-212ENST00000604440 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
SH3D19-212ENST00000604440 ZBTB47Q9UFB7 747 aaPredicted RBP16.85■□□□□ 0.29
SH3D19-212ENST00000604440 POTEB2H3BUK9 544 aa16.82■□□□□ 0.28
SH3D19-212ENST00000604440 NUBP1P53384 320 aa16.82■□□□□ 0.28
SH3D19-212ENST00000604440 NESP48681 1621 aa16.81■□□□□ 0.28
SH3D19-212ENST00000604440 MAP3K13O43283 966 aa16.8■□□□□ 0.28
SH3D19-212ENST00000604440 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
SH3D19-212ENST00000604440 METRNQ9UJH8 293 aa16.77■□□□□ 0.28
SH3D19-212ENST00000604440 TRPC6Q9Y210 931 aa16.77■□□□□ 0.28
SH3D19-212ENST00000604440 SLC39A7Q92504 469 aa16.75■□□□□ 0.27
SH3D19-212ENST00000604440 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
SH3D19-212ENST00000604440 ATN1P54259 1190 aaPredicted RBP16.74■□□□□ 0.27
SH3D19-212ENST00000604440 OTUD5Q96G74 571 aa16.73■□□□□ 0.27
SH3D19-212ENST00000604440 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
SH3D19-212ENST00000604440 BMP2KQ9NSY1 1161 aaPredicted RBP16.72■□□□□ 0.27
SH3D19-212ENST00000604440 C7P10643 843 aa16.71■□□□□ 0.27
SH3D19-212ENST00000604440 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
SH3D19-212ENST00000604440 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
SH3D19-212ENST00000604440 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
SH3D19-212ENST00000604440 TIE1P35590 1138 aa16.68■□□□□ 0.26
SH3D19-212ENST00000604440 FAM212AQ96EL1 285 aa16.67■□□□□ 0.26
SH3D19-212ENST00000604440 SGIP1Q9BQI5 828 aa16.65■□□□□ 0.26
SH3D19-212ENST00000604440 PCDHB13Q9Y5F0 798 aa16.63■□□□□ 0.25
SH3D19-212ENST00000604440 POTEJP0CG39 1038 aa16.6■□□□□ 0.25
SH3D19-212ENST00000604440 TTLL13PA6NNM8 815 aa16.59■□□□□ 0.25
SH3D19-212ENST00000604440 VASPP50552 380 aaPredicted RBP16.57■□□□□ 0.24
SH3D19-212ENST00000604440 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
SH3D19-212ENST00000604440 IFNL1Q8IU54 200 aa16.56■□□□□ 0.24
SH3D19-212ENST00000604440 POTEFA5A3E0 1075 aa16.55■□□□□ 0.24
SH3D19-212ENST00000604440 MROH2BQ7Z745 1585 aa16.52■□□□□ 0.24
SH3D19-212ENST00000604440 WDR62O43379 1518 aa16.52■□□□□ 0.24
SH3D19-212ENST00000604440 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
SH3D19-212ENST00000604440 DCAF8Q5TAQ9 597 aa16.48■□□□□ 0.23
SH3D19-212ENST00000604440 TRIM35Q9UPQ4 493 aa16.48■□□□□ 0.23
SH3D19-212ENST00000604440 PYGBP11216 843 aa16.45■□□□□ 0.22
SH3D19-212ENST00000604440 MAMSTRQ6ZN01 415 aa16.45■□□□□ 0.22
SH3D19-212ENST00000604440 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
SH3D19-212ENST00000604440 COLQQ9Y215 455 aaPredicted RBP16.44■□□□□ 0.22
SH3D19-212ENST00000604440 IER5LQ5T953 404 aa16.42■□□□□ 0.22
SH3D19-212ENST00000604440 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
SH3D19-212ENST00000604440 TMEM106CQ9BVX2 250 aa16.41■□□□□ 0.22
SH3D19-212ENST00000604440 SEC24BO95487 1268 aa16.38■□□□□ 0.21
SH3D19-212ENST00000604440 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
SH3D19-212ENST00000604440 SCUBE2Q9NQ36 999 aa16.38■□□□□ 0.21
SH3D19-212ENST00000604440 CEP164Q9UPV0 1460 aa16.34■□□□□ 0.21
SH3D19-212ENST00000604440 GSE1Q14687 1217 aa16.33■□□□□ 0.2
SH3D19-212ENST00000604440 PCDHB8Q9UN66 801 aa16.33■□□□□ 0.2
SH3D19-212ENST00000604440 WIZO95785 1651 aa16.31■□□□□ 0.2
SH3D19-212ENST00000604440 IFNLR1Q8IU57 520 aaPredicted RBP16.28■□□□□ 0.2
SH3D19-212ENST00000604440 FANCD2Q9BXW9 1451 aa16.27■□□□□ 0.19
SH3D19-212ENST00000604440 CFTRP13569 1480 aa16.25■□□□□ 0.19
SH3D19-212ENST00000604440 IRX5P78411 483 aaPredicted RBP16.25■□□□□ 0.19
SH3D19-212ENST00000604440 POTEMA6NI47 508 aa16.24■□□□□ 0.19
SH3D19-212ENST00000604440 CHRM1P11229 460 aaPredicted RBP16.23■□□□□ 0.19
SH3D19-212ENST00000604440 ZNF467Q7Z7K2 595 aaPredicted RBP16.22■□□□□ 0.19
SH3D19-212ENST00000604440 PLCG2P16885 1265 aa16.21■□□□□ 0.19
SH3D19-212ENST00000604440 LCE2DQ5TA82 110 aaPredicted RBP16.21■□□□□ 0.19
SH3D19-212ENST00000604440 POTEGQ6S5H5 508 aa16.2■□□□□ 0.18
SH3D19-212ENST00000604440 SPOCK2Q92563 424 aa16.2■□□□□ 0.18
SH3D19-212ENST00000604440 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
SH3D19-212ENST00000604440 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
SH3D19-212ENST00000604440 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
SH3D19-212ENST00000604440 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
SH3D19-212ENST00000604440 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
SH3D19-212ENST00000604440 RSF1Q96T23 1441 aaPredicted RBP16.14■□□□□ 0.17
SH3D19-212ENST00000604440 OCEL1Q9H607 264 aa16.14■□□□□ 0.17
SH3D19-212ENST00000604440 TOP2AP11388 1531 aaKnown RBP16.13■□□□□ 0.17
SH3D19-212ENST00000604440 FAM163AQ96GL9 167 aaPredicted RBP16.1■□□□□ 0.17
SH3D19-212ENST00000604440 CIZ1Q9ULV3 898 aaPredicted RBP16.08■□□□□ 0.16
SH3D19-212ENST00000604440 PSEN1P49768 467 aa16.07■□□□□ 0.16
SH3D19-212ENST00000604440 ARHGEF11O15085 1522 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms