RNA–Protein interactions for RNA: ENST00000586373.1

LINC01028-201, Transcript of long intergenic non-protein coding RNA 1028, humanhuman

TSL 1 (best) BASIC

Gene LINC01028, Length 1,045 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01028-201ENST00000586373 CLCN6P51797 869 aa15.21■□□□□ 0.03
LINC01028-201ENST00000586373 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
LINC01028-201ENST00000586373 PHF12Q96QT6 1004 aa15.18■□□□□ 0.02
LINC01028-201ENST00000586373 DCBLD2Q96PD2 775 aa15.17■□□□□ 0.02
LINC01028-201ENST00000586373 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
LINC01028-201ENST00000586373 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
LINC01028-201ENST00000586373 ERCC6Q03468 1493 aa15.08■□□□□ 0.01
LINC01028-201ENST00000586373 PAK3O75914 559 aaPredicted RBP15.08■□□□□ 0
LINC01028-201ENST00000586373 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
LINC01028-201ENST00000586373 SHROOM4Q9ULL8 1493 aa14.97□□□□□ -0.01
LINC01028-201ENST00000586373 TSPYL2Q9H2G4 693 aaPredicted RBP14.97□□□□□ -0.01
LINC01028-201ENST00000586373 MS4A3Q96HJ5 214 aa14.96□□□□□ -0.01
LINC01028-201ENST00000586373 POTEB2H3BUK9 544 aa14.95□□□□□ -0.02
LINC01028-201ENST00000586373 ILDR1Q86SU0 546 aaPredicted RBP14.92□□□□□ -0.02
LINC01028-201ENST00000586373 MIER1Q8N108 512 aa14.91□□□□□ -0.02
LINC01028-201ENST00000586373 CCDC61Q9Y6R9 512 aa14.89□□□□□ -0.03
LINC01028-201ENST00000586373 OTUD5Q96G74 571 aa14.85□□□□□ -0.03
LINC01028-201ENST00000586373 ATMINO43313 823 aaPredicted RBP14.83□□□□□ -0.04
LINC01028-201ENST00000586373 ASTLQ6HA08 431 aaPredicted RBP14.83□□□□□ -0.04
LINC01028-201ENST00000586373 RASEFQ8IZ41 740 aa14.83□□□□□ -0.04
LINC01028-201ENST00000586373 KIF12Q96FN5 646 aa14.81□□□□□ -0.04
LINC01028-201ENST00000586373 TRPC6Q9Y210 931 aa14.79□□□□□ -0.04
LINC01028-201ENST00000586373 FKBP8Q14318 412 aa14.78□□□□□ -0.04
LINC01028-201ENST00000586373 MAP3K13O43283 966 aa14.74□□□□□ -0.05
LINC01028-201ENST00000586373 ATN1P54259 1190 aaPredicted RBP14.74□□□□□ -0.05
LINC01028-201ENST00000586373 PLCD3Q8N3E9 789 aa14.74□□□□□ -0.05
LINC01028-201ENST00000586373 METRNQ9UJH8 293 aa14.74□□□□□ -0.05
LINC01028-201ENST00000586373 PLEKHG5O94827 1062 aa14.73□□□□□ -0.05
LINC01028-201ENST00000586373 POTEJP0CG39 1038 aa14.73□□□□□ -0.05
LINC01028-201ENST00000586373 SLC39A7Q92504 469 aa14.68□□□□□ -0.06
LINC01028-201ENST00000586373 C7P10643 843 aa14.67□□□□□ -0.06
LINC01028-201ENST00000586373 NUBP1P53384 320 aa14.67□□□□□ -0.06
LINC01028-201ENST00000586373 BMP2KQ9NSY1 1161 aaPredicted RBP14.67□□□□□ -0.06
LINC01028-201ENST00000586373 POTEFA5A3E0 1075 aa14.63□□□□□ -0.07
LINC01028-201ENST00000586373 THOC2Q8NI27 1593 aaKnown RBP14.62□□□□□ -0.07
LINC01028-201ENST00000586373 MYO15BQ96JP2 1530 aa14.6□□□□□ -0.07
LINC01028-201ENST00000586373 TIE1P35590 1138 aa14.57□□□□□ -0.08
LINC01028-201ENST00000586373 SCRIBQ14160 1630 aa14.56□□□□□ -0.08
LINC01028-201ENST00000586373 RIMBP3CA6NJZ7 1639 aa14.55□□□□□ -0.08
LINC01028-201ENST00000586373 RIMBP3BA6NNM3 1639 aa14.55□□□□□ -0.08
LINC01028-201ENST00000586373 RIMBP3Q9UFD9 1639 aa14.55□□□□□ -0.08
LINC01028-201ENST00000586373 TTLL13PA6NNM8 815 aa14.54□□□□□ -0.08
LINC01028-201ENST00000586373 NESP48681 1621 aa14.53□□□□□ -0.08
LINC01028-201ENST00000586373 BAZ1AQ9NRL2 1556 aaPredicted RBP14.53□□□□□ -0.08
LINC01028-201ENST00000586373 PCDHB13Q9Y5F0 798 aa14.53□□□□□ -0.08
LINC01028-201ENST00000586373 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.09
LINC01028-201ENST00000586373 COLQQ9Y215 455 aaPredicted RBP14.5□□□□□ -0.09
LINC01028-201ENST00000586373 IFNL1Q8IU54 200 aa14.49□□□□□ -0.09
LINC01028-201ENST00000586373 SGIP1Q9BQI5 828 aa14.47□□□□□ -0.09
LINC01028-201ENST00000586373 SMARCA2P51531 1590 aa14.45□□□□□ -0.1
LINC01028-201ENST00000586373 FAM212AQ96EL1 285 aa14.44□□□□□ -0.1
LINC01028-201ENST00000586373 TRIM35Q9UPQ4 493 aa14.44□□□□□ -0.1
LINC01028-201ENST00000586373 MAMSTRQ6ZN01 415 aa14.42□□□□□ -0.1
LINC01028-201ENST00000586373 POTEMA6NI47 508 aa14.41□□□□□ -0.1
LINC01028-201ENST00000586373 DCAF8Q5TAQ9 597 aa14.4□□□□□ -0.1
LINC01028-201ENST00000586373 PLSCR2Q9NRY7 297 aa14.4□□□□□ -0.1
LINC01028-201ENST00000586373 POTEGQ6S5H5 508 aa14.39□□□□□ -0.11
LINC01028-201ENST00000586373 LCE2DQ5TA82 110 aaPredicted RBP14.38□□□□□ -0.11
LINC01028-201ENST00000586373 PYGBP11216 843 aa14.37□□□□□ -0.11
LINC01028-201ENST00000586373 SCUBE2Q9NQ36 999 aa14.37□□□□□ -0.11
LINC01028-201ENST00000586373 SEC24BO95487 1268 aa14.36□□□□□ -0.11
LINC01028-201ENST00000586373 TMEM106CQ9BVX2 250 aa14.36□□□□□ -0.11
LINC01028-201ENST00000586373 FBXO3Q9UK99 471 aa14.36□□□□□ -0.11
LINC01028-201ENST00000586373 CYB5RLQ6IPT4 315 aa14.35□□□□□ -0.11
LINC01028-201ENST00000586373 ARHGEF11O15085 1522 aa14.34□□□□□ -0.11
LINC01028-201ENST00000586373 FAM163AQ96GL9 167 aaPredicted RBP14.33□□□□□ -0.12
LINC01028-201ENST00000586373 IER5LQ5T953 404 aa14.31□□□□□ -0.12
LINC01028-201ENST00000586373 PCDHB8Q9UN66 801 aa14.31□□□□□ -0.12
LINC01028-201ENST00000586373 VASPP50552 380 aaPredicted RBP14.29□□□□□ -0.12
LINC01028-201ENST00000586373 KIF21AQ7Z4S6 1674 aa14.29□□□□□ -0.12
LINC01028-201ENST00000586373 KLHL34Q8N239 644 aa14.26□□□□□ -0.13
LINC01028-201ENST00000586373 IRX5P78411 483 aaPredicted RBP14.23□□□□□ -0.13
LINC01028-201ENST00000586373 NCAPD3P42695 1498 aa14.18□□□□□ -0.14
LINC01028-201ENST00000586373 PLCG2P16885 1265 aa14.18□□□□□ -0.14
LINC01028-201ENST00000586373 GSE1Q14687 1217 aa14.13□□□□□ -0.15
LINC01028-201ENST00000586373 SLAIN1Q8ND83 568 aa14.13□□□□□ -0.15
LINC01028-201ENST00000586373 OCEL1Q9H607 264 aa14.12□□□□□ -0.15
LINC01028-201ENST00000586373 IFNLR1Q8IU57 520 aaPredicted RBP14.11□□□□□ -0.15
LINC01028-201ENST00000586373 LAMC3Q9Y6N6 1575 aa14.11□□□□□ -0.15
LINC01028-201ENST00000586373 ARAP1Q96P48 1450 aa14.11□□□□□ -0.15
LINC01028-201ENST00000586373 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
LINC01028-201ENST00000586373 MRC2Q9UBG0 1479 aa14.07□□□□□ -0.16
LINC01028-201ENST00000586373 CHRM1P11229 460 aaPredicted RBP14.07□□□□□ -0.16
LINC01028-201ENST00000586373 WDR62O43379 1518 aa14.06□□□□□ -0.16
LINC01028-201ENST00000586373 PCDH10Q9P2E7 1040 aa14.06□□□□□ -0.16
LINC01028-201ENST00000586373 LMTK3Q96Q04 1460 aa14.06□□□□□ -0.16
LINC01028-201ENST00000586373 ZNF467Q7Z7K2 595 aaPredicted RBP14.04□□□□□ -0.16
LINC01028-201ENST00000586373 ST18O60284 1047 aa14.02□□□□□ -0.17
LINC01028-201ENST00000586373 PDCD7Q8N8D1 485 aaKnown RBP14.02□□□□□ -0.17
LINC01028-201ENST00000586373 PSEN1P49768 467 aa14.01□□□□□ -0.17
LINC01028-201ENST00000586373 SPOCK2Q92563 424 aa13.99□□□□□ -0.17
LINC01028-201ENST00000586373 ATAD2BQ9ULI0 1458 aa13.99□□□□□ -0.17
LINC01028-201ENST00000586373 SOCS7O14512 581 aa13.98□□□□□ -0.17
LINC01028-201ENST00000586373 CIZ1Q9ULV3 898 aaPredicted RBP13.97□□□□□ -0.17
LINC01028-201ENST00000586373 HMGXB3Q12766 1538 aa13.96□□□□□ -0.17
LINC01028-201ENST00000586373 MKRN3Q13064 507 aaKnown RBP13.94□□□□□ -0.18
LINC01028-201ENST00000586373 CDAN1Q8IWY9 1227 aa13.93□□□□□ -0.18
LINC01028-201ENST00000586373 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.93□□□□□ -0.18
LINC01028-201ENST00000586373 DCAF1Q9Y4B6 1507 aa13.93□□□□□ -0.18
LINC01028-201ENST00000586373 FBXO41Q8TF61 875 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 228.7 ms