RNA–Protein interactions for RNA: ENST00000597740.1

CAPN12-208, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-208ENST00000597740 FAM69CQ0P6D2 419 aa28.93■■■□□ 2.22
CAPN12-208ENST00000597740 NPM1P06748 294 aaKnown RBP eCLIP28.89■■■□□ 2.22
CAPN12-208ENST00000597740 ABCC10Q5T3U5 1492 aa28.89■■■□□ 2.22
CAPN12-208ENST00000597740 RUSC2Q8N2Y8 1516 aa28.87■■■□□ 2.21
CAPN12-208ENST00000597740 MAPKBP1O60336 1514 aa28.82■■■□□ 2.2
CAPN12-208ENST00000597740 DIP2BQ9P265 1576 aa28.8■■■□□ 2.2
CAPN12-208ENST00000597740 ADCY10Q96PN6 1610 aa28.77■■■□□ 2.2
CAPN12-208ENST00000597740 KDM6BO15054 1643 aa28.72■■■□□ 2.19
CAPN12-208ENST00000597740 KDM4FA0A1W2PPD8 638 aa28.69■■■□□ 2.18
CAPN12-208ENST00000597740 KIAA0586Q9BVV6 1533 aa28.65■■■□□ 2.18
CAPN12-208ENST00000597740 TSPOAP1O95153 1857 aa28.63■■■□□ 2.17
CAPN12-208ENST00000597740 IGF1RP08069 1367 aa28.56■■■□□ 2.16
CAPN12-208ENST00000597740 TTBK1Q5TCY1 1321 aaPredicted RBP28.54■■■□□ 2.16
CAPN12-208ENST00000597740 PTPRGP23470 1445 aa28.52■■■□□ 2.16
CAPN12-208ENST00000597740 KIF27Q86VH2 1401 aa28.52■■■□□ 2.16
CAPN12-208ENST00000597740 CUL7Q14999 1698 aa28.51■■■□□ 2.16
CAPN12-208ENST00000597740 ABCC2Q92887 1545 aa28.43■■■□□ 2.14
CAPN12-208ENST00000597740 TNIKQ9UKE5 1360 aa28.41■■■□□ 2.14
CAPN12-208ENST00000597740 CARMIL2Q6F5E8 1435 aa28.41■■■□□ 2.14
CAPN12-208ENST00000597740 ILDR1Q86SU0 546 aaPredicted RBP28.4■■■□□ 2.14
CAPN12-208ENST00000597740 ASXL2Q76L83 1435 aa28.4■■■□□ 2.14
CAPN12-208ENST00000597740 PLB1Q6P1J6 1458 aa28.37■■■□□ 2.13
CAPN12-208ENST00000597740 CARMIL1Q5VZK9 1371 aa28.37■■■□□ 2.13
CAPN12-208ENST00000597740 GLI2P10070 1586 aa28.35■■■□□ 2.13
CAPN12-208ENST00000597740 PPRC1Q5VV67 1664 aaKnown RBP28.35■■■□□ 2.13
CAPN12-208ENST00000597740 ADGRL1O94910 1474 aa28.33■■■□□ 2.13
CAPN12-208ENST00000597740 IQGAP2Q13576 1575 aa28.3■■■□□ 2.12
CAPN12-208ENST00000597740 UHRF1BP1LA0JNW5 1464 aa28.28■■■□□ 2.12
CAPN12-208ENST00000597740 UACAQ9BZF9 1416 aa28.27■■■□□ 2.12
CAPN12-208ENST00000597740 COL17A1Q9UMD9 1497 aaPredicted RBP28.24■■■□□ 2.11
CAPN12-208ENST00000597740 EPRSP07814 1512 aaKnown RBP28.22■■■□□ 2.11
CAPN12-208ENST00000597740 DISP1Q96F81 1524 aa28.22■■■□□ 2.11
CAPN12-208ENST00000597740 MAP3K4Q9Y6R4 1608 aa28.18■■■□□ 2.1
CAPN12-208ENST00000597740 KDM5BQ9UGL1 1544 aa28.18■■■□□ 2.1
CAPN12-208ENST00000597740 TEX14Q8IWB6 1497 aa28.16■■■□□ 2.1
CAPN12-208ENST00000597740 ZCCHC11Q5TAX3 1644 aaKnown RBP28.13■■■□□ 2.09
CAPN12-208ENST00000597740 HECW2Q9P2P5 1572 aa28.11■■■□□ 2.09
CAPN12-208ENST00000597740 UGGT2Q9NYU1 1516 aa28.09■■■□□ 2.09
CAPN12-208ENST00000597740 KIAA0556O60303 1618 aa28.06■■■□□ 2.08
CAPN12-208ENST00000597740 RAPGEF2Q9Y4G8 1499 aa28.04■■■□□ 2.08
CAPN12-208ENST00000597740 WDR7Q9Y4E6 1490 aa28.02■■■□□ 2.08
CAPN12-208ENST00000597740 CD109Q6YHK3 1445 aa27.92■■■□□ 2.06
CAPN12-208ENST00000597740 KCNH8Q96L42 1107 aa27.91■■■□□ 2.06
CAPN12-208ENST00000597740 MAGI3Q5TCQ9 1506 aa27.9■■■□□ 2.06
CAPN12-208ENST00000597740 CFAP43Q8NDM7 1665 aa27.87■■■□□ 2.05
CAPN12-208ENST00000597740 ABCA8O94911 1581 aa27.83■■■□□ 2.05
CAPN12-208ENST00000597740 GOLGA3Q08378 1498 aa27.83■■■□□ 2.04
CAPN12-208ENST00000597740 CTTNBP2Q8WZ74 1663 aa27.82■■■□□ 2.04
CAPN12-208ENST00000597740 CHIC1Q5VXU3 224 aa27.82■■■□□ 2.04
CAPN12-208ENST00000597740 KIF21BO75037 1637 aa27.8■■■□□ 2.04
CAPN12-208ENST00000597740 ARID3CA6NKF2 412 aa27.71■■■□□ 2.03
CAPN12-208ENST00000597740 ARAP3Q8WWN8 1544 aa27.69■■■□□ 2.02
CAPN12-208ENST00000597740 FBXO41Q8TF61 875 aa27.66■■■□□ 2.02
CAPN12-208ENST00000597740 PTPRMP28827 1452 aa27.62■■■□□ 2.01
CAPN12-208ENST00000597740 ATP10BO94823 1461 aa27.61■■■□□ 2.01
CAPN12-208ENST00000597740 PRXQ9BXM0 1461 aa27.6■■■□□ 2.01
CAPN12-208ENST00000597740 P3H3Q8IVL6 736 aa27.6■■■□□ 2.01
CAPN12-208ENST00000597740 FAM9AQ8IZU1 332 aaPredicted RBP27.6■■■□□ 2.01
CAPN12-208ENST00000597740 ADAMTSL3P82987 1691 aa27.57■■■□□ 2
CAPN12-208ENST00000597740 RAPGEF3O95398 923 aa27.57■■■□□ 2
CAPN12-208ENST00000597740 PHLDB1Q86UU1 1377 aa27.57■■■□□ 2
CAPN12-208ENST00000597740 ABCA9Q8IUA7 1624 aa27.56■■■□□ 2
CAPN12-208ENST00000597740 ARID4BQ4LE39 1312 aaPredicted RBP27.5■■□□□ 1.99
CAPN12-208ENST00000597740 NEO1Q92859 1461 aa27.49■■□□□ 1.99
CAPN12-208ENST00000597740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.47■■□□□ 1.99
CAPN12-208ENST00000597740 HNRNPUL2Q1KMD3 747 aaKnown RBP27.47■■□□□ 1.99
CAPN12-208ENST00000597740 MADDQ8WXG6 1647 aa27.46■■□□□ 1.99
CAPN12-208ENST00000597740 BCORL1Q5H9F3 1711 aa27.46■■□□□ 1.99
CAPN12-208ENST00000597740 PCF11O94913 1555 aaKnown RBP27.45■■□□□ 1.99
CAPN12-208ENST00000597740 FRMPD1Q5SYB0 1578 aa27.45■■□□□ 1.99
CAPN12-208ENST00000597740 RAPGEF6Q8TEU7 1601 aa27.42■■□□□ 1.98
CAPN12-208ENST00000597740 LMTK3Q96Q04 1460 aa27.41■■□□□ 1.98
CAPN12-208ENST00000597740 SAMD9Q5K651 1589 aa27.39■■□□□ 1.98
CAPN12-208ENST00000597740 RIMS1Q86UR5 1692 aaKnown RBP27.34■■□□□ 1.97
CAPN12-208ENST00000597740 ARHGEF40Q8TER5 1519 aa27.34■■□□□ 1.97
CAPN12-208ENST00000597740 NUP153P49790 1475 aaKnown RBP27.33■■□□□ 1.97
CAPN12-208ENST00000597740 DENND4BO75064 1496 aaPredicted RBP27.32■■□□□ 1.96
CAPN12-208ENST00000597740 PLPPR3Q6T4P5 718 aa27.31■■□□□ 1.96
CAPN12-208ENST00000597740 RANGAP1P46060 587 aaPredicted RBP27.3■■□□□ 1.96
CAPN12-208ENST00000597740 HSPA2P54652 639 aa27.3■■□□□ 1.96
CAPN12-208ENST00000597740 RICTORQ6R327 1708 aa27.27■■□□□ 1.96
CAPN12-208ENST00000597740 CSRNP3Q8WYN3 585 aa27.27■■□□□ 1.96
CAPN12-208ENST00000597740 AKNAQ7Z591 1439 aa27.26■■□□□ 1.95
CAPN12-208ENST00000597740 PLEKHD1A6NEE1 506 aa27.26■■□□□ 1.95
CAPN12-208ENST00000597740 FANCAO15360 1455 aa27.25■■□□□ 1.95
CAPN12-208ENST00000597740 FHOD3Q2V2M9 1422 aa27.24■■□□□ 1.95
CAPN12-208ENST00000597740 POGZQ7Z3K3 1410 aa27.23■■□□□ 1.95
CAPN12-208ENST00000597740 CFAP74Q9C0B2 1584 aa27.22■■□□□ 1.95
CAPN12-208ENST00000597740 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.19■■□□□ 1.94
CAPN12-208ENST00000597740 EEA1Q15075 1411 aa27.18■■□□□ 1.94
CAPN12-208ENST00000597740 YEATS2Q9ULM3 1422 aa27.18■■□□□ 1.94
CAPN12-208ENST00000597740 ZMYM4Q5VZL5 1548 aa27.18■■□□□ 1.94
CAPN12-208ENST00000597740 ZFYVE16Q7Z3T8 1539 aa27.18■■□□□ 1.94
CAPN12-208ENST00000597740 MLECQ14165 292 aa27.17■■□□□ 1.94
CAPN12-208ENST00000597740 TTC37Q6PGP7 1564 aa27.16■■□□□ 1.94
CAPN12-208ENST00000597740 SIGLEC1Q9BZZ2 1709 aa27.16■■□□□ 1.94
CAPN12-208ENST00000597740 EFCAB5A4FU69 1503 aa27.16■■□□□ 1.94
CAPN12-208ENST00000597740 CERKQ8TCT0 537 aa27.13■■□□□ 1.93
CAPN12-208ENST00000597740 MAGI2Q86UL8 1455 aa27.11■■□□□ 1.93
CAPN12-208ENST00000597740 HECW1Q76N89 1606 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms