RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 P3H3Q8IVL6 736 aa23.5■■□□□ 1.35
HIF3A-218ENST00000600383 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
HIF3A-218ENST00000600383 EIF4G3O43432 1585 aaKnown RBP23.42■■□□□ 1.34
HIF3A-218ENST00000600383 CTTNBP2Q8WZ74 1663 aa23.4■■□□□ 1.34
HIF3A-218ENST00000600383 ADAMTS12P58397 1594 aa23.38■■□□□ 1.33
HIF3A-218ENST00000600383 SNAPC4Q5SXM2 1469 aa23.38■■□□□ 1.33
HIF3A-218ENST00000600383 FBLN2P98095 1184 aa23.35■■□□□ 1.33
HIF3A-218ENST00000600383 CHMP7Q8WUX9 453 aaPredicted RBP23.32■■□□□ 1.32
HIF3A-218ENST00000600383 ATP1B4Q9UN42 357 aaPredicted RBP23.32■■□□□ 1.32
HIF3A-218ENST00000600383 FHOD3Q2V2M9 1422 aa23.32■■□□□ 1.32
HIF3A-218ENST00000600383 KANK4Q5T7N3 995 aaPredicted RBP23.29■■□□□ 1.32
HIF3A-218ENST00000600383 EFCAB5A4FU69 1503 aa23.27■■□□□ 1.32
HIF3A-218ENST00000600383 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
HIF3A-218ENST00000600383 GRIN2AQ12879 1464 aa23.23■■□□□ 1.31
HIF3A-218ENST00000600383 HRCP23327 699 aa23.21■■□□□ 1.31
HIF3A-218ENST00000600383 SYNJ2O15056 1496 aa23.2■■□□□ 1.31
HIF3A-218ENST00000600383 IQGAP2Q13576 1575 aa23.2■■□□□ 1.3
HIF3A-218ENST00000600383 SAMD9Q5K651 1589 aa23.16■■□□□ 1.3
HIF3A-218ENST00000600383 FMN1Q68DA7 1419 aa23.15■■□□□ 1.3
HIF3A-218ENST00000600383 KIAA0586Q9BVV6 1533 aa23.15■■□□□ 1.3
HIF3A-218ENST00000600383 PCF11O94913 1555 aaKnown RBP23.14■■□□□ 1.29
HIF3A-218ENST00000600383 CASKIN1Q8WXD9 1431 aa23.11■■□□□ 1.29
HIF3A-218ENST00000600383 TIAM1Q13009 1591 aa23.09■■□□□ 1.29
HIF3A-218ENST00000600383 FYCO1Q9BQS8 1478 aa23.07■■□□□ 1.28
HIF3A-218ENST00000600383 CEP170Q5SW79 1584 aa23.07■■□□□ 1.28
HIF3A-218ENST00000600383 HNRNPUL2Q1KMD3 747 aaKnown RBP23.07■■□□□ 1.28
HIF3A-218ENST00000600383 UGGT2Q9NYU1 1516 aa23.05■■□□□ 1.28
HIF3A-218ENST00000600383 MAP3K1Q13233 1512 aa23.05■■□□□ 1.28
HIF3A-218ENST00000600383 LRRC9Q6ZRR7 1453 aa23.02■■□□□ 1.28
HIF3A-218ENST00000600383 JPH4Q96JJ6 628 aa23.02■■□□□ 1.28
HIF3A-218ENST00000600383 NUP160Q12769 1436 aa23.01■■□□□ 1.27
HIF3A-218ENST00000600383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23■■□□□ 1.27
HIF3A-218ENST00000600383 DISP1Q96F81 1524 aa22.99■■□□□ 1.27
HIF3A-218ENST00000600383 ARID3CA6NKF2 412 aa22.96■■□□□ 1.27
HIF3A-218ENST00000600383 CFAP43Q8NDM7 1665 aa22.95■■□□□ 1.26
HIF3A-218ENST00000600383 KIAA0556O60303 1618 aa22.95■■□□□ 1.26
HIF3A-218ENST00000600383 CCER1Q8TC90 406 aaPredicted RBP22.91■■□□□ 1.26
HIF3A-218ENST00000600383 MTUS2Q5JR59 1369 aa22.91■■□□□ 1.26
HIF3A-218ENST00000600383 CHD1O14646 1710 aa22.9■■□□□ 1.26
HIF3A-218ENST00000600383 CARMIL2Q6F5E8 1435 aa22.9■■□□□ 1.26
HIF3A-218ENST00000600383 LRRIQ1Q96JM4 1722 aa22.88■■□□□ 1.25
HIF3A-218ENST00000600383 RRBP1Q9P2E9 1410 aaKnown RBP22.88■■□□□ 1.25
HIF3A-218ENST00000600383 PHLDB1Q86UU1 1377 aa22.88■■□□□ 1.25
HIF3A-218ENST00000600383 CCNB3Q8WWL7 1395 aa22.88■■□□□ 1.25
HIF3A-218ENST00000600383 ITGAEP38570 1179 aa22.87■■□□□ 1.25
HIF3A-218ENST00000600383 HECW1Q76N89 1606 aa22.84■■□□□ 1.25
HIF3A-218ENST00000600383 ZEB1P37275 1124 aaPredicted RBP22.84■■□□□ 1.25
HIF3A-218ENST00000600383 FAM50AQ14320 339 aaKnown RBP22.82■■□□□ 1.24
HIF3A-218ENST00000600383 CCDC18Q5T9S5 1454 aa22.82■■□□□ 1.24
HIF3A-218ENST00000600383 EPRSP07814 1512 aaKnown RBP22.82■■□□□ 1.24
HIF3A-218ENST00000600383 PRG4Q92954 1404 aaPredicted RBP22.81■■□□□ 1.24
HIF3A-218ENST00000600383 CDK13Q14004 1512 aaKnown RBP22.79■■□□□ 1.24
HIF3A-218ENST00000600383 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
HIF3A-218ENST00000600383 RAPGEF6Q8TEU7 1601 aa22.75■■□□□ 1.23
HIF3A-218ENST00000600383 NUP153P49790 1475 aaKnown RBP22.74■■□□□ 1.23
HIF3A-218ENST00000600383 MAGI3Q5TCQ9 1506 aa22.74■■□□□ 1.23
HIF3A-218ENST00000600383 NCOA2Q15596 1464 aa22.72■■□□□ 1.23
HIF3A-218ENST00000600383 EHBP1L1Q8N3D4 1523 aa22.72■■□□□ 1.23
HIF3A-218ENST00000600383 CDK11AQ9UQ88 783 aaPredicted RBP22.7■■□□□ 1.22
HIF3A-218ENST00000600383 PTPRGP23470 1445 aa22.69■■□□□ 1.22
HIF3A-218ENST00000600383 SUPT6HQ7KZ85 1726 aaKnown RBP22.68■■□□□ 1.22
HIF3A-218ENST00000600383 FGD6Q6ZV73 1430 aa22.66■■□□□ 1.22
HIF3A-218ENST00000600383 MYOM3Q5VTT5 1437 aa22.63■■□□□ 1.21
HIF3A-218ENST00000600383 SHROOM2Q13796 1616 aa22.62■■□□□ 1.21
HIF3A-218ENST00000600383 ERCC6L2Q5T890 1561 aa22.6■■□□□ 1.21
HIF3A-218ENST00000600383 ABCA8O94911 1581 aa22.59■■□□□ 1.21
HIF3A-218ENST00000600383 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.21
HIF3A-218ENST00000600383 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
HIF3A-218ENST00000600383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.57■■□□□ 1.2
HIF3A-218ENST00000600383 PLEKHD1A6NEE1 506 aa22.57■■□□□ 1.2
HIF3A-218ENST00000600383 ATP10BO94823 1461 aa22.55■■□□□ 1.2
HIF3A-218ENST00000600383 TROQ12816 1431 aaPredicted RBP22.53■■□□□ 1.2
HIF3A-218ENST00000600383 UACAQ9BZF9 1416 aa22.52■■□□□ 1.2
HIF3A-218ENST00000600383 OSCARQ8IYS5 282 aa22.51■■□□□ 1.19
HIF3A-218ENST00000600383 RAB3GAP2Q9H2M9 1393 aa22.49■■□□□ 1.19
HIF3A-218ENST00000600383 PTPN23Q9H3S7 1636 aa22.49■■□□□ 1.19
HIF3A-218ENST00000600383 SETD5Q9C0A6 1442 aa22.49■■□□□ 1.19
HIF3A-218ENST00000600383 MIA2Q96PC5 1412 aa22.46■■□□□ 1.19
HIF3A-218ENST00000600383 PTPRKQ15262 1439 aa22.45■■□□□ 1.18
HIF3A-218ENST00000600383 DHX57Q6P158 1386 aaKnown RBP22.45■■□□□ 1.18
HIF3A-218ENST00000600383 CHIC2Q9UKJ5 165 aa22.44■■□□□ 1.18
HIF3A-218ENST00000600383 ZNF644Q9H582 1327 aaPredicted RBP22.44■■□□□ 1.18
HIF3A-218ENST00000600383 CFDP1Q9UEE9 299 aaPredicted RBP22.43■■□□□ 1.18
HIF3A-218ENST00000600383 KIF14Q15058 1648 aa22.42■■□□□ 1.18
HIF3A-218ENST00000600383 ZNF777Q9ULD5 760 aaPredicted RBP22.42■■□□□ 1.18
HIF3A-218ENST00000600383 TCOF1Q13428 1488 aaKnown RBP22.41■■□□□ 1.18
HIF3A-218ENST00000600383 ABCC2Q92887 1545 aa22.38■■□□□ 1.17
HIF3A-218ENST00000600383 RRP7BPQ9NSQ0 103 aa22.37■■□□□ 1.17
HIF3A-218ENST00000600383 GPATCH8Q9UKJ3 1502 aaKnown RBP22.37■■□□□ 1.17
HIF3A-218ENST00000600383 KCNH8Q96L42 1107 aa22.35■■□□□ 1.17
HIF3A-218ENST00000600383 ADCY10Q96PN6 1610 aa22.35■■□□□ 1.17
HIF3A-218ENST00000600383 CLSPNQ9HAW4 1339 aa22.32■■□□□ 1.16
HIF3A-218ENST00000600383 HFM1A2PYH4 1435 aa22.31■■□□□ 1.16
HIF3A-218ENST00000600383 ABCC10Q5T3U5 1492 aa22.29■■□□□ 1.16
HIF3A-218ENST00000600383 ITSN2Q9NZM3 1697 aa22.29■■□□□ 1.16
HIF3A-218ENST00000600383 NAIPQ13075 1403 aa22.28■■□□□ 1.16
HIF3A-218ENST00000600383 UHRF1BP1LA0JNW5 1464 aa22.28■■□□□ 1.16
HIF3A-218ENST00000600383 DAPK1P53355 1430 aa22.27■■□□□ 1.16
HIF3A-218ENST00000600383 CAMSAP2Q08AD1 1489 aa22.27■■□□□ 1.16
HIF3A-218ENST00000600383 ABCC5O15440 1437 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms