RNA–Protein interactions for RNA: ENST00000584601.5

ERBB2-219, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-219ENST00000584601 RRP7BPQ9NSQ0 103 aa16.53■□□□□ 0.24
ERBB2-219ENST00000584601 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
ERBB2-219ENST00000584601 NBR1Q14596 966 aa16.51■□□□□ 0.23
ERBB2-219ENST00000584601 CCDC136Q96JN2 1154 aa16.5■□□□□ 0.23
ERBB2-219ENST00000584601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
ERBB2-219ENST00000584601 MRS2Q9HD23 443 aa16.48■□□□□ 0.23
ERBB2-219ENST00000584601 PLEKHD1A6NEE1 506 aa16.47■□□□□ 0.23
ERBB2-219ENST00000584601 ZBTB47Q9UFB7 747 aaPredicted RBP16.47■□□□□ 0.23
ERBB2-219ENST00000584601 FHAD1B1AJZ9 1412 aa16.47■□□□□ 0.23
ERBB2-219ENST00000584601 CHGAP10645 457 aaKnown RBP16.46■□□□□ 0.23
ERBB2-219ENST00000584601 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
ERBB2-219ENST00000584601 SMARCA4P51532 1647 aa16.43■□□□□ 0.22
ERBB2-219ENST00000584601 CANXP27824 592 aaKnown RBP16.42■□□□□ 0.22
ERBB2-219ENST00000584601 CCNB3Q8WWL7 1395 aa16.41■□□□□ 0.22
ERBB2-219ENST00000584601 ERCC6Q03468 1493 aa16.41■□□□□ 0.22
ERBB2-219ENST00000584601 NEFMP07197 916 aa16.41■□□□□ 0.22
ERBB2-219ENST00000584601 EIF4G2P78344 907 aaKnown RBP eCLIP16.41■□□□□ 0.22
ERBB2-219ENST00000584601 EIF5BO60841 1220 aaKnown RBP16.41■□□□□ 0.22
ERBB2-219ENST00000584601 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
ERBB2-219ENST00000584601 ESF1Q9H501 851 aaKnown RBP16.4■□□□□ 0.22
ERBB2-219ENST00000584601 CFDP1Q9UEE9 299 aaPredicted RBP16.4■□□□□ 0.22
ERBB2-219ENST00000584601 TMC1Q8TDI8 760 aa16.39■□□□□ 0.22
ERBB2-219ENST00000584601 ATAD2BQ9ULI0 1458 aa16.39■□□□□ 0.21
ERBB2-219ENST00000584601 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
ERBB2-219ENST00000584601 KCNH8Q96L42 1107 aa16.36■□□□□ 0.21
ERBB2-219ENST00000584601 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
ERBB2-219ENST00000584601 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
ERBB2-219ENST00000584601 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
ERBB2-219ENST00000584601 SIN3AQ96ST3 1273 aa16.31■□□□□ 0.2
ERBB2-219ENST00000584601 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
ERBB2-219ENST00000584601 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
ERBB2-219ENST00000584601 BCL11AQ9H165 835 aa16.26■□□□□ 0.19
ERBB2-219ENST00000584601 PPP4R2Q9NY27 417 aa16.25■□□□□ 0.19
ERBB2-219ENST00000584601 RBM19Q9Y4C8 960 aaKnown RBP16.25■□□□□ 0.19
ERBB2-219ENST00000584601 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
ERBB2-219ENST00000584601 TSHZ2Q9NRE2 1034 aa16.24■□□□□ 0.19
ERBB2-219ENST00000584601 ARHGAP35Q9NRY4 1499 aa16.24■□□□□ 0.19
ERBB2-219ENST00000584601 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
ERBB2-219ENST00000584601 SLC24A1O60721 1099 aa16.22■□□□□ 0.19
ERBB2-219ENST00000584601 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
ERBB2-219ENST00000584601 SETD5Q9C0A6 1442 aa16.21■□□□□ 0.19
ERBB2-219ENST00000584601 UPF2Q9HAU5 1272 aaKnown RBP16.21■□□□□ 0.19
ERBB2-219ENST00000584601 FMN1Q68DA7 1419 aa16.21■□□□□ 0.19
ERBB2-219ENST00000584601 WDR43Q15061 677 aaKnown RBP eCLIP16.21■□□□□ 0.181e-5■■■■□ 24.6
ERBB2-219ENST00000584601 TIMELESSQ9UNS1 1208 aa16.2■□□□□ 0.18
ERBB2-219ENST00000584601 CCER2I3L3R5 266 aa16.19■□□□□ 0.18
ERBB2-219ENST00000584601 RUSC2Q8N2Y8 1516 aa16.19■□□□□ 0.18
ERBB2-219ENST00000584601 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.18■□□□□ 0.18
ERBB2-219ENST00000584601 B4GALNT3Q6L9W6 998 aa16.15■□□□□ 0.18
ERBB2-219ENST00000584601 CARD11Q9BXL7 1154 aa16.15■□□□□ 0.18
ERBB2-219ENST00000584601 NOP58Q9Y2X3 529 aaKnown RBP16.15■□□□□ 0.18
ERBB2-219ENST00000584601 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
ERBB2-219ENST00000584601 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
ERBB2-219ENST00000584601 DDRGK1Q96HY6 314 aa16.12■□□□□ 0.17
ERBB2-219ENST00000584601 CARMIL2Q6F5E8 1435 aa16.12■□□□□ 0.17
ERBB2-219ENST00000584601 RAB3GAP2Q9H2M9 1393 aa16.11■□□□□ 0.17
ERBB2-219ENST00000584601 HSP90AA1P07900 732 aaKnown RBP16.1■□□□□ 0.17
ERBB2-219ENST00000584601 FHOD3Q2V2M9 1422 aa16.1■□□□□ 0.17
ERBB2-219ENST00000584601 ANP32BQ92688 251 aaKnown RBP16.1■□□□□ 0.17
ERBB2-219ENST00000584601 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
ERBB2-219ENST00000584601 GLIPR1L2Q4G1C9 344 aa16.08■□□□□ 0.17
ERBB2-219ENST00000584601 CDCA8Q53HL2 280 aa16.08■□□□□ 0.17
ERBB2-219ENST00000584601 ARXQ96QS3 562 aa16.08■□□□□ 0.16
ERBB2-219ENST00000584601 PPM1GO15355 546 aaPredicted RBP16.07■□□□□ 0.16
ERBB2-219ENST00000584601 DEKP35659 375 aaKnown RBP16.05■□□□□ 0.16
ERBB2-219ENST00000584601 LAS1LQ9Y4W2 734 aaKnown RBP16.04■□□□□ 0.16
ERBB2-219ENST00000584601 KNSTRNQ9Y448 316 aa16.03■□□□□ 0.16
ERBB2-219ENST00000584601 PPP1R15AO75807 674 aaPredicted RBP16.02■□□□□ 0.15
ERBB2-219ENST00000584601 ERICH6BQ5W0A0 696 aa16.02■□□□□ 0.15
ERBB2-219ENST00000584601 NCAPD3P42695 1498 aa16.01■□□□□ 0.15
ERBB2-219ENST00000584601 DCAF11Q8TEB1 546 aa16■□□□□ 0.15
ERBB2-219ENST00000584601 RTN4Q9NQC3 1192 aaKnown RBP16■□□□□ 0.15
ERBB2-219ENST00000584601 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
ERBB2-219ENST00000584601 PKD2Q13563 968 aa15.98■□□□□ 0.15
ERBB2-219ENST00000584601 BECN1Q14457 450 aa15.98■□□□□ 0.15
ERBB2-219ENST00000584601 MPHOSPH9Q99550 1183 aa15.97■□□□□ 0.15
ERBB2-219ENST00000584601 DHX57Q6P158 1386 aaKnown RBP15.97■□□□□ 0.15
ERBB2-219ENST00000584601 FGD5Q6ZNL6 1462 aa15.97■□□□□ 0.15
ERBB2-219ENST00000584601 HSPA5P11021 654 aaKnown RBP15.96■□□□□ 0.15
ERBB2-219ENST00000584601 FOXD1Q16676 465 aa15.96■□□□□ 0.14
ERBB2-219ENST00000584601 IGF1RP08069 1367 aa15.95■□□□□ 0.14
ERBB2-219ENST00000584601 KANK1Q14678 1352 aa15.95■□□□□ 0.14
ERBB2-219ENST00000584601 CCDC18Q5T9S5 1454 aa15.94■□□□□ 0.14
ERBB2-219ENST00000584601 ANKRD30AQ9BXX3 1397 aa15.94■□□□□ 0.14
ERBB2-219ENST00000584601 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
ERBB2-219ENST00000584601 TMF1P82094 1093 aa15.91■□□□□ 0.14
ERBB2-219ENST00000584601 NUP155O75694 1391 aa15.9■□□□□ 0.14
ERBB2-219ENST00000584601 JPH4Q96JJ6 628 aa15.9■□□□□ 0.14
ERBB2-219ENST00000584601 EFCAB2Q5VUJ9 269 aa15.88■□□□□ 0.13
ERBB2-219ENST00000584601 ARID4BQ4LE39 1312 aaPredicted RBP15.88■□□□□ 0.13
ERBB2-219ENST00000584601 RGS3P49796 1198 aa15.88■□□□□ 0.13
ERBB2-219ENST00000584601 GAPVD1Q14C86 1478 aa15.87■□□□□ 0.13
ERBB2-219ENST00000584601 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
ERBB2-219ENST00000584601 CC2D1BQ5T0F9 858 aaKnown RBP15.87■□□□□ 0.13
ERBB2-219ENST00000584601 KIF21BO75037 1637 aa15.84■□□□□ 0.13
ERBB2-219ENST00000584601 POGKQ9P215 609 aa15.84■□□□□ 0.13
ERBB2-219ENST00000584601 TRIM44Q96DX7 344 aaPredicted RBP15.83■□□□□ 0.12
ERBB2-219ENST00000584601 SYNJ1O43426 1573 aa15.83■□□□□ 0.12
ERBB2-219ENST00000584601 RSPH4AQ5TD94 716 aa15.83■□□□□ 0.12
ERBB2-219ENST00000584601 L3MBTL2Q969R5 705 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms