RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 PRG4Q92954 1404 aaPredicted RBP24.32■■□□□ 1.48
IRF3-218ENST00000597369 TSPOAP1O95153 1857 aa24.27■■□□□ 1.48
IRF3-218ENST00000597369 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
IRF3-218ENST00000597369 JPH4Q96JJ6 628 aa24.25■■□□□ 1.47
IRF3-218ENST00000597369 HECW2Q9P2P5 1572 aa24.22■■□□□ 1.47
IRF3-218ENST00000597369 ADGRL1O94910 1474 aa24.2■■□□□ 1.47
IRF3-218ENST00000597369 ADCY10Q96PN6 1610 aa24.19■■□□□ 1.46
IRF3-218ENST00000597369 FBXO41Q8TF61 875 aa24.13■■□□□ 1.45
IRF3-218ENST00000597369 ERICH3Q5RHP9 1530 aa24.13■■□□□ 1.45
IRF3-218ENST00000597369 WRNQ14191 1432 aaPredicted RBP eCLIP24.12■■□□□ 1.45
IRF3-218ENST00000597369 RUSC2Q8N2Y8 1516 aa24.04■■□□□ 1.44
IRF3-218ENST00000597369 PPRC1Q5VV67 1664 aaKnown RBP24.01■■□□□ 1.43
IRF3-218ENST00000597369 GLI2P10070 1586 aa23.96■■□□□ 1.43
IRF3-218ENST00000597369 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
IRF3-218ENST00000597369 COL17A1Q9UMD9 1497 aaPredicted RBP23.92■■□□□ 1.42
IRF3-218ENST00000597369 TOP2BQ02880 1626 aa23.92■■□□□ 1.42
IRF3-218ENST00000597369 PLB1Q6P1J6 1458 aa23.87■■□□□ 1.41
IRF3-218ENST00000597369 ASXL2Q76L83 1435 aa23.84■■□□□ 1.41
IRF3-218ENST00000597369 KIAA0586Q9BVV6 1533 aa23.84■■□□□ 1.41
IRF3-218ENST00000597369 ABCC2Q92887 1545 aa23.84■■□□□ 1.41
IRF3-218ENST00000597369 PTPRGP23470 1445 aa23.8■■□□□ 1.4
IRF3-218ENST00000597369 MAP3K4Q9Y6R4 1608 aa23.77■■□□□ 1.4
IRF3-218ENST00000597369 TEX14Q8IWB6 1497 aa23.76■■□□□ 1.39
IRF3-218ENST00000597369 LMTK3Q96Q04 1460 aa23.75■■□□□ 1.39
IRF3-218ENST00000597369 CUL7Q14999 1698 aa23.71■■□□□ 1.39
IRF3-218ENST00000597369 EPRSP07814 1512 aaKnown RBP23.7■■□□□ 1.38
IRF3-218ENST00000597369 UHRF1BP1LA0JNW5 1464 aa23.7■■□□□ 1.38
IRF3-218ENST00000597369 TNIKQ9UKE5 1360 aa23.68■■□□□ 1.38
IRF3-218ENST00000597369 CARMIL2Q6F5E8 1435 aa23.62■■□□□ 1.37
IRF3-218ENST00000597369 TTBK1Q5TCY1 1321 aaPredicted RBP23.59■■□□□ 1.37
IRF3-218ENST00000597369 UACAQ9BZF9 1416 aa23.59■■□□□ 1.37
IRF3-218ENST00000597369 KDM5BQ9UGL1 1544 aa23.59■■□□□ 1.37
IRF3-218ENST00000597369 SOCS7O14512 581 aa23.59■■□□□ 1.37
IRF3-218ENST00000597369 IGF1RP08069 1367 aa23.56■■□□□ 1.36
IRF3-218ENST00000597369 KIF21BO75037 1637 aa23.5■■□□□ 1.35
IRF3-218ENST00000597369 ZCCHC11Q5TAX3 1644 aaKnown RBP23.5■■□□□ 1.35
IRF3-218ENST00000597369 ILDR2Q71H61 639 aa23.49■■□□□ 1.35
IRF3-218ENST00000597369 PTPRMP28827 1452 aa23.49■■□□□ 1.35
IRF3-218ENST00000597369 MAGI3Q5TCQ9 1506 aa23.49■■□□□ 1.35
IRF3-218ENST00000597369 ADAMTSL3P82987 1691 aa23.44■■□□□ 1.34
IRF3-218ENST00000597369 WDR7Q9Y4E6 1490 aa23.43■■□□□ 1.34
IRF3-218ENST00000597369 CFAP43Q8NDM7 1665 aa23.43■■□□□ 1.34
IRF3-218ENST00000597369 PCF11O94913 1555 aaKnown RBP23.43■■□□□ 1.34
IRF3-218ENST00000597369 IQGAP2Q13576 1575 aa23.43■■□□□ 1.34
IRF3-218ENST00000597369 DISP1Q96F81 1524 aa23.42■■□□□ 1.34
IRF3-218ENST00000597369 CD109Q6YHK3 1445 aa23.42■■□□□ 1.34
IRF3-218ENST00000597369 KIF27Q86VH2 1401 aa23.4■■□□□ 1.34
IRF3-218ENST00000597369 DISP3Q9P2K9 1392 aa23.4■■□□□ 1.34
IRF3-218ENST00000597369 CARMIL1Q5VZK9 1371 aa23.36■■□□□ 1.33
IRF3-218ENST00000597369 CERKQ8TCT0 537 aa23.35■■□□□ 1.33
IRF3-218ENST00000597369 ARAP3Q8WWN8 1544 aa23.34■■□□□ 1.33
IRF3-218ENST00000597369 BCORL1Q5H9F3 1711 aa23.27■■□□□ 1.32
IRF3-218ENST00000597369 UGGT2Q9NYU1 1516 aa23.27■■□□□ 1.32
IRF3-218ENST00000597369 KCNH8Q96L42 1107 aa23.25■■□□□ 1.31
IRF3-218ENST00000597369 MADDQ8WXG6 1647 aa23.23■■□□□ 1.31
IRF3-218ENST00000597369 KIAA0556O60303 1618 aa23.22■■□□□ 1.31
IRF3-218ENST00000597369 PHLDB1Q86UU1 1377 aa23.21■■□□□ 1.31
IRF3-218ENST00000597369 HSPA2P54652 639 aa23.18■■□□□ 1.3
IRF3-218ENST00000597369 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
IRF3-218ENST00000597369 SPATA31D1Q6ZQQ2 1576 aa23.13■■□□□ 1.29
IRF3-218ENST00000597369 RIMS1Q86UR5 1692 aaKnown RBP23.12■■□□□ 1.29
IRF3-218ENST00000597369 ARID4BQ4LE39 1312 aaPredicted RBP23.11■■□□□ 1.29
IRF3-218ENST00000597369 ABCA8O94911 1581 aa23.1■■□□□ 1.29
IRF3-218ENST00000597369 RAPGEF3O95398 923 aa23.1■■□□□ 1.29
IRF3-218ENST00000597369 NEO1Q92859 1461 aa23.04■■□□□ 1.28
IRF3-218ENST00000597369 ABCA9Q8IUA7 1624 aa23.03■■□□□ 1.28
IRF3-218ENST00000597369 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.28
IRF3-218ENST00000597369 FRMPD1Q5SYB0 1578 aa23.01■■□□□ 1.27
IRF3-218ENST00000597369 GOLGA3Q08378 1498 aa22.98■■□□□ 1.27
IRF3-218ENST00000597369 ARHGEF40Q8TER5 1519 aa22.96■■□□□ 1.27
IRF3-218ENST00000597369 DMRT2Q9Y5R5 561 aa22.95■■□□□ 1.26
IRF3-218ENST00000597369 POGZQ7Z3K3 1410 aa22.93■■□□□ 1.26
IRF3-218ENST00000597369 YEATS2Q9ULM3 1422 aa22.92■■□□□ 1.26
IRF3-218ENST00000597369 ATP10BO94823 1461 aa22.91■■□□□ 1.26
IRF3-218ENST00000597369 PLPPR3Q6T4P5 718 aa22.9■■□□□ 1.26
IRF3-218ENST00000597369 STRCQ7RTU9 1775 aa22.89■■□□□ 1.26
IRF3-218ENST00000597369 FANCAO15360 1455 aa22.89■■□□□ 1.25
IRF3-218ENST00000597369 CTTNBP2Q8WZ74 1663 aa22.89■■□□□ 1.25
IRF3-218ENST00000597369 RICTORQ6R327 1708 aa22.88■■□□□ 1.25
IRF3-218ENST00000597369 TTC37Q6PGP7 1564 aa22.87■■□□□ 1.25
IRF3-218ENST00000597369 PREX1Q8TCU6 1659 aa22.87■■□□□ 1.25
IRF3-218ENST00000597369 AKNAQ7Z591 1439 aa22.84■■□□□ 1.25
IRF3-218ENST00000597369 FER1L4A9Z1Z3 1794 aa22.84■■□□□ 1.25
IRF3-218ENST00000597369 DENND4BO75064 1496 aaPredicted RBP22.84■■□□□ 1.25
IRF3-218ENST00000597369 FHOD3Q2V2M9 1422 aa22.83■■□□□ 1.25
IRF3-218ENST00000597369 SIGLEC1Q9BZZ2 1709 aa22.82■■□□□ 1.24
IRF3-218ENST00000597369 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
IRF3-218ENST00000597369 SETD1BQ9UPS6 1966 aaKnown RBP22.8■■□□□ 1.24
IRF3-218ENST00000597369 IQSEC2Q5JU85 1478 aa22.79■■□□□ 1.24
IRF3-218ENST00000597369 ZMYM4Q5VZL5 1548 aa22.78■■□□□ 1.24
IRF3-218ENST00000597369 ARID3CA6NKF2 412 aa22.78■■□□□ 1.24
IRF3-218ENST00000597369 PTPRTO14522 1441 aa22.76■■□□□ 1.23
IRF3-218ENST00000597369 MAGI2Q86UL8 1455 aa22.76■■□□□ 1.23
IRF3-218ENST00000597369 EFCAB5A4FU69 1503 aa22.75■■□□□ 1.23
IRF3-218ENST00000597369 ZFYVE16Q7Z3T8 1539 aa22.74■■□□□ 1.23
IRF3-218ENST00000597369 LTBP4Q8N2S1 1624 aa22.74■■□□□ 1.23
IRF3-218ENST00000597369 MLECQ14165 292 aa22.72■■□□□ 1.23
IRF3-218ENST00000597369 ARHGEF12Q9NZN5 1544 aa22.72■■□□□ 1.23
IRF3-218ENST00000597369 CFAP74Q9C0B2 1584 aa22.7■■□□□ 1.22
IRF3-218ENST00000597369 UHRF1BP1Q6BDS2 1440 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms