RNA–Protein interactions for RNA: ENST00000592874.1

U2AF2-208, Transcript of U2 small nuclear RNA auxiliary factor 2, human

TSL 5

Gene U2AF2, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF2-208	ENST00000592874	RUSC2	Q8N2Y8	1516 aa		29.73	■■■□□ 2.35
U2AF2-208	ENST00000592874	ABCC10	Q5T3U5	1492 aa		29.61	■■■□□ 2.33
U2AF2-208	ENST00000592874	FAM69C	Q0P6D2	419 aa		29.59	■■■□□ 2.33
U2AF2-208	ENST00000592874	MAPKBP1	O60336	1514 aa		29.57	■■■□□ 2.32
U2AF2-208	ENST00000592874	ADCY10	Q96PN6	1610 aa		29.56	■■■□□ 2.32
U2AF2-208	ENST00000592874	NPM1	P06748	294 aa	Known RBP eCLIP	29.53	■■■□□ 2.32
U2AF2-208	ENST00000592874	DIP2B	Q9P265	1576 aa		29.52	■■■□□ 2.32
U2AF2-208	ENST00000592874	KIAA0586	Q9BVV6	1533 aa		29.51	■■■□□ 2.32
U2AF2-208	ENST00000592874	IGF1R	P08069	1367 aa		29.5	■■■□□ 2.31
U2AF2-208	ENST00000592874	KIF27	Q86VH2	1401 aa		29.43	■■■□□ 2.3
U2AF2-208	ENST00000592874	CUL7	Q14999	1698 aa		29.41	■■■□□ 2.3
U2AF2-208	ENST00000592874	KDM6B	O15054	1643 aa		29.34	■■■□□ 2.29
U2AF2-208	ENST00000592874	PTPRG	P23470	1445 aa		29.31	■■■□□ 2.28
U2AF2-208	ENST00000592874	TTBK1	Q5TCY1	1321 aa	Predicted RBP	29.28	■■■□□ 2.28
U2AF2-208	ENST00000592874	CARMIL1	Q5VZK9	1371 aa		29.27	■■■□□ 2.28
U2AF2-208	ENST00000592874	KDM4F	A0A1W2PPD8	638 aa		29.27	■■■□□ 2.28
U2AF2-208	ENST00000592874	TSPOAP1	O95153	1857 aa		29.27	■■■□□ 2.28
U2AF2-208	ENST00000592874	TNIK	Q9UKE5	1360 aa		29.23	■■■□□ 2.27
U2AF2-208	ENST00000592874	ABCC2	Q92887	1545 aa		29.22	■■■□□ 2.27
U2AF2-208	ENST00000592874	CARMIL2	Q6F5E8	1435 aa		29.2	■■■□□ 2.27
U2AF2-208	ENST00000592874	ASXL2	Q76L83	1435 aa		29.17	■■■□□ 2.26
U2AF2-208	ENST00000592874	IQGAP2	Q13576	1575 aa		29.17	■■■□□ 2.26
U2AF2-208	ENST00000592874	PLB1	Q6P1J6	1458 aa		29.12	■■■□□ 2.25
U2AF2-208	ENST00000592874	UHRF1BP1L	A0JNW5	1464 aa		29.11	■■■□□ 2.25
U2AF2-208	ENST00000592874	DISP1	Q96F81	1524 aa		29.1	■■■□□ 2.25
U2AF2-208	ENST00000592874	PPRC1	Q5VV67	1664 aa	Known RBP	29.1	■■■□□ 2.25
U2AF2-208	ENST00000592874	GLI2	P10070	1586 aa		29.09	■■■□□ 2.25
U2AF2-208	ENST00000592874	UACA	Q9BZF9	1416 aa		29.08	■■■□□ 2.25
U2AF2-208	ENST00000592874	KDM5B	Q9UGL1	1544 aa		28.99	■■■□□ 2.23
U2AF2-208	ENST00000592874	EPRS	P07814	1512 aa	Known RBP	28.99	■■■□□ 2.23
U2AF2-208	ENST00000592874	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.98	■■■□□ 2.23
U2AF2-208	ENST00000592874	UGGT2	Q9NYU1	1516 aa		28.98	■■■□□ 2.23
U2AF2-208	ENST00000592874	RAPGEF2	Q9Y4G8	1499 aa		28.96	■■■□□ 2.23
U2AF2-208	ENST00000592874	ADGRL1	O94910	1474 aa		28.94	■■■□□ 2.22
U2AF2-208	ENST00000592874	MAP3K4	Q9Y6R4	1608 aa		28.94	■■■□□ 2.22
U2AF2-208	ENST00000592874	KIAA0556	O60303	1618 aa		28.93	■■■□□ 2.22
U2AF2-208	ENST00000592874	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.92	■■■□□ 2.22
U2AF2-208	ENST00000592874	TEX14	Q8IWB6	1497 aa		28.85	■■■□□ 2.21
U2AF2-208	ENST00000592874	WDR7	Q9Y4E6	1490 aa		28.81	■■■□□ 2.2
U2AF2-208	ENST00000592874	ILDR1	Q86SU0	546 aa	Predicted RBP	28.76	■■■□□ 2.19
U2AF2-208	ENST00000592874	CTTNBP2	Q8WZ74	1663 aa		28.7	■■■□□ 2.19
U2AF2-208	ENST00000592874	ABCA8	O94911	1581 aa		28.69	■■■□□ 2.18
U2AF2-208	ENST00000592874	GOLGA3	Q08378	1498 aa		28.67	■■■□□ 2.18
U2AF2-208	ENST00000592874	CD109	Q6YHK3	1445 aa		28.67	■■■□□ 2.18
U2AF2-208	ENST00000592874	HECW2	Q9P2P5	1572 aa		28.67	■■■□□ 2.18
U2AF2-208	ENST00000592874	MAGI3	Q5TCQ9	1506 aa		28.66	■■■□□ 2.18
U2AF2-208	ENST00000592874	KCNH8	Q96L42	1107 aa		28.64	■■■□□ 2.18
U2AF2-208	ENST00000592874	CFAP43	Q8NDM7	1665 aa		28.62	■■■□□ 2.17
U2AF2-208	ENST00000592874	PRX	Q9BXM0	1461 aa		28.59	■■■□□ 2.17
U2AF2-208	ENST00000592874	ARID3C	A6NKF2	412 aa		28.51	■■■□□ 2.15
U2AF2-208	ENST00000592874	KIF21B	O75037	1637 aa		28.47	■■■□□ 2.15
U2AF2-208	ENST00000592874	ATP10B	O94823	1461 aa		28.46	■■■□□ 2.15
U2AF2-208	ENST00000592874	ARAP3	Q8WWN8	1544 aa		28.45	■■■□□ 2.15
U2AF2-208	ENST00000592874	P3H3	Q8IVL6	736 aa		28.45	■■■□□ 2.14
U2AF2-208	ENST00000592874	ABCA9	Q8IUA7	1624 aa		28.36	■■■□□ 2.13
U2AF2-208	ENST00000592874	SAMD9	Q5K651	1589 aa		28.33	■■■□□ 2.13
U2AF2-208	ENST00000592874	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.32	■■■□□ 2.12
U2AF2-208	ENST00000592874	RAPGEF3	O95398	923 aa		28.3	■■■□□ 2.12
U2AF2-208	ENST00000592874	PHLDB1	Q86UU1	1377 aa		28.29	■■■□□ 2.12
U2AF2-208	ENST00000592874	RAPGEF6	Q8TEU7	1601 aa		28.29	■■■□□ 2.12
U2AF2-208	ENST00000592874	PTPRM	P28827	1452 aa		28.26	■■■□□ 2.11
U2AF2-208	ENST00000592874	NEO1	Q92859	1461 aa		28.26	■■■□□ 2.11
U2AF2-208	ENST00000592874	ADAMTSL3	P82987	1691 aa		28.26	■■■□□ 2.11
U2AF2-208	ENST00000592874	CSRNP3	Q8WYN3	585 aa		28.24	■■■□□ 2.11
U2AF2-208	ENST00000592874	FRMPD1	Q5SYB0	1578 aa		28.24	■■■□□ 2.11
U2AF2-208	ENST00000592874	NUP153	P49790	1475 aa	Known RBP	28.23	■■■□□ 2.11
U2AF2-208	ENST00000592874	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.22	■■■□□ 2.11
U2AF2-208	ENST00000592874	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.22	■■■□□ 2.11
U2AF2-208	ENST00000592874	FHOD3	Q2V2M9	1422 aa		28.17	■■■□□ 2.1
U2AF2-208	ENST00000592874	RANGAP1	P46060	587 aa	Predicted RBP	28.16	■■■□□ 2.1
U2AF2-208	ENST00000592874	BCORL1	Q5H9F3	1711 aa		28.14	■■■□□ 2.1
U2AF2-208	ENST00000592874	MADD	Q8WXG6	1647 aa		28.14	■■■□□ 2.09
U2AF2-208	ENST00000592874	ARID4B	Q4LE39	1312 aa	Predicted RBP	28.12	■■■□□ 2.09
U2AF2-208	ENST00000592874	FBXO41	Q8TF61	875 aa		28.09	■■■□□ 2.09
U2AF2-208	ENST00000592874	ARHGEF40	Q8TER5	1519 aa		28.08	■■■□□ 2.09
U2AF2-208	ENST00000592874	PCF11	O94913	1555 aa	Known RBP	28.07	■■■□□ 2.08
U2AF2-208	ENST00000592874	DENND4B	O75064	1496 aa	Predicted RBP	28.06	■■■□□ 2.08
U2AF2-208	ENST00000592874	LMTK3	Q96Q04	1460 aa		28.05	■■■□□ 2.08
U2AF2-208	ENST00000592874	AKNA	Q7Z591	1439 aa		28.04	■■■□□ 2.08
U2AF2-208	ENST00000592874	PLEKHD1	A6NEE1	506 aa		28.04	■■■□□ 2.08
U2AF2-208	ENST00000592874	RICTOR	Q6R327	1708 aa		28.04	■■■□□ 2.08
U2AF2-208	ENST00000592874	FANCA	O15360	1455 aa		28.03	■■■□□ 2.08
U2AF2-208	ENST00000592874	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	28.02	■■■□□ 2.08
U2AF2-208	ENST00000592874	EEA1	Q15075	1411 aa		28.02	■■■□□ 2.08
U2AF2-208	ENST00000592874	TTC37	Q6PGP7	1564 aa		28	■■■□□ 2.07
U2AF2-208	ENST00000592874	RIMS1	Q86UR5	1692 aa	Known RBP	27.99	■■■□□ 2.07
U2AF2-208	ENST00000592874	CFAP74	Q9C0B2	1584 aa		27.96	■■■□□ 2.07
U2AF2-208	ENST00000592874	YEATS2	Q9ULM3	1422 aa		27.95	■■■□□ 2.07
U2AF2-208	ENST00000592874	ZMYM4	Q5VZL5	1548 aa		27.95	■■■□□ 2.06
U2AF2-208	ENST00000592874	EFCAB5	A4FU69	1503 aa		27.94	■■■□□ 2.06
U2AF2-208	ENST00000592874	SIGLEC1	Q9BZZ2	1709 aa		27.94	■■■□□ 2.06
U2AF2-208	ENST00000592874	CDK13	Q14004	1512 aa	Known RBP	27.92	■■■□□ 2.06
U2AF2-208	ENST00000592874	ZFYVE16	Q7Z3T8	1539 aa		27.92	■■■□□ 2.06
U2AF2-208	ENST00000592874	HSPA2	P54652	639 aa		27.89	■■■□□ 2.06
U2AF2-208	ENST00000592874	PLPPR3	Q6T4P5	718 aa		27.89	■■■□□ 2.06
U2AF2-208	ENST00000592874	POGZ	Q7Z3K3	1410 aa		27.88	■■■□□ 2.05
U2AF2-208	ENST00000592874	HECW1	Q76N89	1606 aa		27.86	■■■□□ 2.05
U2AF2-208	ENST00000592874	MAGI2	Q86UL8	1455 aa		27.85	■■■□□ 2.05
U2AF2-208	ENST00000592874	PLCH2	O75038	1416 aa		27.83	■■■□□ 2.05
U2AF2-208	ENST00000592874	SCAPER	Q9BY12	1400 aa		27.83	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms