RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 MNX1P50219 401 aaPredicted RBP19.37■□□□□ 0.69
SMG9-207ENST00000598860 EIF4G1Q04637 1599 aaKnown RBP19.34■□□□□ 0.69
SMG9-207ENST00000598860 FARP1Q9Y4F1 1045 aaPredicted RBP19.32■□□□□ 0.68
SMG9-207ENST00000598860 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
SMG9-207ENST00000598860 SPOCK2Q92563 424 aa19.29■□□□□ 0.68
SMG9-207ENST00000598860 NPM1P06748 294 aaKnown RBP eCLIP19.26■□□□□ 0.67
SMG9-207ENST00000598860 CECR2Q9BXF3 1484 aa19.23■□□□□ 0.67
SMG9-207ENST00000598860 NUBP1P53384 320 aa19.15■□□□□ 0.66
SMG9-207ENST00000598860 RASEFQ8IZ41 740 aa19.08■□□□□ 0.64
SMG9-207ENST00000598860 DCAF8Q5TAQ9 597 aa19.01■□□□□ 0.63
SMG9-207ENST00000598860 CIZ1Q9ULV3 898 aaPredicted RBP19.01■□□□□ 0.63
SMG9-207ENST00000598860 FAM212AQ96EL1 285 aa19■□□□□ 0.63
SMG9-207ENST00000598860 TSPYL2Q9H2G4 693 aaPredicted RBP18.98■□□□□ 0.63
SMG9-207ENST00000598860 GSE1Q14687 1217 aa18.96■□□□□ 0.63
SMG9-207ENST00000598860 CD44P16070 742 aaKnown RBP18.94■□□□□ 0.62
SMG9-207ENST00000598860 C19orf67A6NJJ6 358 aa18.92■□□□□ 0.62
SMG9-207ENST00000598860 HAX1O00165 279 aa18.92■□□□□ 0.62
SMG9-207ENST00000598860 PAK3O75914 559 aaPredicted RBP18.92■□□□□ 0.62
SMG9-207ENST00000598860 SMARCA4P51532 1647 aa18.89■□□□□ 0.62
SMG9-207ENST00000598860 PKD2Q13563 968 aa18.89■□□□□ 0.61
SMG9-207ENST00000598860 NCAPD3P42695 1498 aa18.87■□□□□ 0.61
SMG9-207ENST00000598860 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
SMG9-207ENST00000598860 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
SMG9-207ENST00000598860 ATAD2BQ9ULI0 1458 aa18.85■□□□□ 0.61
SMG9-207ENST00000598860 SMARCA2P51531 1590 aa18.82■□□□□ 0.6
SMG9-207ENST00000598860 CCDC61Q9Y6R9 512 aa18.8■□□□□ 0.6
SMG9-207ENST00000598860 ECM2O94769 699 aaPredicted RBP18.79■□□□□ 0.6
SMG9-207ENST00000598860 EVX2Q03828 476 aa18.76■□□□□ 0.59
SMG9-207ENST00000598860 PYGBP11216 843 aa18.75■□□□□ 0.59
SMG9-207ENST00000598860 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
SMG9-207ENST00000598860 MROH2BQ7Z745 1585 aa18.75■□□□□ 0.59
SMG9-207ENST00000598860 HMGXB3Q12766 1538 aa18.72■□□□□ 0.59
SMG9-207ENST00000598860 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
SMG9-207ENST00000598860 PHF12Q96QT6 1004 aa18.69■□□□□ 0.58
SMG9-207ENST00000598860 BAZ1BQ9UIG0 1483 aaKnown RBP18.69■□□□□ 0.58
SMG9-207ENST00000598860 ZNF579Q8NAF0 562 aaKnown RBP18.67■□□□□ 0.58
SMG9-207ENST00000598860 CHRM1P11229 460 aaPredicted RBP18.66■□□□□ 0.58
SMG9-207ENST00000598860 PLCB2Q00722 1185 aa18.64■□□□□ 0.57
SMG9-207ENST00000598860 KIF12Q96FN5 646 aa18.61■□□□□ 0.57
SMG9-207ENST00000598860 RGL2O15211 777 aa18.6■□□□□ 0.57
SMG9-207ENST00000598860 MAP3K13O43283 966 aa18.58■□□□□ 0.56
SMG9-207ENST00000598860 RNF25Q96BH1 459 aaPredicted RBP18.54■□□□□ 0.56
SMG9-207ENST00000598860 PCDHB13Q9Y5F0 798 aa18.54■□□□□ 0.56
SMG9-207ENST00000598860 WIZO95785 1651 aa18.54■□□□□ 0.56
SMG9-207ENST00000598860 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
SMG9-207ENST00000598860 SGIP1Q9BQI5 828 aa18.49■□□□□ 0.55
SMG9-207ENST00000598860 PCDHB8Q9UN66 801 aa18.48■□□□□ 0.55
SMG9-207ENST00000598860 RIOK3O14730 519 aaKnown RBP18.47■□□□□ 0.55
SMG9-207ENST00000598860 ZNF467Q7Z7K2 595 aaPredicted RBP18.47■□□□□ 0.55
SMG9-207ENST00000598860 IFNL1Q8IU54 200 aa18.47■□□□□ 0.55
SMG9-207ENST00000598860 MS4A3Q96HJ5 214 aa18.47■□□□□ 0.55
SMG9-207ENST00000598860 ERCC6Q03468 1493 aa18.46■□□□□ 0.54
SMG9-207ENST00000598860 NESP48681 1621 aa18.45■□□□□ 0.54
SMG9-207ENST00000598860 CLCN6P51797 869 aa18.42■□□□□ 0.54
SMG9-207ENST00000598860 GALR2O43603 387 aaPredicted RBP18.41■□□□□ 0.54
SMG9-207ENST00000598860 GABBR2O75899 941 aa18.4■□□□□ 0.54
SMG9-207ENST00000598860 SP7Q8TDD2 431 aaPredicted RBP18.4■□□□□ 0.54
SMG9-207ENST00000598860 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
SMG9-207ENST00000598860 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
SMG9-207ENST00000598860 VGFO15240 615 aaPredicted RBP18.36■□□□□ 0.53
SMG9-207ENST00000598860 TAOK2Q9UL54 1235 aa18.35■□□□□ 0.53
SMG9-207ENST00000598860 CADPSQ9ULU8 1353 aa18.34■□□□□ 0.53
SMG9-207ENST00000598860 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.53
SMG9-207ENST00000598860 TRPC6Q9Y210 931 aa18.33■□□□□ 0.52
SMG9-207ENST00000598860 PDAP1Q13442 181 aaKnown RBP18.31■□□□□ 0.52
SMG9-207ENST00000598860 PDS5BQ9NTI5 1447 aa18.31■□□□□ 0.52
SMG9-207ENST00000598860 CUX2O14529 1486 aa18.29■□□□□ 0.52
SMG9-207ENST00000598860 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.29■□□□□ 0.52
SMG9-207ENST00000598860 SUPT5HO00267 1087 aaKnown RBP18.29■□□□□ 0.52
SMG9-207ENST00000598860 PSEN1P49768 467 aa18.29■□□□□ 0.52
SMG9-207ENST00000598860 ZFP91Q96JP5 570 aaPredicted RBP18.29■□□□□ 0.52
SMG9-207ENST00000598860 BBXQ8WY36 941 aaPredicted RBP18.27■□□□□ 0.52
SMG9-207ENST00000598860 CHGAP10645 457 aaKnown RBP18.25■□□□□ 0.51
SMG9-207ENST00000598860 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.24■□□□□ 0.51
SMG9-207ENST00000598860 STK25O00506 426 aa18.22■□□□□ 0.51
SMG9-207ENST00000598860 TIE1P35590 1138 aa18.2■□□□□ 0.5
SMG9-207ENST00000598860 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
SMG9-207ENST00000598860 TMEM106CQ9BVX2 250 aa18.19■□□□□ 0.5
SMG9-207ENST00000598860 BCL11BQ9C0K0 894 aaPredicted RBP18.18■□□□□ 0.5
SMG9-207ENST00000598860 STK24Q9Y6E0 443 aa18.18■□□□□ 0.5
SMG9-207ENST00000598860 BMP2KQ9NSY1 1161 aaPredicted RBP18.17■□□□□ 0.5
SMG9-207ENST00000598860 CFTRP13569 1480 aa18.16■□□□□ 0.5
SMG9-207ENST00000598860 HS6ST3Q8IZP7 471 aa18.16■□□□□ 0.5
SMG9-207ENST00000598860 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
SMG9-207ENST00000598860 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.5
SMG9-207ENST00000598860 TTLL13PA6NNM8 815 aa18.14■□□□□ 0.49
SMG9-207ENST00000598860 DCBLD2Q96PD2 775 aa18.14■□□□□ 0.49
SMG9-207ENST00000598860 PAXIP1Q6ZW49 1069 aaPredicted RBP18.12■□□□□ 0.49
SMG9-207ENST00000598860 FANCD2Q9BXW9 1451 aa18.1■□□□□ 0.49
SMG9-207ENST00000598860 MRC2Q9UBG0 1479 aa18.09■□□□□ 0.49
SMG9-207ENST00000598860 VSIG10Q8N0Z9 540 aa18.09■□□□□ 0.49
SMG9-207ENST00000598860 CEP164Q9UPV0 1460 aa18.08■□□□□ 0.49
SMG9-207ENST00000598860 ATMINO43313 823 aaPredicted RBP18.08■□□□□ 0.48
SMG9-207ENST00000598860 CABP2Q9NPB3 220 aa18.08■□□□□ 0.48
SMG9-207ENST00000598860 ATN1P54259 1190 aaPredicted RBP18.07■□□□□ 0.48
SMG9-207ENST00000598860 CFAP44Q96MT7 982 aa18.07■□□□□ 0.48
SMG9-207ENST00000598860 ASTLQ6HA08 431 aaPredicted RBP18.06■□□□□ 0.48
SMG9-207ENST00000598860 TRIM35Q9UPQ4 493 aa18.04■□□□□ 0.48
SMG9-207ENST00000598860 GOLGA2Q08379 1002 aa18.02■□□□□ 0.48
SMG9-207ENST00000598860 POTEIP0CG38 1075 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms