RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 RUSC2Q8N2Y8 1516 aa29.06■■■□□ 2.24
SSBP4-211ENST00000601614 ABCC10Q5T3U5 1492 aa29.04■■■□□ 2.24
SSBP4-211ENST00000601614 DIP2BQ9P265 1576 aa29■■■□□ 2.23
SSBP4-211ENST00000601614 FAM69CQ0P6D2 419 aa28.99■■■□□ 2.23
SSBP4-211ENST00000601614 MAPKBP1O60336 1514 aa28.99■■■□□ 2.23
SSBP4-211ENST00000601614 ADCY10Q96PN6 1610 aa28.98■■■□□ 2.23
SSBP4-211ENST00000601614 TSPOAP1O95153 1857 aa28.88■■■□□ 2.21
SSBP4-211ENST00000601614 KDM6BO15054 1643 aa28.87■■■□□ 2.21
SSBP4-211ENST00000601614 NPM1P06748 294 aaKnown RBP eCLIP28.86■■■□□ 2.21
SSBP4-211ENST00000601614 KDM4FA0A1W2PPD8 638 aa28.84■■■□□ 2.21
SSBP4-211ENST00000601614 KIAA0586Q9BVV6 1533 aa28.78■■■□□ 2.2
SSBP4-211ENST00000601614 IGF1RP08069 1367 aa28.69■■■□□ 2.18
SSBP4-211ENST00000601614 CUL7Q14999 1698 aa28.68■■■□□ 2.18
SSBP4-211ENST00000601614 PPRC1Q5VV67 1664 aaKnown RBP28.64■■■□□ 2.17
SSBP4-211ENST00000601614 PTPRGP23470 1445 aa28.6■■■□□ 2.17
SSBP4-211ENST00000601614 KIF27Q86VH2 1401 aa28.59■■■□□ 2.17
SSBP4-211ENST00000601614 TTBK1Q5TCY1 1321 aaPredicted RBP28.56■■■□□ 2.16
SSBP4-211ENST00000601614 ABCC2Q92887 1545 aa28.56■■■□□ 2.16
SSBP4-211ENST00000601614 GLI2P10070 1586 aa28.53■■■□□ 2.16
SSBP4-211ENST00000601614 ASXL2Q76L83 1435 aa28.52■■■□□ 2.16
SSBP4-211ENST00000601614 ILDR1Q86SU0 546 aaPredicted RBP28.51■■■□□ 2.15
SSBP4-211ENST00000601614 TNIKQ9UKE5 1360 aa28.5■■■□□ 2.15
SSBP4-211ENST00000601614 CARMIL1Q5VZK9 1371 aa28.47■■■□□ 2.15
SSBP4-211ENST00000601614 ADGRL1O94910 1474 aa28.46■■■□□ 2.15
SSBP4-211ENST00000601614 PLB1Q6P1J6 1458 aa28.46■■■□□ 2.15
SSBP4-211ENST00000601614 COL17A1Q9UMD9 1497 aaPredicted RBP28.45■■■□□ 2.14
SSBP4-211ENST00000601614 IQGAP2Q13576 1575 aa28.45■■■□□ 2.14
SSBP4-211ENST00000601614 CARMIL2Q6F5E8 1435 aa28.44■■■□□ 2.14
SSBP4-211ENST00000601614 UHRF1BP1LA0JNW5 1464 aa28.43■■■□□ 2.14
SSBP4-211ENST00000601614 MAP3K4Q9Y6R4 1608 aa28.4■■■□□ 2.14
SSBP4-211ENST00000601614 DISP1Q96F81 1524 aa28.39■■■□□ 2.14
SSBP4-211ENST00000601614 UACAQ9BZF9 1416 aa28.37■■■□□ 2.13
SSBP4-211ENST00000601614 EPRSP07814 1512 aaKnown RBP28.36■■■□□ 2.13
SSBP4-211ENST00000601614 KDM5BQ9UGL1 1544 aa28.33■■■□□ 2.13
SSBP4-211ENST00000601614 ZCCHC11Q5TAX3 1644 aaKnown RBP28.32■■■□□ 2.12
SSBP4-211ENST00000601614 HECW2Q9P2P5 1572 aa28.28■■■□□ 2.12
SSBP4-211ENST00000601614 UGGT2Q9NYU1 1516 aa28.25■■■□□ 2.11
SSBP4-211ENST00000601614 TEX14Q8IWB6 1497 aa28.24■■■□□ 2.11
SSBP4-211ENST00000601614 KIAA0556O60303 1618 aa28.23■■■□□ 2.11
SSBP4-211ENST00000601614 RAPGEF2Q9Y4G8 1499 aa28.15■■■□□ 2.1
SSBP4-211ENST00000601614 WDR7Q9Y4E6 1490 aa28.14■■■□□ 2.09
SSBP4-211ENST00000601614 CFAP43Q8NDM7 1665 aa28.07■■■□□ 2.08
SSBP4-211ENST00000601614 CTTNBP2Q8WZ74 1663 aa28.05■■■□□ 2.08
SSBP4-211ENST00000601614 MAGI3Q5TCQ9 1506 aa28.03■■■□□ 2.08
SSBP4-211ENST00000601614 CD109Q6YHK3 1445 aa28.01■■■□□ 2.08
SSBP4-211ENST00000601614 ABCA8O94911 1581 aa28.01■■■□□ 2.07
SSBP4-211ENST00000601614 KIF21BO75037 1637 aa28■■■□□ 2.07
SSBP4-211ENST00000601614 KCNH8Q96L42 1107 aa27.95■■■□□ 2.06
SSBP4-211ENST00000601614 GOLGA3Q08378 1498 aa27.89■■■□□ 2.05
SSBP4-211ENST00000601614 ARAP3Q8WWN8 1544 aa27.84■■■□□ 2.05
SSBP4-211ENST00000601614 ADAMTSL3P82987 1691 aa27.8■■■□□ 2.04
SSBP4-211ENST00000601614 ARID3CA6NKF2 412 aa27.76■■■□□ 2.03
SSBP4-211ENST00000601614 ATP10BO94823 1461 aa27.76■■■□□ 2.03
SSBP4-211ENST00000601614 ABCA9Q8IUA7 1624 aa27.75■■■□□ 2.03
SSBP4-211ENST00000601614 PRXQ9BXM0 1461 aa27.75■■■□□ 2.03
SSBP4-211ENST00000601614 PTPRMP28827 1452 aa27.74■■■□□ 2.03
SSBP4-211ENST00000601614 FBXO41Q8TF61 875 aa27.73■■■□□ 2.03
SSBP4-211ENST00000601614 BCORL1Q5H9F3 1711 aa27.67■■■□□ 2.02
SSBP4-211ENST00000601614 FRMPD1Q5SYB0 1578 aa27.67■■■□□ 2.02
SSBP4-211ENST00000601614 RAPGEF3O95398 923 aa27.66■■■□□ 2.02
SSBP4-211ENST00000601614 P3H3Q8IVL6 736 aa27.66■■■□□ 2.02
SSBP4-211ENST00000601614 MADDQ8WXG6 1647 aa27.64■■■□□ 2.02
SSBP4-211ENST00000601614 PHLDB1Q86UU1 1377 aa27.61■■■□□ 2.01
SSBP4-211ENST00000601614 NEO1Q92859 1461 aa27.6■■■□□ 2.01
SSBP4-211ENST00000601614 PCF11O94913 1555 aaKnown RBP27.59■■■□□ 2.01
SSBP4-211ENST00000601614 SAMD9Q5K651 1589 aa27.59■■■□□ 2.01
SSBP4-211ENST00000601614 RAPGEF6Q8TEU7 1601 aa27.59■■■□□ 2.01
SSBP4-211ENST00000601614 LMTK3Q96Q04 1460 aa27.57■■■□□ 2
SSBP4-211ENST00000601614 RIMS1Q86UR5 1692 aaKnown RBP27.53■■■□□ 2
SSBP4-211ENST00000601614 ARHGEF40Q8TER5 1519 aa27.51■■□□□ 1.99
SSBP4-211ENST00000601614 RICTORQ6R327 1708 aa27.5■■□□□ 1.99
SSBP4-211ENST00000601614 NUP153P49790 1475 aaKnown RBP27.49■■□□□ 1.99
SSBP4-211ENST00000601614 ARID4BQ4LE39 1312 aaPredicted RBP27.48■■□□□ 1.99
SSBP4-211ENST00000601614 FAM9AQ8IZU1 332 aaPredicted RBP27.46■■□□□ 1.99
SSBP4-211ENST00000601614 SIGLEC1Q9BZZ2 1709 aa27.46■■□□□ 1.99
SSBP4-211ENST00000601614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.43■■□□□ 1.98
SSBP4-211ENST00000601614 HNRNPUL2Q1KMD3 747 aaKnown RBP27.43■■□□□ 1.98
SSBP4-211ENST00000601614 DENND4BO75064 1496 aaPredicted RBP27.4■■□□□ 1.98
SSBP4-211ENST00000601614 HSPA2P54652 639 aa27.38■■□□□ 1.97
SSBP4-211ENST00000601614 AKNAQ7Z591 1439 aa27.37■■□□□ 1.97
SSBP4-211ENST00000601614 FHOD3Q2V2M9 1422 aa27.36■■□□□ 1.97
SSBP4-211ENST00000601614 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.36■■□□□ 1.971e-6■■□□□ 13.7
SSBP4-211ENST00000601614 TTC37Q6PGP7 1564 aa27.35■■□□□ 1.97
SSBP4-211ENST00000601614 FANCAO15360 1455 aa27.34■■□□□ 1.97
SSBP4-211ENST00000601614 ZMYM4Q5VZL5 1548 aa27.34■■□□□ 1.97
SSBP4-211ENST00000601614 CFAP74Q9C0B2 1584 aa27.34■■□□□ 1.97
SSBP4-211ENST00000601614 YEATS2Q9ULM3 1422 aa27.33■■□□□ 1.96
SSBP4-211ENST00000601614 CSRNP3Q8WYN3 585 aa27.32■■□□□ 1.96
SSBP4-211ENST00000601614 PLPPR3Q6T4P5 718 aa27.31■■□□□ 1.96
SSBP4-211ENST00000601614 ZFYVE16Q7Z3T8 1539 aa27.3■■□□□ 1.96
SSBP4-211ENST00000601614 RANGAP1P46060 587 aaPredicted RBP27.29■■□□□ 1.96
SSBP4-211ENST00000601614 FER1L4A9Z1Z3 1794 aa27.28■■□□□ 1.96
SSBP4-211ENST00000601614 PLEKHD1A6NEE1 506 aa27.27■■□□□ 1.96
SSBP4-211ENST00000601614 EFCAB5A4FU69 1503 aa27.26■■□□□ 1.96
SSBP4-211ENST00000601614 HECW1Q76N89 1606 aa27.26■■□□□ 1.95
SSBP4-211ENST00000601614 POGZQ7Z3K3 1410 aa27.24■■□□□ 1.95
SSBP4-211ENST00000601614 MLECQ14165 292 aa27.2■■□□□ 1.94
SSBP4-211ENST00000601614 CERKQ8TCT0 537 aa27.2■■□□□ 1.94
SSBP4-211ENST00000601614 MAGI2Q86UL8 1455 aa27.19■■□□□ 1.94
SSBP4-211ENST00000601614 CDK13Q14004 1512 aaKnown RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms