RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 BCL11AQ9H165 835 aa21.11■□□□□ 0.97
PTPRS-206ENST00000588552 SOGA1O94964 1423 aa21.1■□□□□ 0.97
PTPRS-206ENST00000588552 ACIN1Q9UKV3 1341 aaKnown RBP21.09■□□□□ 0.97
PTPRS-206ENST00000588552 FAM9BQ8IZU0 186 aa21.08■□□□□ 0.97
PTPRS-206ENST00000588552 HNRNPUQ00839 825 aaKnown RBP eCLIP21.06■□□□□ 0.96
PTPRS-206ENST00000588552 EIF4G1Q04637 1599 aaKnown RBP21.03■□□□□ 0.96
PTPRS-206ENST00000588552 TMC1Q8TDI8 760 aa21.02■□□□□ 0.96
PTPRS-206ENST00000588552 PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.96
PTPRS-206ENST00000588552 HIRIP3Q9BW71 556 aaPredicted RBP21■□□□□ 0.95
PTPRS-206ENST00000588552 ABCC8Q09428 1581 aa21■□□□□ 0.95
PTPRS-206ENST00000588552 EIF4G2P78344 907 aaKnown RBP eCLIP21■□□□□ 0.951e-7■■■■■ 32.2
PTPRS-206ENST00000588552 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
PTPRS-206ENST00000588552 SALL2Q9Y467 1007 aaPredicted RBP20.97■□□□□ 0.95
PTPRS-206ENST00000588552 RGL3Q3MIN7 710 aa20.96■□□□□ 0.95
PTPRS-206ENST00000588552 TOP2AP11388 1531 aaKnown RBP20.95■□□□□ 0.94
PTPRS-206ENST00000588552 WIZO95785 1651 aa20.95■□□□□ 0.94
PTPRS-206ENST00000588552 PPP1R15AO75807 674 aaPredicted RBP20.95■□□□□ 0.94
PTPRS-206ENST00000588552 SENP3Q9H4L4 574 aaPredicted RBP20.95■□□□□ 0.94
PTPRS-206ENST00000588552 MRS2Q9HD23 443 aa20.92■□□□□ 0.94
PTPRS-206ENST00000588552 CCNB3Q8WWL7 1395 aa20.92■□□□□ 0.94
PTPRS-206ENST00000588552 WDR43Q15061 677 aaKnown RBP eCLIP20.92■□□□□ 0.94
PTPRS-206ENST00000588552 ARID4BQ4LE39 1312 aaPredicted RBP20.91■□□□□ 0.94
PTPRS-206ENST00000588552 FKBP8Q14318 412 aa20.89■□□□□ 0.94
PTPRS-206ENST00000588552 TDRD9Q8NDG6 1382 aaKnown RBP20.87■□□□□ 0.93
PTPRS-206ENST00000588552 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
PTPRS-206ENST00000588552 ATAD2BQ9ULI0 1458 aa20.82■□□□□ 0.92
PTPRS-206ENST00000588552 MIER1Q8N108 512 aa20.82■□□□□ 0.92
PTPRS-206ENST00000588552 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
PTPRS-206ENST00000588552 CARMIL2Q6F5E8 1435 aa20.78■□□□□ 0.92
PTPRS-206ENST00000588552 VPS8Q8N3P4 1428 aa20.78■□□□□ 0.92
PTPRS-206ENST00000588552 SMARCA4P51532 1647 aa20.77■□□□□ 0.92
PTPRS-206ENST00000588552 CARD11Q9BXL7 1154 aa20.77■□□□□ 0.92
PTPRS-206ENST00000588552 SIN3AQ96ST3 1273 aa20.77■□□□□ 0.91
PTPRS-206ENST00000588552 ANP32AP39687 249 aaKnown RBP20.76■□□□□ 0.91
PTPRS-206ENST00000588552 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.75■□□□□ 0.91
PTPRS-206ENST00000588552 C14orf37Q86TY3 774 aa20.74■□□□□ 0.91
PTPRS-206ENST00000588552 CDCA8Q53HL2 280 aa20.73■□□□□ 0.91
PTPRS-206ENST00000588552 NPM2Q86SE8 214 aaKnown RBP20.73■□□□□ 0.91
PTPRS-206ENST00000588552 ARHGAP35Q9NRY4 1499 aa20.7■□□□□ 0.9
PTPRS-206ENST00000588552 KANK4Q5T7N3 995 aaPredicted RBP20.69■□□□□ 0.9
PTPRS-206ENST00000588552 ZBTB7CA1YPR0 619 aa20.68■□□□□ 0.9
PTPRS-206ENST00000588552 PLEKHG5O94827 1062 aa20.68■□□□□ 0.9
PTPRS-206ENST00000588552 FMN1Q68DA7 1419 aa20.67■□□□□ 0.9
PTPRS-206ENST00000588552 KNSTRNQ9Y448 316 aa20.66■□□□□ 0.9
PTPRS-206ENST00000588552 CCDC136Q96JN2 1154 aa20.66■□□□□ 0.9
PTPRS-206ENST00000588552 KANK1Q14678 1352 aa20.65■□□□□ 0.9
PTPRS-206ENST00000588552 RAPGEF2Q9Y4G8 1499 aa20.63■□□□□ 0.89
PTPRS-206ENST00000588552 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
PTPRS-206ENST00000588552 CFAP53Q96M91 514 aa20.6■□□□□ 0.89
PTPRS-206ENST00000588552 POGKQ9P215 609 aa20.6■□□□□ 0.89
PTPRS-206ENST00000588552 UPF2Q9HAU5 1272 aaKnown RBP20.6■□□□□ 0.89
PTPRS-206ENST00000588552 SETD5Q9C0A6 1442 aa20.6■□□□□ 0.89
PTPRS-206ENST00000588552 DCAF11Q8TEB1 546 aa20.59■□□□□ 0.89
PTPRS-206ENST00000588552 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.89
PTPRS-206ENST00000588552 MLECQ14165 292 aa20.57■□□□□ 0.88
PTPRS-206ENST00000588552 IRX6P78412 446 aaPredicted RBP20.54■□□□□ 0.88
PTPRS-206ENST00000588552 A0A0G2JS52 829 aa20.54■□□□□ 0.88
PTPRS-206ENST00000588552 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
PTPRS-206ENST00000588552 FHOD3Q2V2M9 1422 aa20.53■□□□□ 0.88
PTPRS-206ENST00000588552 HSP90AA1P07900 732 aaKnown RBP20.53■□□□□ 0.88
PTPRS-206ENST00000588552 EFCAB2Q5VUJ9 269 aa20.53■□□□□ 0.88
PTPRS-206ENST00000588552 GGT6Q6P531 493 aa20.52■□□□□ 0.88
PTPRS-206ENST00000588552 TIMELESSQ9UNS1 1208 aa20.52■□□□□ 0.87
PTPRS-206ENST00000588552 PKD2Q13563 968 aa20.51■□□□□ 0.87
PTPRS-206ENST00000588552 HAP1P54257 671 aaPredicted RBP20.49■□□□□ 0.87
PTPRS-206ENST00000588552 JPH4Q96JJ6 628 aa20.49■□□□□ 0.87
PTPRS-206ENST00000588552 SENP3-EIF4A1A0A087X0R7 540 aa20.48■□□□□ 0.87
PTPRS-206ENST00000588552 MYH16Q9H6N6 1097 aa20.47■□□□□ 0.87
PTPRS-206ENST00000588552 TMF1P82094 1093 aa20.46■□□□□ 0.87
PTPRS-206ENST00000588552 HDGFP51858 240 aaKnown RBP20.45■□□□□ 0.86
PTPRS-206ENST00000588552 FOXD1Q16676 465 aa20.45■□□□□ 0.86
PTPRS-206ENST00000588552 ANKRD30AQ9BXX3 1397 aa20.44■□□□□ 0.86
PTPRS-206ENST00000588552 CC2D1BQ5T0F9 858 aaKnown RBP20.43■□□□□ 0.86
PTPRS-206ENST00000588552 RUSC2Q8N2Y8 1516 aa20.42■□□□□ 0.86
PTPRS-206ENST00000588552 RAB3GAP2Q9H2M9 1393 aa20.42■□□□□ 0.86
PTPRS-206ENST00000588552 NUDCQ9Y266 331 aa20.42■□□□□ 0.86
PTPRS-206ENST00000588552 TNNT2P45379 298 aaPredicted RBP20.42■□□□□ 0.86
PTPRS-206ENST00000588552 LMOD2Q6P5Q4 547 aa20.41■□□□□ 0.86
PTPRS-206ENST00000588552 NUP155O75694 1391 aa20.41■□□□□ 0.86
PTPRS-206ENST00000588552 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
PTPRS-206ENST00000588552 NEUROD2Q15784 382 aa20.4■□□□□ 0.86
PTPRS-206ENST00000588552 MAPK8IP3Q9UPT6 1336 aa20.4■□□□□ 0.86
PTPRS-206ENST00000588552 HNRNPMP52272 730 aaKnown RBP eCLIP20.39■□□□□ 0.85
PTPRS-206ENST00000588552 CCDC18Q5T9S5 1454 aa20.39■□□□□ 0.85
PTPRS-206ENST00000588552 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
PTPRS-206ENST00000588552 HSPA5P11021 654 aaKnown RBP20.35■□□□□ 0.85
PTPRS-206ENST00000588552 SAFB2Q14151 953 aaKnown RBP eCLIP20.34■□□□□ 0.85
PTPRS-206ENST00000588552 NCAPD3P42695 1498 aa20.34■□□□□ 0.85
PTPRS-206ENST00000588552 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
PTPRS-206ENST00000588552 KIF3BO15066 747 aa20.33■□□□□ 0.84
PTPRS-206ENST00000588552 RSPH4AQ5TD94 716 aa20.32■□□□□ 0.84
PTPRS-206ENST00000588552 LAS1LQ9Y4W2 734 aaKnown RBP20.32■□□□□ 0.84
PTPRS-206ENST00000588552 SPAG9O60271 1321 aaKnown RBP20.31■□□□□ 0.84
PTPRS-206ENST00000588552 U2SURPO15042 1029 aaKnown RBP20.3■□□□□ 0.84
PTPRS-206ENST00000588552 STK26Q9P289 416 aa20.3■□□□□ 0.84
PTPRS-206ENST00000588552 SUPT16HQ9Y5B9 1047 aaKnown RBP20.29■□□□□ 0.84
PTPRS-206ENST00000588552 GAPVD1Q14C86 1478 aa20.29■□□□□ 0.84
PTPRS-206ENST00000588552 PTPRGP23470 1445 aa20.27■□□□□ 0.84
PTPRS-206ENST00000588552 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
PTPRS-206ENST00000588552 FTSJ3Q8IY81 847 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms