RNA–Protein interactions for RNA: ENST00000596559.5

ZNF28-208, Transcript of zinc finger protein 28, humanhuman

TSL 5

Gene ZNF28, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-208ENST00000596559 C7P10643 843 aa7.21□□□□□ -1.26
ZNF28-208ENST00000596559 FAM163AQ96GL9 167 aaPredicted RBP7.21□□□□□ -1.26
ZNF28-208ENST00000596559 STAG3Q9UJ98 1225 aa7.2□□□□□ -1.26
ZNF28-208ENST00000596559 MS4A3Q96HJ5 214 aa7.18□□□□□ -1.26
ZNF28-208ENST00000596559 SCUBE2Q9NQ36 999 aa7.16□□□□□ -1.26
ZNF28-208ENST00000596559 MNX1P50219 401 aaPredicted RBP7.15□□□□□ -1.26
ZNF28-208ENST00000596559 NPM1P06748 294 aaKnown RBP eCLIP7.14□□□□□ -1.27
ZNF28-208ENST00000596559 POTEFA5A3E0 1075 aa7.11□□□□□ -1.27
ZNF28-208ENST00000596559 ATN1P54259 1190 aaPredicted RBP7.11□□□□□ -1.27
ZNF28-208ENST00000596559 CDAN1Q8IWY9 1227 aa7.11□□□□□ -1.27
ZNF28-208ENST00000596559 BMP2KQ9NSY1 1161 aaPredicted RBP7.04□□□□□ -1.28
ZNF28-208ENST00000596559 CCDC61Q9Y6R9 512 aa7.02□□□□□ -1.29
ZNF28-208ENST00000596559 KIF12Q96FN5 646 aa7.01□□□□□ -1.29
ZNF28-208ENST00000596559 TRPC6Q9Y210 931 aa7.01□□□□□ -1.29
ZNF28-208ENST00000596559 SPDYE4A6NLX3 237 aa7□□□□□ -1.29
ZNF28-208ENST00000596559 TSPYL2Q9H2G4 693 aaPredicted RBP7□□□□□ -1.29
ZNF28-208ENST00000596559 COLQQ9Y215 455 aaPredicted RBP6.99□□□□□ -1.29
ZNF28-208ENST00000596559 MMRN1Q13201 1228 aa6.98□□□□□ -1.29
ZNF28-208ENST00000596559 ST18O60284 1047 aa6.97□□□□□ -1.29
ZNF28-208ENST00000596559 TIE1P35590 1138 aa6.97□□□□□ -1.29
ZNF28-208ENST00000596559 SPNS2Q8IVW8 549 aa6.96□□□□□ -1.3
ZNF28-208ENST00000596559 SEC24BO95487 1268 aa6.94□□□□□ -1.3
ZNF28-208ENST00000596559 TTLL13PA6NNM8 815 aa6.93□□□□□ -1.3
ZNF28-208ENST00000596559 MAP3K13O43283 966 aa6.93□□□□□ -1.3
ZNF28-208ENST00000596559 SLAIN1Q8ND83 568 aa6.92□□□□□ -1.3
ZNF28-208ENST00000596559 IER5LQ5T953 404 aa6.9□□□□□ -1.3
ZNF28-208ENST00000596559 TRIM35Q9UPQ4 493 aa6.88□□□□□ -1.31
ZNF28-208ENST00000596559 TMEM121BQ9BXQ6 578 aaPredicted RBP6.86□□□□□ -1.31
ZNF28-208ENST00000596559 RASEFQ8IZ41 740 aa6.85□□□□□ -1.31
ZNF28-208ENST00000596559 SGIP1Q9BQI5 828 aa6.81□□□□□ -1.32
ZNF28-208ENST00000596559 PLCG2P16885 1265 aa6.8□□□□□ -1.32
ZNF28-208ENST00000596559 PROM2Q8N271 834 aa6.8□□□□□ -1.32
ZNF28-208ENST00000596559 CSRNP3Q8WYN3 585 aa6.8□□□□□ -1.32
ZNF28-208ENST00000596559 MARVELD3Q96A59 401 aa6.8□□□□□ -1.32
ZNF28-208ENST00000596559 PCDHB13Q9Y5F0 798 aa6.79□□□□□ -1.32
ZNF28-208ENST00000596559 IRX5P78411 483 aaPredicted RBP6.78□□□□□ -1.32
ZNF28-208ENST00000596559 SNPHO15079 494 aa6.77□□□□□ -1.33
ZNF28-208ENST00000596559 IFNL1Q8IU54 200 aa6.75□□□□□ -1.33
ZNF28-208ENST00000596559 TMEM106CQ9BVX2 250 aa6.75□□□□□ -1.33
ZNF28-208ENST00000596559 KRTAP3-3Q9BYR6 98 aa6.75□□□□□ -1.33
ZNF28-208ENST00000596559 KRTAP3-2Q9BYR7 98 aa6.75□□□□□ -1.33
ZNF28-208ENST00000596559 PLEKHG5O94827 1062 aa6.72□□□□□ -1.33
ZNF28-208ENST00000596559 MIER1Q8N108 512 aa6.72□□□□□ -1.33
ZNF28-208ENST00000596559 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.72□□□□□ -1.33
ZNF28-208ENST00000596559 POTEB3A0JP26 581 aa6.71□□□□□ -1.34
ZNF28-208ENST00000596559 EMP3P54852 163 aa6.71□□□□□ -1.34
ZNF28-208ENST00000596559 POTEBQ6S5H4 581 aa6.71□□□□□ -1.34
ZNF28-208ENST00000596559 OCEL1Q9H607 264 aa6.71□□□□□ -1.34
ZNF28-208ENST00000596559 HS3ST6Q96QI5 342 aa6.69□□□□□ -1.34
ZNF28-208ENST00000596559 NUBP1P53384 320 aa6.68□□□□□ -1.34
ZNF28-208ENST00000596559 FAM205CA6NFA0 338 aa6.66□□□□□ -1.34
ZNF28-208ENST00000596559 PDCD7Q8N8D1 485 aaKnown RBP6.61□□□□□ -1.35
ZNF28-208ENST00000596559 C3orf67Q6ZVT6 689 aa6.6□□□□□ -1.35
ZNF28-208ENST00000596559 PLCD3Q8N3E9 789 aa6.6□□□□□ -1.35
ZNF28-208ENST00000596559 FAM212AQ96EL1 285 aa6.6□□□□□ -1.35
ZNF28-208ENST00000596559 ZBTB47Q9UFB7 747 aaPredicted RBP6.58□□□□□ -1.36
ZNF28-208ENST00000596559 RNF166Q96A37 237 aaPredicted RBP6.57□□□□□ -1.36
ZNF28-208ENST00000596559 L3MBTL3Q96JM7 780 aaPredicted RBP6.56□□□□□ -1.36
ZNF28-208ENST00000596559 PCDHB8Q9UN66 801 aa6.55□□□□□ -1.36
ZNF28-208ENST00000596559 PYGBP11216 843 aa6.53□□□□□ -1.36
ZNF28-208ENST00000596559 HOXB3P14651 431 aaPredicted RBP6.52□□□□□ -1.37
ZNF28-208ENST00000596559 HOXB1P14653 301 aaPredicted RBP6.5□□□□□ -1.37
ZNF28-208ENST00000596559 MYT1LQ9UL68 1186 aa6.5□□□□□ -1.37
ZNF28-208ENST00000596559 MKRN3Q13064 507 aaKnown RBP6.49□□□□□ -1.37
ZNF28-208ENST00000596559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.49□□□□□ -1.37
ZNF28-208ENST00000596559 DCAF8Q5TAQ9 597 aa6.48□□□□□ -1.37
ZNF28-208ENST00000596559 ERBB3P21860 1342 aa6.48□□□□□ -1.37
ZNF28-208ENST00000596559 NISCHQ9Y2I1 1504 aa6.47□□□□□ -1.37
ZNF28-208ENST00000596559 ILDR1Q86SU0 546 aaPredicted RBP6.47□□□□□ -1.37
ZNF28-208ENST00000596559 GOLGA2Q08379 1002 aa6.46□□□□□ -1.38
ZNF28-208ENST00000596559 ZNF710Q8N1W2 664 aa6.45□□□□□ -1.38
ZNF28-208ENST00000596559 EHMT2Q96KQ7 1210 aa6.45□□□□□ -1.38
ZNF28-208ENST00000596559 DPY19L2Q6NUT2 758 aa6.44□□□□□ -1.38
ZNF28-208ENST00000596559 VARS2Q5ST30 1063 aaKnown RBP6.43□□□□□ -1.38
ZNF28-208ENST00000596559 ZNF467Q7Z7K2 595 aaPredicted RBP6.43□□□□□ -1.38
ZNF28-208ENST00000596559 DOK7Q18PE1 504 aa6.42□□□□□ -1.38
ZNF28-208ENST00000596559 PTGER2P43116 358 aa6.41□□□□□ -1.38
ZNF28-208ENST00000596559 BOLA1Q9Y3E2 137 aa6.41□□□□□ -1.38
ZNF28-208ENST00000596559 ABCC9O60706 1549 aa6.4□□□□□ -1.38
ZNF28-208ENST00000596559 PSEN1P49768 467 aa6.4□□□□□ -1.38
ZNF28-208ENST00000596559 ZNF687Q8N1G0 1237 aa6.4□□□□□ -1.38
ZNF28-208ENST00000596559 G3V3G9 751 aa6.37□□□□□ -1.39
ZNF28-208ENST00000596559 RIMBP2O15034 1052 aa6.36□□□□□ -1.39
ZNF28-208ENST00000596559 CHRM1P11229 460 aaPredicted RBP6.35□□□□□ -1.39
ZNF28-208ENST00000596559 ZSWIM6Q9HCJ5 1215 aa6.34□□□□□ -1.39
ZNF28-208ENST00000596559 GSE1Q14687 1217 aa6.33□□□□□ -1.4
ZNF28-208ENST00000596559 PDAP1Q13442 181 aaKnown RBP6.32□□□□□ -1.4
ZNF28-208ENST00000596559 GPR153Q6NV75 609 aa6.32□□□□□ -1.4
ZNF28-208ENST00000596559 ANKRD13DQ6ZTN6 518 aa6.32□□□□□ -1.4
ZNF28-208ENST00000596559 CABP2Q9NPB3 220 aa6.32□□□□□ -1.4
ZNF28-208ENST00000596559 PLA2G2EQ9NZK7 142 aa6.31□□□□□ -1.4
ZNF28-208ENST00000596559 TMEM92Q6UXU6 159 aa6.29□□□□□ -1.4
ZNF28-208ENST00000596559 LSM11P83369 360 aaKnown RBP eCLIP6.28□□□□□ -1.4
ZNF28-208ENST00000596559 ZNF316A6NFI3 1004 aaPredicted RBP6.25□□□□□ -1.41
ZNF28-208ENST00000596559 ARSIQ5FYB1 569 aa6.24□□□□□ -1.41
ZNF28-208ENST00000596559 MICALL2Q8IY33 904 aa6.24□□□□□ -1.41
ZNF28-208ENST00000596559 HCSTQ9UBK5 93 aa6.23□□□□□ -1.41
ZNF28-208ENST00000596559 KLHL34Q8N239 644 aa6.21□□□□□ -1.42
ZNF28-208ENST00000596559 KHSRPQ92945 711 aaKnown RBP eCLIP6.21□□□□□ -1.42
ZNF28-208ENST00000596559 EFCAB3Q8N7B9 438 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms