RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 GRIN2BQ13224 1484 aa18.47■□□□□ 0.55
NPC1-214ENST00000593280 TTBK1Q5TCY1 1321 aaPredicted RBP18.46■□□□□ 0.55
NPC1-214ENST00000593280 EFCAB5A4FU69 1503 aa18.46■□□□□ 0.55
NPC1-214ENST00000593280 HRCP23327 699 aa18.45■□□□□ 0.54
NPC1-214ENST00000593280 ZNF608Q9ULD9 1512 aaPredicted RBP18.45■□□□□ 0.54
NPC1-214ENST00000593280 EIF4G3O43432 1585 aaKnown RBP18.45■□□□□ 0.54
NPC1-214ENST00000593280 FHAD1B1AJZ9 1412 aa18.44■□□□□ 0.54
NPC1-214ENST00000593280 SAMD9Q5K651 1589 aa18.36■□□□□ 0.53
NPC1-214ENST00000593280 SNAPC4Q5SXM2 1469 aa18.35■□□□□ 0.53
NPC1-214ENST00000593280 PCF11O94913 1555 aaKnown RBP18.32■□□□□ 0.52
NPC1-214ENST00000593280 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
NPC1-214ENST00000593280 IQGAP2Q13576 1575 aa18.31■□□□□ 0.52
NPC1-214ENST00000593280 MAGI1Q96QZ7 1491 aaPredicted RBP18.31■□□□□ 0.52
NPC1-214ENST00000593280 MAP3K1Q13233 1512 aa18.3■□□□□ 0.52
NPC1-214ENST00000593280 TIAM1Q13009 1591 aa18.3■□□□□ 0.52
NPC1-214ENST00000593280 CFAP43Q8NDM7 1665 aa18.29■□□□□ 0.52
NPC1-214ENST00000593280 P3H3Q8IVL6 736 aa18.28■□□□□ 0.52
NPC1-214ENST00000593280 FYCO1Q9BQS8 1478 aa18.27■□□□□ 0.52
NPC1-214ENST00000593280 FMN1Q68DA7 1419 aa18.26■□□□□ 0.51
NPC1-214ENST00000593280 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
NPC1-214ENST00000593280 CASKIN1Q8WXD9 1431 aa18.24■□□□□ 0.51
NPC1-214ENST00000593280 KANK4Q5T7N3 995 aaPredicted RBP18.23■□□□□ 0.51
NPC1-214ENST00000593280 SYNJ2O15056 1496 aa18.22■□□□□ 0.51
NPC1-214ENST00000593280 UGGT2Q9NYU1 1516 aa18.2■□□□□ 0.5
NPC1-214ENST00000593280 KIAA0586Q9BVV6 1533 aa18.19■□□□□ 0.5
NPC1-214ENST00000593280 LRRC9Q6ZRR7 1453 aa18.18■□□□□ 0.5
NPC1-214ENST00000593280 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
NPC1-214ENST00000593280 CEP170Q5SW79 1584 aa18.15■□□□□ 0.5
NPC1-214ENST00000593280 LRRIQ1Q96JM4 1722 aa18.13■□□□□ 0.49
NPC1-214ENST00000593280 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
NPC1-214ENST00000593280 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
NPC1-214ENST00000593280 KIAA0556O60303 1618 aa18.12■□□□□ 0.49
NPC1-214ENST00000593280 RRBP1Q9P2E9 1410 aaKnown RBP18.12■□□□□ 0.49
NPC1-214ENST00000593280 HECW1Q76N89 1606 aa18.1■□□□□ 0.49
NPC1-214ENST00000593280 NUP160Q12769 1436 aa18.1■□□□□ 0.49
NPC1-214ENST00000593280 DISP1Q96F81 1524 aa18.08■□□□□ 0.48
NPC1-214ENST00000593280 FBLN2P98095 1184 aa18.07■□□□□ 0.48
NPC1-214ENST00000593280 HNRNPUL2Q1KMD3 747 aaKnown RBP18.07■□□□□ 0.48
NPC1-214ENST00000593280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
NPC1-214ENST00000593280 CCDC18Q5T9S5 1454 aa18.05■□□□□ 0.48
NPC1-214ENST00000593280 CCNB3Q8WWL7 1395 aa18.05■□□□□ 0.48
NPC1-214ENST00000593280 CHD1O14646 1710 aa18.04■□□□□ 0.48
NPC1-214ENST00000593280 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
NPC1-214ENST00000593280 EHBP1L1Q8N3D4 1523 aa18.01■□□□□ 0.47
NPC1-214ENST00000593280 PHLDB1Q86UU1 1377 aa18.01■□□□□ 0.47
NPC1-214ENST00000593280 MTUS2Q5JR59 1369 aa17.99■□□□□ 0.47
NPC1-214ENST00000593280 SUPT6HQ7KZ85 1726 aaKnown RBP17.99■□□□□ 0.47
NPC1-214ENST00000593280 RAPGEF6Q8TEU7 1601 aa17.98■□□□□ 0.47
NPC1-214ENST00000593280 EPRSP07814 1512 aaKnown RBP17.97■□□□□ 0.47
NPC1-214ENST00000593280 CARMIL2Q6F5E8 1435 aa17.97■□□□□ 0.47
NPC1-214ENST00000593280 CDK13Q14004 1512 aaKnown RBP17.93■□□□□ 0.46
NPC1-214ENST00000593280 MAGI3Q5TCQ9 1506 aa17.93■□□□□ 0.46
NPC1-214ENST00000593280 JPH4Q96JJ6 628 aa17.92■□□□□ 0.46
NPC1-214ENST00000593280 NCOA2Q15596 1464 aa17.92■□□□□ 0.46
NPC1-214ENST00000593280 NUP153P49790 1475 aaKnown RBP17.9■□□□□ 0.46
NPC1-214ENST00000593280 ARHGEF11O15085 1522 aa17.89■□□□□ 0.45
NPC1-214ENST00000593280 FGD6Q6ZV73 1430 aa17.89■□□□□ 0.45
NPC1-214ENST00000593280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.87■□□□□ 0.45
NPC1-214ENST00000593280 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
NPC1-214ENST00000593280 MYOM3Q5VTT5 1437 aa17.86■□□□□ 0.45
NPC1-214ENST00000593280 ITGAEP38570 1179 aa17.85■□□□□ 0.45
NPC1-214ENST00000593280 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
NPC1-214ENST00000593280 PLB1Q6P1J6 1458 aa17.84■□□□□ 0.45
NPC1-214ENST00000593280 PRG4Q92954 1404 aaPredicted RBP17.83■□□□□ 0.45
NPC1-214ENST00000593280 ABCA8O94911 1581 aa17.82■□□□□ 0.44
NPC1-214ENST00000593280 ARID3CA6NKF2 412 aa17.81■□□□□ 0.44
NPC1-214ENST00000593280 PTPN23Q9H3S7 1636 aa17.81■□□□□ 0.44
NPC1-214ENST00000593280 CLASP1Q7Z460 1538 aa17.78■□□□□ 0.44
NPC1-214ENST00000593280 CDK11AQ9UQ88 783 aaPredicted RBP17.76■□□□□ 0.43
NPC1-214ENST00000593280 ADCY10Q96PN6 1610 aa17.75■□□□□ 0.43
NPC1-214ENST00000593280 TCOF1Q13428 1488 aaKnown RBP17.75■□□□□ 0.43
NPC1-214ENST00000593280 SETD5Q9C0A6 1442 aa17.75■□□□□ 0.43
NPC1-214ENST00000593280 DHX57Q6P158 1386 aaKnown RBP17.75■□□□□ 0.43
NPC1-214ENST00000593280 PTPRGP23470 1445 aa17.74■□□□□ 0.43
NPC1-214ENST00000593280 TROQ12816 1431 aaPredicted RBP17.74■□□□□ 0.43
NPC1-214ENST00000593280 RAB3GAP2Q9H2M9 1393 aa17.74■□□□□ 0.43
NPC1-214ENST00000593280 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
NPC1-214ENST00000593280 ITSN2Q9NZM3 1697 aa17.71■□□□□ 0.43
NPC1-214ENST00000593280 CLSPNQ9HAW4 1339 aa17.71■□□□□ 0.43
NPC1-214ENST00000593280 ERCC6L2Q5T890 1561 aa17.7■□□□□ 0.42
NPC1-214ENST00000593280 KIF14Q15058 1648 aa17.69■□□□□ 0.42
NPC1-214ENST00000593280 ATP10BO94823 1461 aa17.68■□□□□ 0.42
NPC1-214ENST00000593280 PTPRKQ15262 1439 aa17.66■□□□□ 0.42
NPC1-214ENST00000593280 UACAQ9BZF9 1416 aa17.66■□□□□ 0.42
NPC1-214ENST00000593280 OSCARQ8IYS5 282 aa17.65■□□□□ 0.42
NPC1-214ENST00000593280 HFM1A2PYH4 1435 aa17.64■□□□□ 0.41
NPC1-214ENST00000593280 GCC2Q8IWJ2 1684 aa17.63■□□□□ 0.41
NPC1-214ENST00000593280 ABCC2Q92887 1545 aa17.63■□□□□ 0.41
NPC1-214ENST00000593280 DNMT1P26358 1616 aaKnown RBP17.61■□□□□ 0.41
NPC1-214ENST00000593280 PLEKHD1A6NEE1 506 aa17.61■□□□□ 0.41
NPC1-214ENST00000593280 CDC42BPAQ5VT25 1732 aa17.6■□□□□ 0.41
NPC1-214ENST00000593280 GPATCH8Q9UKJ3 1502 aaKnown RBP17.59■□□□□ 0.41
NPC1-214ENST00000593280 AKNAQ7Z591 1439 aa17.59■□□□□ 0.41
NPC1-214ENST00000593280 MAPKBP1O60336 1514 aa17.58■□□□□ 0.4
NPC1-214ENST00000593280 NAIPQ13075 1403 aa17.58■□□□□ 0.4
NPC1-214ENST00000593280 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
NPC1-214ENST00000593280 ABCC10Q5T3U5 1492 aa17.57■□□□□ 0.4
NPC1-214ENST00000593280 DAPK1P53355 1430 aa17.56■□□□□ 0.4
NPC1-214ENST00000593280 UHRF1BP1LA0JNW5 1464 aa17.55■□□□□ 0.4
NPC1-214ENST00000593280 CROCC2H7BZ55 1655 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms