RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 KIF13AQ9H1H9 1805 aa32.92■■■□□ 2.86
PDE4C-208ENST00000595343 IGF1RP08069 1367 aa32.84■■■□□ 2.85
PDE4C-208ENST00000595343 NPM1P06748 294 aaKnown RBP eCLIP32.81■■■□□ 2.84
PDE4C-208ENST00000595343 KIF27Q86VH2 1401 aa32.81■■■□□ 2.84
PDE4C-208ENST00000595343 KIAA0586Q9BVV6 1533 aa32.81■■■□□ 2.84
PDE4C-208ENST00000595343 FAM69CQ0P6D2 419 aa32.77■■■□□ 2.84
PDE4C-208ENST00000595343 ABCC10Q5T3U5 1492 aa32.77■■■□□ 2.84
PDE4C-208ENST00000595343 CUL7Q14999 1698 aa32.75■■■□□ 2.83
PDE4C-208ENST00000595343 MAPKBP1O60336 1514 aa32.75■■■□□ 2.83
PDE4C-208ENST00000595343 ADCY10Q96PN6 1610 aa32.74■■■□□ 2.83
PDE4C-208ENST00000595343 DIP2BQ9P265 1576 aa32.66■■■□□ 2.82
PDE4C-208ENST00000595343 CARMIL1Q5VZK9 1371 aa32.61■■■□□ 2.81
PDE4C-208ENST00000595343 PTPRGP23470 1445 aa32.56■■■□□ 2.8
PDE4C-208ENST00000595343 TTBK1Q5TCY1 1321 aaPredicted RBP32.5■■■□□ 2.79
PDE4C-208ENST00000595343 CARMIL2Q6F5E8 1435 aa32.49■■■□□ 2.79
PDE4C-208ENST00000595343 TNIKQ9UKE5 1360 aa32.48■■■□□ 2.79
PDE4C-208ENST00000595343 KDM6BO15054 1643 aa32.44■■■□□ 2.78
PDE4C-208ENST00000595343 IQGAP2Q13576 1575 aa32.44■■■□□ 2.78
PDE4C-208ENST00000595343 TSPOAP1O95153 1857 aa32.44■■■□□ 2.78
PDE4C-208ENST00000595343 ABCC2Q92887 1545 aa32.41■■■□□ 2.78
PDE4C-208ENST00000595343 ASXL2Q76L83 1435 aa32.33■■■□□ 2.77
PDE4C-208ENST00000595343 DISP1Q96F81 1524 aa32.32■■■□□ 2.76
PDE4C-208ENST00000595343 UHRF1BP1LA0JNW5 1464 aa32.32■■■□□ 2.76
PDE4C-208ENST00000595343 PLB1Q6P1J6 1458 aa32.31■■■□□ 2.76
PDE4C-208ENST00000595343 UACAQ9BZF9 1416 aa32.3■■■□□ 2.76
PDE4C-208ENST00000595343 RAPGEF2Q9Y4G8 1499 aa32.29■■■□□ 2.76
PDE4C-208ENST00000595343 KDM4FA0A1W2PPD8 638 aa32.27■■■□□ 2.76
PDE4C-208ENST00000595343 GLI2P10070 1586 aa32.26■■■□□ 2.75
PDE4C-208ENST00000595343 UGGT2Q9NYU1 1516 aa32.23■■■□□ 2.75
PDE4C-208ENST00000595343 PPRC1Q5VV67 1664 aaKnown RBP32.2■■■□□ 2.74
PDE4C-208ENST00000595343 KDM5BQ9UGL1 1544 aa32.18■■■□□ 2.74
PDE4C-208ENST00000595343 KIAA0556O60303 1618 aa32.15■■■□□ 2.74
PDE4C-208ENST00000595343 EPRSP07814 1512 aaKnown RBP32.14■■■□□ 2.74
PDE4C-208ENST00000595343 ZCCHC11Q5TAX3 1644 aaKnown RBP32.09■■■□□ 2.73
PDE4C-208ENST00000595343 MAP3K4Q9Y6R4 1608 aa32.06■■■□□ 2.72
PDE4C-208ENST00000595343 COL17A1Q9UMD9 1497 aaPredicted RBP32.03■■■□□ 2.72
PDE4C-208ENST00000595343 TEX14Q8IWB6 1497 aa32.01■■■□□ 2.71
PDE4C-208ENST00000595343 CTTNBP2Q8WZ74 1663 aa31.99■■■□□ 2.71
PDE4C-208ENST00000595343 WDR7Q9Y4E6 1490 aa31.97■■■□□ 2.71
PDE4C-208ENST00000595343 GOLGA3Q08378 1498 aa31.95■■■□□ 2.7
PDE4C-208ENST00000595343 ADGRL1O94910 1474 aa31.93■■■□□ 2.7
PDE4C-208ENST00000595343 PRXQ9BXM0 1461 aa31.89■■■□□ 2.7
PDE4C-208ENST00000595343 ABCA8O94911 1581 aa31.88■■■□□ 2.69
PDE4C-208ENST00000595343 KCNH8Q96L42 1107 aa31.82■■■□□ 2.68
PDE4C-208ENST00000595343 CD109Q6YHK3 1445 aa31.81■■■□□ 2.68
PDE4C-208ENST00000595343 MAGI3Q5TCQ9 1506 aa31.79■■■□□ 2.68
PDE4C-208ENST00000595343 CFAP43Q8NDM7 1665 aa31.78■■■□□ 2.68
PDE4C-208ENST00000595343 P3H3Q8IVL6 736 aa31.68■■■□□ 2.66
PDE4C-208ENST00000595343 FAM9AQ8IZU1 332 aaPredicted RBP31.67■■■□□ 2.66
PDE4C-208ENST00000595343 ARID3CA6NKF2 412 aa31.65■■■□□ 2.66
PDE4C-208ENST00000595343 ATP10BO94823 1461 aa31.63■■■□□ 2.65
PDE4C-208ENST00000595343 CSRNP3Q8WYN3 585 aa31.59■■■□□ 2.65
PDE4C-208ENST00000595343 HECW2Q9P2P5 1572 aa31.56■■■□□ 2.64
PDE4C-208ENST00000595343 ARAP3Q8WWN8 1544 aa31.55■■■□□ 2.64
PDE4C-208ENST00000595343 SAMD9Q5K651 1589 aa31.55■■■□□ 2.64
PDE4C-208ENST00000595343 ILDR1Q86SU0 546 aaPredicted RBP31.54■■■□□ 2.64
PDE4C-208ENST00000595343 ABCA9Q8IUA7 1624 aa31.5■■■□□ 2.63
PDE4C-208ENST00000595343 KIF21BO75037 1637 aa31.49■■■□□ 2.63
PDE4C-208ENST00000595343 RAPGEF6Q8TEU7 1601 aa31.48■■■□□ 2.63
PDE4C-208ENST00000595343 PHLDB1Q86UU1 1377 aa31.46■■■□□ 2.63
PDE4C-208ENST00000595343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.42■■■□□ 2.62
PDE4C-208ENST00000595343 HNRNPUL2Q1KMD3 747 aaKnown RBP31.42■■■□□ 2.62
PDE4C-208ENST00000595343 EEA1Q15075 1411 aa31.39■■■□□ 2.62
PDE4C-208ENST00000595343 RAPGEF3O95398 923 aa31.38■■■□□ 2.61
PDE4C-208ENST00000595343 RANGAP1P46060 587 aaPredicted RBP31.38■■■□□ 2.61
PDE4C-208ENST00000595343 NUP153P49790 1475 aaKnown RBP31.38■■■□□ 2.61
PDE4C-208ENST00000595343 NEO1Q92859 1461 aa31.38■■■□□ 2.61
PDE4C-208ENST00000595343 FHOD3Q2V2M9 1422 aa31.34■■■□□ 2.61
PDE4C-208ENST00000595343 FRMPD1Q5SYB0 1578 aa31.26■■■□□ 2.6
PDE4C-208ENST00000595343 ADAMTSL3P82987 1691 aa31.26■■■□□ 2.6
PDE4C-208ENST00000595343 PLEKHD1A6NEE1 506 aa31.26■■■□□ 2.59
PDE4C-208ENST00000595343 PTPRMP28827 1452 aa31.24■■■□□ 2.59
PDE4C-208ENST00000595343 ARID4BQ4LE39 1312 aaPredicted RBP31.18■■■□□ 2.58
PDE4C-208ENST00000595343 EFCAB5A4FU69 1503 aa31.18■■■□□ 2.58
PDE4C-208ENST00000595343 BCORL1Q5H9F3 1711 aa31.16■■■□□ 2.58
PDE4C-208ENST00000595343 DENND4BO75064 1496 aaPredicted RBP31.15■■■□□ 2.58
PDE4C-208ENST00000595343 AKNAQ7Z591 1439 aa31.15■■■□□ 2.58
PDE4C-208ENST00000595343 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.14■■■□□ 2.58
PDE4C-208ENST00000595343 FANCAO15360 1455 aa31.14■■■□□ 2.57
PDE4C-208ENST00000595343 RICTORQ6R327 1708 aa31.11■■■□□ 2.57
PDE4C-208ENST00000595343 ARHGEF40Q8TER5 1519 aa31.11■■■□□ 2.57
PDE4C-208ENST00000595343 MADDQ8WXG6 1647 aa31.1■■■□□ 2.57
PDE4C-208ENST00000595343 CFAP74Q9C0B2 1584 aa31.09■■■□□ 2.57
PDE4C-208ENST00000595343 TTC37Q6PGP7 1564 aa31.09■■■□□ 2.57
PDE4C-208ENST00000595343 CDK13Q14004 1512 aaKnown RBP31.05■■■□□ 2.56
PDE4C-208ENST00000595343 ZMYM4Q5VZL5 1548 aa31.01■■■□□ 2.55
PDE4C-208ENST00000595343 PCF11O94913 1555 aaKnown RBP31■■■□□ 2.55
PDE4C-208ENST00000595343 RIMS1Q86UR5 1692 aaKnown RBP30.98■■■□□ 2.55
PDE4C-208ENST00000595343 ZFYVE16Q7Z3T8 1539 aa30.97■■■□□ 2.55
PDE4C-208ENST00000595343 YEATS2Q9ULM3 1422 aa30.97■■■□□ 2.55
PDE4C-208ENST00000595343 LMTK3Q96Q04 1460 aa30.96■■■□□ 2.55
PDE4C-208ENST00000595343 UBTFP17480 764 aaKnown RBP30.96■■■□□ 2.55
PDE4C-208ENST00000595343 EHMT2Q96KQ7 1210 aa30.96■■■□□ 2.55
PDE4C-208ENST00000595343 PLCH2O75038 1416 aa30.95■■■□□ 2.54
PDE4C-208ENST00000595343 POGZQ7Z3K3 1410 aa30.95■■■□□ 2.54
PDE4C-208ENST00000595343 MAGI2Q86UL8 1455 aa30.95■■■□□ 2.54
PDE4C-208ENST00000595343 FBXO41Q8TF61 875 aa30.93■■■□□ 2.54
PDE4C-208ENST00000595343 FMN1Q68DA7 1419 aa30.92■■■□□ 2.54
PDE4C-208ENST00000595343 SCAPERQ9BY12 1400 aa30.92■■■□□ 2.54
PDE4C-208ENST00000595343 ATP1B4Q9UN42 357 aaPredicted RBP30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms