RNA–Protein interactions for RNA: ENST00000591286.5

RTN2-210, Transcript of reticulon 2, humanhuman

TSL 1 (best)

Gene RTN2, Length 2,111 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-210ENST00000591286 EFCAB5A4FU69 1503 aa39.99■■■■□ 3.99
RTN2-210ENST00000591286 THOC2Q8NI27 1593 aaKnown RBP39.97■■■■□ 3.99
RTN2-210ENST00000591286 GRIN2BQ13224 1484 aa39.92■■■■□ 3.98
RTN2-210ENST00000591286 FHAD1B1AJZ9 1412 aa39.91■■■■□ 3.98
RTN2-210ENST00000591286 KANK4Q5T7N3 995 aaPredicted RBP39.91■■■■□ 3.98
RTN2-210ENST00000591286 ZNF608Q9ULD9 1512 aaPredicted RBP39.9■■■■□ 3.98
RTN2-210ENST00000591286 ADAMTS12P58397 1594 aa39.89■■■■□ 3.98
RTN2-210ENST00000591286 MAP3K1Q13233 1512 aa39.84■■■■□ 3.97
RTN2-210ENST00000591286 FHOD3Q2V2M9 1422 aa39.83■■■■□ 3.97
RTN2-210ENST00000591286 P3H3Q8IVL6 736 aa39.82■■■■□ 3.97
RTN2-210ENST00000591286 TIAM1Q13009 1591 aa39.78■■■■□ 3.96
RTN2-210ENST00000591286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.77■■■■□ 3.96
RTN2-210ENST00000591286 PCF11O94913 1555 aaKnown RBP39.76■■■■□ 3.95
RTN2-210ENST00000591286 SAMD9Q5K651 1589 aa39.76■■■■□ 3.95
RTN2-210ENST00000591286 EIF4G3O43432 1585 aaKnown RBP39.72■■■■□ 3.95
RTN2-210ENST00000591286 FYCO1Q9BQS8 1478 aa39.67■■■■□ 3.94
RTN2-210ENST00000591286 CCER1Q8TC90 406 aaPredicted RBP39.66■■■■□ 3.94
RTN2-210ENST00000591286 CASKIN1Q8WXD9 1431 aa39.66■■■■□ 3.94
RTN2-210ENST00000591286 FMN1Q68DA7 1419 aa39.64■■■■□ 3.94
RTN2-210ENST00000591286 PELP1Q8IZL8 1130 aaKnown RBP39.64■■■■□ 3.94
RTN2-210ENST00000591286 CFAP43Q8NDM7 1665 aa39.63■■■■□ 3.93
RTN2-210ENST00000591286 HNRNPUL2Q1KMD3 747 aaKnown RBP39.62■■■■□ 3.93
RTN2-210ENST00000591286 SNAPC4Q5SXM2 1469 aa39.61■■■■□ 3.93
RTN2-210ENST00000591286 RRBP1Q9P2E9 1410 aaKnown RBP39.6■■■■□ 3.93
RTN2-210ENST00000591286 LRRC9Q6ZRR7 1453 aa39.59■■■■□ 3.93
RTN2-210ENST00000591286 IQGAP2Q13576 1575 aa39.58■■■■□ 3.93
RTN2-210ENST00000591286 MAGI1Q96QZ7 1491 aaPredicted RBP39.49■■■■□ 3.91
RTN2-210ENST00000591286 ATP1B4Q9UN42 357 aaPredicted RBP39.47■■■■□ 3.91
RTN2-210ENST00000591286 GRIN2AQ12879 1464 aa39.46■■■■□ 3.91
RTN2-210ENST00000591286 CCNB3Q8WWL7 1395 aa39.42■■■■□ 3.9
RTN2-210ENST00000591286 UGGT2Q9NYU1 1516 aa39.4■■■■□ 3.9
RTN2-210ENST00000591286 KIAA0586Q9BVV6 1533 aa39.4■■■■□ 3.9
RTN2-210ENST00000591286 SYNJ2O15056 1496 aa39.36■■■■□ 3.89
RTN2-210ENST00000591286 PHLDB1Q86UU1 1377 aa39.31■■■■□ 3.88
RTN2-210ENST00000591286 LRRIQ1Q96JM4 1722 aa39.28■■■■□ 3.88
RTN2-210ENST00000591286 CHMP7Q8WUX9 453 aaPredicted RBP39.25■■■■□ 3.87
RTN2-210ENST00000591286 CEP170Q5SW79 1584 aa39.21■■■■□ 3.87
RTN2-210ENST00000591286 DISP1Q96F81 1524 aa39.19■■■■□ 3.86
RTN2-210ENST00000591286 KIAA0556O60303 1618 aa39.18■■■■□ 3.86
RTN2-210ENST00000591286 HECW1Q76N89 1606 aa39.15■■■■□ 3.86
RTN2-210ENST00000591286 NUP160Q12769 1436 aa39.14■■■■□ 3.86
RTN2-210ENST00000591286 MTUS2Q5JR59 1369 aa39.13■■■■□ 3.86
RTN2-210ENST00000591286 CCDC18Q5T9S5 1454 aa39.13■■■■□ 3.85
RTN2-210ENST00000591286 FBLN2P98095 1184 aa39.1■■■■□ 3.85
RTN2-210ENST00000591286 EHBP1L1Q8N3D4 1523 aa39.06■■■■□ 3.84
RTN2-210ENST00000591286 EPRSP07814 1512 aaKnown RBP39.02■■■■□ 3.84
RTN2-210ENST00000591286 ITGAEP38570 1179 aa39.01■■■■□ 3.83
RTN2-210ENST00000591286 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39■■■■□ 3.83
RTN2-210ENST00000591286 MAGI3Q5TCQ9 1506 aa38.98■■■■□ 3.83
RTN2-210ENST00000591286 NCOA2Q15596 1464 aa38.97■■■■□ 3.83
RTN2-210ENST00000591286 FAM50AQ14320 339 aaKnown RBP38.97■■■■□ 3.83
RTN2-210ENST00000591286 SUPT6HQ7KZ85 1726 aaKnown RBP38.97■■■■□ 3.83
RTN2-210ENST00000591286 FGD6Q6ZV73 1430 aa38.95■■■■□ 3.83
RTN2-210ENST00000591286 DHX57Q6P158 1386 aaKnown RBP38.92■■■■□ 3.82
RTN2-210ENST00000591286 CDK13Q14004 1512 aaKnown RBP38.91■■■■□ 3.82
RTN2-210ENST00000591286 ARHGEF11O15085 1522 aa38.9■■■■□ 3.82
RTN2-210ENST00000591286 JPH4Q96JJ6 628 aa38.89■■■■□ 3.82
RTN2-210ENST00000591286 RAPGEF6Q8TEU7 1601 aa38.87■■■■□ 3.81
RTN2-210ENST00000591286 MYOM3Q5VTT5 1437 aa38.87■■■■□ 3.81
RTN2-210ENST00000591286 CARMIL2Q6F5E8 1435 aa38.86■■■■□ 3.81
RTN2-210ENST00000591286 CLSPNQ9HAW4 1339 aa38.85■■■■□ 3.81
RTN2-210ENST00000591286 NUP153P49790 1475 aaKnown RBP38.84■■■■□ 3.81
RTN2-210ENST00000591286 RAB3GAP2Q9H2M9 1393 aa38.8■■■■□ 3.8
RTN2-210ENST00000591286 SETD5Q9C0A6 1442 aa38.79■■■■□ 3.8
RTN2-210ENST00000591286 CHD1O14646 1710 aa38.74■■■■□ 3.79
RTN2-210ENST00000591286 ARID3CA6NKF2 412 aa38.73■■■■□ 3.79
RTN2-210ENST00000591286 PLB1Q6P1J6 1458 aa38.69■■■■□ 3.78
RTN2-210ENST00000591286 PTPN23Q9H3S7 1636 aa38.67■■■■□ 3.78
RTN2-210ENST00000591286 TCOF1Q13428 1488 aaKnown RBP38.62■■■■□ 3.77
RTN2-210ENST00000591286 PTPRKQ15262 1439 aa38.58■■■■□ 3.77
RTN2-210ENST00000591286 CDK11AQ9UQ88 783 aaPredicted RBP38.58■■■■□ 3.77
RTN2-210ENST00000591286 PRG4Q92954 1404 aaPredicted RBP38.58■■■■□ 3.77
RTN2-210ENST00000591286 MIA2Q96PC5 1412 aa38.57■■■■□ 3.77
RTN2-210ENST00000591286 ABCA8O94911 1581 aa38.57■■■■□ 3.76
RTN2-210ENST00000591286 TROQ12816 1431 aaPredicted RBP38.5■■■■□ 3.75
RTN2-210ENST00000591286 SHROOM2Q13796 1616 aa38.49■■■■□ 3.75
RTN2-210ENST00000591286 HFM1A2PYH4 1435 aa38.48■■■■□ 3.75
RTN2-210ENST00000591286 MAPKBP1O60336 1514 aa38.47■■■■□ 3.75
RTN2-210ENST00000591286 PTPRGP23470 1445 aa38.42■■■■□ 3.74
RTN2-210ENST00000591286 ADCY10Q96PN6 1610 aa38.39■■■■□ 3.74
RTN2-210ENST00000591286 NAIPQ13075 1403 aa38.37■■■■□ 3.73
RTN2-210ENST00000591286 ATP10BO94823 1461 aa38.36■■■■□ 3.73
RTN2-210ENST00000591286 ZNF316A6NFI3 1004 aaPredicted RBP38.33■■■■□ 3.73
RTN2-210ENST00000591286 KIF14Q15058 1648 aa38.31■■■■□ 3.72
RTN2-210ENST00000591286 MYT1Q01538 1121 aa38.3■■■■□ 3.72
RTN2-210ENST00000591286 CLASP1Q7Z460 1538 aa38.29■■■■□ 3.72
RTN2-210ENST00000591286 AKNAQ7Z591 1439 aa38.29■■■■□ 3.72
RTN2-210ENST00000591286 ITSN2Q9NZM3 1697 aa38.25■■■■□ 3.71
RTN2-210ENST00000591286 PLEKHD1A6NEE1 506 aa38.24■■■■□ 3.71
RTN2-210ENST00000591286 GPATCH8Q9UKJ3 1502 aaKnown RBP38.24■■■■□ 3.71
RTN2-210ENST00000591286 GCC2Q8IWJ2 1684 aa38.23■■■■□ 3.71
RTN2-210ENST00000591286 ERCC6L2Q5T890 1561 aa38.23■■■■□ 3.71
RTN2-210ENST00000591286 UACAQ9BZF9 1416 aa38.21■■■■□ 3.71
RTN2-210ENST00000591286 DNMT1P26358 1616 aaKnown RBP38.2■■■■□ 3.71
RTN2-210ENST00000591286 DAPK1P53355 1430 aa38.2■■■■□ 3.71
RTN2-210ENST00000591286 CHIC2Q9UKJ5 165 aa38.2■■■■□ 3.71
RTN2-210ENST00000591286 ZNF644Q9H582 1327 aaPredicted RBP38.18■■■■□ 3.7
RTN2-210ENST00000591286 SCAF1Q9H7N4 1312 aaKnown RBP38.18■■■■□ 3.7
RTN2-210ENST00000591286 RRP7BPQ9NSQ0 103 aa38.17■■■■□ 3.7
RTN2-210ENST00000591286 ABCC5O15440 1437 aa38.16■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms