RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 SUPT5HO00267 1087 aaKnown RBP32.86■■■□□ 2.85
TOP3A-220ENST00000585031 ABCC10Q5T3U5 1492 aa32.85■■■□□ 2.85
TOP3A-220ENST00000585031 KDM4FA0A1W2PPD8 638 aa32.84■■■□□ 2.85
TOP3A-220ENST00000585031 RUSC2Q8N2Y8 1516 aa32.77■■■□□ 2.84
TOP3A-220ENST00000585031 NPM1P06748 294 aaKnown RBP eCLIP32.76■■■□□ 2.83
TOP3A-220ENST00000585031 DIP2BQ9P265 1576 aa32.75■■■□□ 2.83
TOP3A-220ENST00000585031 ADCY10Q96PN6 1610 aa32.74■■■□□ 2.83
TOP3A-220ENST00000585031 MAPKBP1O60336 1514 aa32.73■■■□□ 2.83
TOP3A-220ENST00000585031 ILDR1Q86SU0 546 aaPredicted RBP32.7■■■□□ 2.83
TOP3A-220ENST00000585031 TSPOAP1O95153 1857 aa32.63■■■□□ 2.81
TOP3A-220ENST00000585031 KDM6BO15054 1643 aa32.6■■■□□ 2.81
TOP3A-220ENST00000585031 KIAA0586Q9BVV6 1533 aa32.5■■■□□ 2.79
TOP3A-220ENST00000585031 IGF1RP08069 1367 aa32.45■■■□□ 2.79
TOP3A-220ENST00000585031 PPRC1Q5VV67 1664 aaKnown RBP32.35■■■□□ 2.77
TOP3A-220ENST00000585031 PTPRGP23470 1445 aa32.33■■■□□ 2.77
TOP3A-220ENST00000585031 CUL7Q14999 1698 aa32.32■■■□□ 2.76
TOP3A-220ENST00000585031 TTBK1Q5TCY1 1321 aaPredicted RBP32.31■■■□□ 2.76
TOP3A-220ENST00000585031 ABCC2Q92887 1545 aa32.26■■■□□ 2.75
TOP3A-220ENST00000585031 KIF27Q86VH2 1401 aa32.26■■■□□ 2.75
TOP3A-220ENST00000585031 ASXL2Q76L83 1435 aa32.24■■■□□ 2.75
TOP3A-220ENST00000585031 GLI2P10070 1586 aa32.21■■■□□ 2.75
TOP3A-220ENST00000585031 ADGRL1O94910 1474 aa32.2■■■□□ 2.75
TOP3A-220ENST00000585031 COL17A1Q9UMD9 1497 aaPredicted RBP32.2■■■□□ 2.75
TOP3A-220ENST00000585031 TNIKQ9UKE5 1360 aa32.19■■■□□ 2.74
TOP3A-220ENST00000585031 CARMIL1Q5VZK9 1371 aa32.17■■■□□ 2.74
TOP3A-220ENST00000585031 PLB1Q6P1J6 1458 aa32.16■■■□□ 2.74
TOP3A-220ENST00000585031 CARMIL2Q6F5E8 1435 aa32.12■■■□□ 2.73
TOP3A-220ENST00000585031 UHRF1BP1LA0JNW5 1464 aa32.11■■■□□ 2.73
TOP3A-220ENST00000585031 IQGAP2Q13576 1575 aa32.09■■■□□ 2.73
TOP3A-220ENST00000585031 DISP1Q96F81 1524 aa32.07■■■□□ 2.72
TOP3A-220ENST00000585031 UACAQ9BZF9 1416 aa32.06■■■□□ 2.72
TOP3A-220ENST00000585031 MAP3K4Q9Y6R4 1608 aa32.05■■■□□ 2.72
TOP3A-220ENST00000585031 EPRSP07814 1512 aaKnown RBP32.05■■■□□ 2.72
TOP3A-220ENST00000585031 KDM5BQ9UGL1 1544 aa32■■■□□ 2.71
TOP3A-220ENST00000585031 HECW2Q9P2P5 1572 aa32■■■□□ 2.71
TOP3A-220ENST00000585031 ZCCHC11Q5TAX3 1644 aaKnown RBP31.97■■■□□ 2.71
TOP3A-220ENST00000585031 TEX14Q8IWB6 1497 aa31.89■■■□□ 2.7
TOP3A-220ENST00000585031 UGGT2Q9NYU1 1516 aa31.88■■■□□ 2.69
TOP3A-220ENST00000585031 KIAA0556O60303 1618 aa31.84■■■□□ 2.69
TOP3A-220ENST00000585031 WDR7Q9Y4E6 1490 aa31.78■■■□□ 2.68
TOP3A-220ENST00000585031 RAPGEF2Q9Y4G8 1499 aa31.77■■■□□ 2.68
TOP3A-220ENST00000585031 FBXO41Q8TF61 875 aa31.76■■■□□ 2.67
TOP3A-220ENST00000585031 CD109Q6YHK3 1445 aa31.67■■■□□ 2.66
TOP3A-220ENST00000585031 MAGI3Q5TCQ9 1506 aa31.67■■■□□ 2.66
TOP3A-220ENST00000585031 CFAP43Q8NDM7 1665 aa31.67■■■□□ 2.66
TOP3A-220ENST00000585031 KCNH8Q96L42 1107 aa31.65■■■□□ 2.66
TOP3A-220ENST00000585031 KIF21BO75037 1637 aa31.62■■■□□ 2.65
TOP3A-220ENST00000585031 ABCA8O94911 1581 aa31.62■■■□□ 2.65
TOP3A-220ENST00000585031 CTTNBP2Q8WZ74 1663 aa31.59■■■□□ 2.65
TOP3A-220ENST00000585031 ARAP3Q8WWN8 1544 aa31.46■■■□□ 2.63
TOP3A-220ENST00000585031 GOLGA3Q08378 1498 aa31.46■■■□□ 2.63
TOP3A-220ENST00000585031 ARID3CA6NKF2 412 aa31.41■■■□□ 2.62
TOP3A-220ENST00000585031 ADAMTSL3P82987 1691 aa31.41■■■□□ 2.62
TOP3A-220ENST00000585031 PTPRMP28827 1452 aa31.39■■■□□ 2.62
TOP3A-220ENST00000585031 ATP10BO94823 1461 aa31.37■■■□□ 2.61
TOP3A-220ENST00000585031 RAPGEF3O95398 923 aa31.32■■■□□ 2.6
TOP3A-220ENST00000585031 PRXQ9BXM0 1461 aa31.32■■■□□ 2.6
TOP3A-220ENST00000585031 PHLDB1Q86UU1 1377 aa31.31■■■□□ 2.6
TOP3A-220ENST00000585031 ABCA9Q8IUA7 1624 aa31.31■■■□□ 2.6
TOP3A-220ENST00000585031 P3H3Q8IVL6 736 aa31.3■■■□□ 2.6
TOP3A-220ENST00000585031 BCORL1Q5H9F3 1711 aa31.25■■■□□ 2.59
TOP3A-220ENST00000585031 FRMPD1Q5SYB0 1578 aa31.25■■■□□ 2.59
TOP3A-220ENST00000585031 MADDQ8WXG6 1647 aa31.22■■■□□ 2.59
TOP3A-220ENST00000585031 LMTK3Q96Q04 1460 aa31.18■■■□□ 2.58
TOP3A-220ENST00000585031 PCF11O94913 1555 aaKnown RBP31.17■■■□□ 2.58
TOP3A-220ENST00000585031 NEO1Q92859 1461 aa31.16■■■□□ 2.58
TOP3A-220ENST00000585031 ARID4BQ4LE39 1312 aaPredicted RBP31.12■■■□□ 2.57
TOP3A-220ENST00000585031 SAMD9Q5K651 1589 aa31.11■■■□□ 2.57
TOP3A-220ENST00000585031 RAPGEF6Q8TEU7 1601 aa31.11■■■□□ 2.57
TOP3A-220ENST00000585031 FAM9AQ8IZU1 332 aaPredicted RBP31.09■■■□□ 2.57
TOP3A-220ENST00000585031 RIMS1Q86UR5 1692 aaKnown RBP31.09■■■□□ 2.57
TOP3A-220ENST00000585031 RICTORQ6R327 1708 aa31.04■■■□□ 2.56
TOP3A-220ENST00000585031 HSPA2P54652 639 aa31.04■■■□□ 2.56
TOP3A-220ENST00000585031 SIGLEC1Q9BZZ2 1709 aa31.04■■■□□ 2.56
TOP3A-220ENST00000585031 NUP153P49790 1475 aaKnown RBP31.03■■■□□ 2.56
TOP3A-220ENST00000585031 ARHGEF40Q8TER5 1519 aa31.03■■■□□ 2.56
TOP3A-220ENST00000585031 CERKQ8TCT0 537 aa31.02■■■□□ 2.56
TOP3A-220ENST00000585031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.01■■■□□ 2.55
TOP3A-220ENST00000585031 HNRNPUL2Q1KMD3 747 aaKnown RBP31.01■■■□□ 2.55
TOP3A-220ENST00000585031 DENND4BO75064 1496 aaPredicted RBP30.95■■■□□ 2.55
TOP3A-220ENST00000585031 AKNAQ7Z591 1439 aa30.93■■■□□ 2.54
TOP3A-220ENST00000585031 PLPPR3Q6T4P5 718 aa30.93■■■□□ 2.54
TOP3A-220ENST00000585031 FHOD3Q2V2M9 1422 aa30.92■■■□□ 2.54
TOP3A-220ENST00000585031 YEATS2Q9ULM3 1422 aa30.89■■■□□ 2.53
TOP3A-220ENST00000585031 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.88■■■□□ 2.53
TOP3A-220ENST00000585031 RANGAP1P46060 587 aaPredicted RBP30.87■■■□□ 2.53
TOP3A-220ENST00000585031 CSRNP3Q8WYN3 585 aa30.87■■■□□ 2.53
TOP3A-220ENST00000585031 FANCAO15360 1455 aa30.87■■■□□ 2.53
TOP3A-220ENST00000585031 ILDR2Q71H61 639 aa30.86■■■□□ 2.53
TOP3A-220ENST00000585031 TTC37Q6PGP7 1564 aa30.86■■■□□ 2.53
TOP3A-220ENST00000585031 ZMYM4Q5VZL5 1548 aa30.84■■■□□ 2.53
TOP3A-220ENST00000585031 POGZQ7Z3K3 1410 aa30.83■■■□□ 2.53
TOP3A-220ENST00000585031 PLEKHD1A6NEE1 506 aa30.83■■■□□ 2.53
TOP3A-220ENST00000585031 SOCS7O14512 581 aa30.81■■■□□ 2.52
TOP3A-220ENST00000585031 ZFYVE16Q7Z3T8 1539 aa30.81■■■□□ 2.52
TOP3A-220ENST00000585031 CFAP74Q9C0B2 1584 aa30.8■■■□□ 2.52
TOP3A-220ENST00000585031 MLECQ14165 292 aa30.79■■■□□ 2.52
TOP3A-220ENST00000585031 FER1L4A9Z1Z3 1794 aa30.79■■■□□ 2.52
TOP3A-220ENST00000585031 HECW1Q76N89 1606 aa30.78■■■□□ 2.52
TOP3A-220ENST00000585031 EFCAB5A4FU69 1503 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms