RNA–Protein interactions for RNA: ENST00000600528.1

COPE-210, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 261 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-210ENST00000600528 ABCC10Q5T3U5 1492 aa16.88■□□□□ 0.29
COPE-210ENST00000600528 FAM69CQ0P6D2 419 aa16.86■□□□□ 0.29
COPE-210ENST00000600528 MAPKBP1O60336 1514 aa16.84■□□□□ 0.29
COPE-210ENST00000600528 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
COPE-210ENST00000600528 SUPT5HO00267 1087 aaKnown RBP16.81■□□□□ 0.28
COPE-210ENST00000600528 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
COPE-210ENST00000600528 DIP2BQ9P265 1576 aa16.78■□□□□ 0.28
COPE-210ENST00000600528 KDM4FA0A1W2PPD8 638 aa16.78■□□□□ 0.28
COPE-210ENST00000600528 ADCY10Q96PN6 1610 aa16.75■□□□□ 0.27
COPE-210ENST00000600528 KIAA0586Q9BVV6 1533 aa16.72■□□□□ 0.27
COPE-210ENST00000600528 KDM6BO15054 1643 aa16.7■□□□□ 0.26
COPE-210ENST00000600528 IGF1RP08069 1367 aa16.68■□□□□ 0.26
COPE-210ENST00000600528 PTPRGP23470 1445 aa16.62■□□□□ 0.25
COPE-210ENST00000600528 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
COPE-210ENST00000600528 TSPOAP1O95153 1857 aa16.59■□□□□ 0.25
COPE-210ENST00000600528 ILDR1Q86SU0 546 aaPredicted RBP16.59■□□□□ 0.25
COPE-210ENST00000600528 ABCC2Q92887 1545 aa16.58■□□□□ 0.24
COPE-210ENST00000600528 CUL7Q14999 1698 aa16.58■□□□□ 0.24
COPE-210ENST00000600528 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
COPE-210ENST00000600528 GLI2P10070 1586 aa16.56■□□□□ 0.24
COPE-210ENST00000600528 PLB1Q6P1J6 1458 aa16.56■□□□□ 0.24
COPE-210ENST00000600528 ASXL2Q76L83 1435 aa16.54■□□□□ 0.24
COPE-210ENST00000600528 UHRF1BP1LA0JNW5 1464 aa16.54■□□□□ 0.24
COPE-210ENST00000600528 CARMIL2Q6F5E8 1435 aa16.53■□□□□ 0.24
COPE-210ENST00000600528 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
COPE-210ENST00000600528 PPRC1Q5VV67 1664 aaKnown RBP16.53■□□□□ 0.24
COPE-210ENST00000600528 COL17A1Q9UMD9 1497 aaPredicted RBP16.5■□□□□ 0.23
COPE-210ENST00000600528 ADGRL1O94910 1474 aa16.49■□□□□ 0.23
COPE-210ENST00000600528 UACAQ9BZF9 1416 aa16.49■□□□□ 0.23
COPE-210ENST00000600528 TTBK1Q5TCY1 1321 aaPredicted RBP16.48■□□□□ 0.23
COPE-210ENST00000600528 EPRSP07814 1512 aaKnown RBP16.45■□□□□ 0.22
COPE-210ENST00000600528 KDM5BQ9UGL1 1544 aa16.45■□□□□ 0.22
COPE-210ENST00000600528 IQGAP2Q13576 1575 aa16.45■□□□□ 0.22
COPE-210ENST00000600528 DISP1Q96F81 1524 aa16.45■□□□□ 0.22
COPE-210ENST00000600528 MAP3K4Q9Y6R4 1608 aa16.42■□□□□ 0.22
COPE-210ENST00000600528 TEX14Q8IWB6 1497 aa16.41■□□□□ 0.22
COPE-210ENST00000600528 UGGT2Q9NYU1 1516 aa16.39■□□□□ 0.21
COPE-210ENST00000600528 HECW2Q9P2P5 1572 aa16.37■□□□□ 0.21
COPE-210ENST00000600528 ZCCHC11Q5TAX3 1644 aaKnown RBP16.34■□□□□ 0.21
COPE-210ENST00000600528 WDR7Q9Y4E6 1490 aa16.32■□□□□ 0.2
COPE-210ENST00000600528 RAPGEF2Q9Y4G8 1499 aa16.32■□□□□ 0.2
COPE-210ENST00000600528 KIAA0556O60303 1618 aa16.31■□□□□ 0.2
COPE-210ENST00000600528 MAGI3Q5TCQ9 1506 aa16.3■□□□□ 0.2
COPE-210ENST00000600528 CD109Q6YHK3 1445 aa16.28■□□□□ 0.2
COPE-210ENST00000600528 CFAP43Q8NDM7 1665 aa16.23■□□□□ 0.19
COPE-210ENST00000600528 ABCA8O94911 1581 aa16.22■□□□□ 0.19
COPE-210ENST00000600528 KCNH8Q96L42 1107 aa16.22■□□□□ 0.19
COPE-210ENST00000600528 GOLGA3Q08378 1498 aa16.2■□□□□ 0.18
COPE-210ENST00000600528 ARAP3Q8WWN8 1544 aa16.19■□□□□ 0.18
COPE-210ENST00000600528 FBXO41Q8TF61 875 aa16.18■□□□□ 0.18
COPE-210ENST00000600528 PHLDB1Q86UU1 1377 aa16.14■□□□□ 0.17
COPE-210ENST00000600528 KIF21BO75037 1637 aa16.14■□□□□ 0.17
COPE-210ENST00000600528 CTTNBP2Q8WZ74 1663 aa16.13■□□□□ 0.17
COPE-210ENST00000600528 ATP10BO94823 1461 aa16.1■□□□□ 0.17
COPE-210ENST00000600528 PTPRMP28827 1452 aa16.1■□□□□ 0.17
COPE-210ENST00000600528 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
COPE-210ENST00000600528 ADAMTSL3P82987 1691 aa16.09■□□□□ 0.17
COPE-210ENST00000600528 ABCA9Q8IUA7 1624 aa16.06■□□□□ 0.16
COPE-210ENST00000600528 RAPGEF3O95398 923 aa16.06■□□□□ 0.16
COPE-210ENST00000600528 FAM9AQ8IZU1 332 aaPredicted RBP16.05■□□□□ 0.16
COPE-210ENST00000600528 NEO1Q92859 1461 aa16.04■□□□□ 0.16
COPE-210ENST00000600528 ARID3CA6NKF2 412 aa16.02■□□□□ 0.16
COPE-210ENST00000600528 P3H3Q8IVL6 736 aa16■□□□□ 0.15
COPE-210ENST00000600528 BCORL1Q5H9F3 1711 aa15.99■□□□□ 0.15
COPE-210ENST00000600528 LMTK3Q96Q04 1460 aa15.99■□□□□ 0.15
COPE-210ENST00000600528 PCF11O94913 1555 aaKnown RBP15.99■□□□□ 0.15
COPE-210ENST00000600528 FRMPD1Q5SYB0 1578 aa15.98■□□□□ 0.15
COPE-210ENST00000600528 MADDQ8WXG6 1647 aa15.96■□□□□ 0.15
COPE-210ENST00000600528 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
COPE-210ENST00000600528 SAMD9Q5K651 1589 aa15.95■□□□□ 0.14
COPE-210ENST00000600528 RAPGEF6Q8TEU7 1601 aa15.94■□□□□ 0.14
COPE-210ENST00000600528 FHOD3Q2V2M9 1422 aa15.92■□□□□ 0.14
COPE-210ENST00000600528 DENND4BO75064 1496 aaPredicted RBP15.91■□□□□ 0.14
COPE-210ENST00000600528 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
COPE-210ENST00000600528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
COPE-210ENST00000600528 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
COPE-210ENST00000600528 ARHGEF40Q8TER5 1519 aa15.9■□□□□ 0.14
COPE-210ENST00000600528 AKNAQ7Z591 1439 aa15.89■□□□□ 0.13
COPE-210ENST00000600528 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
COPE-210ENST00000600528 PLEKHD1A6NEE1 506 aa15.88■□□□□ 0.13
COPE-210ENST00000600528 HSPA2P54652 639 aa15.88■□□□□ 0.13
COPE-210ENST00000600528 RICTORQ6R327 1708 aa15.88■□□□□ 0.13
COPE-210ENST00000600528 RIMS1Q86UR5 1692 aaKnown RBP15.86■□□□□ 0.13
COPE-210ENST00000600528 POGZQ7Z3K3 1410 aa15.85■□□□□ 0.13
COPE-210ENST00000600528 FANCAO15360 1455 aa15.85■□□□□ 0.13
COPE-210ENST00000600528 ZMYM4Q5VZL5 1548 aa15.85■□□□□ 0.13
COPE-210ENST00000600528 CERKQ8TCT0 537 aa15.85■□□□□ 0.13
COPE-210ENST00000600528 MAGI2Q86UL8 1455 aa15.84■□□□□ 0.13
COPE-210ENST00000600528 YEATS2Q9ULM3 1422 aa15.83■□□□□ 0.12
COPE-210ENST00000600528 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.83■□□□□ 0.12
COPE-210ENST00000600528 CFAP74Q9C0B2 1584 aa15.81■□□□□ 0.12
COPE-210ENST00000600528 EFCAB5A4FU69 1503 aa15.8■□□□□ 0.12
COPE-210ENST00000600528 ZFYVE16Q7Z3T8 1539 aa15.8■□□□□ 0.12
COPE-210ENST00000600528 SIGLEC1Q9BZZ2 1709 aa15.8■□□□□ 0.12
COPE-210ENST00000600528 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
COPE-210ENST00000600528 TTC37Q6PGP7 1564 aa15.77■□□□□ 0.11
COPE-210ENST00000600528 PLCH2O75038 1416 aa15.77■□□□□ 0.11
COPE-210ENST00000600528 HECW1Q76N89 1606 aa15.76■□□□□ 0.11
COPE-210ENST00000600528 SCAPERQ9BY12 1400 aa15.76■□□□□ 0.11
COPE-210ENST00000600528 MLECQ14165 292 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms