RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 HECW2Q9P2P5 1572 aa11.93□□□□□ -0.5
CTC1-212ENST00000584439 SHROOM2Q13796 1616 aa11.91□□□□□ -0.5
CTC1-212ENST00000584439 DIP2BQ9P265 1576 aa11.9□□□□□ -0.5
CTC1-212ENST00000584439 CUX1P39880 1505 aa11.88□□□□□ -0.51
CTC1-212ENST00000584439 FAM69CQ0P6D2 419 aa11.88□□□□□ -0.51
CTC1-212ENST00000584439 PIAS4Q8N2W9 510 aaPredicted RBP11.87□□□□□ -0.51
CTC1-212ENST00000584439 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
CTC1-212ENST00000584439 ABCC10Q5T3U5 1492 aa11.87□□□□□ -0.51
CTC1-212ENST00000584439 ABCA5Q8WWZ7 1642 aa11.86□□□□□ -0.51
CTC1-212ENST00000584439 ADGRL1O94910 1474 aa11.84□□□□□ -0.51
CTC1-212ENST00000584439 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
CTC1-212ENST00000584439 ADCY10Q96PN6 1610 aa11.81□□□□□ -0.52
CTC1-212ENST00000584439 ADAMTS12P58397 1594 aa11.8□□□□□ -0.52
CTC1-212ENST00000584439 NUP160Q12769 1436 aa11.8□□□□□ -0.52
CTC1-212ENST00000584439 ADRA2BP18089 450 aa11.8□□□□□ -0.52
CTC1-212ENST00000584439 PPRC1Q5VV67 1664 aaKnown RBP11.8□□□□□ -0.52
CTC1-212ENST00000584439 MAPKBP1O60336 1514 aa11.8□□□□□ -0.52
CTC1-212ENST00000584439 FBXO41Q8TF61 875 aa11.77□□□□□ -0.53
CTC1-212ENST00000584439 PRG4Q92954 1404 aaPredicted RBP11.75□□□□□ -0.53
CTC1-212ENST00000584439 ABCA10Q8WWZ4 1543 aa11.74□□□□□ -0.53
CTC1-212ENST00000584439 LMTK3Q96Q04 1460 aa11.69□□□□□ -0.54
CTC1-212ENST00000584439 COL17A1Q9UMD9 1497 aaPredicted RBP11.69□□□□□ -0.54
CTC1-212ENST00000584439 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
CTC1-212ENST00000584439 NPM1P06748 294 aaKnown RBP eCLIP11.67□□□□□ -0.54
CTC1-212ENST00000584439 ILDR2Q71H61 639 aa11.67□□□□□ -0.54
CTC1-212ENST00000584439 RTN4Q9NQC3 1192 aaKnown RBP11.67□□□□□ -0.54
CTC1-212ENST00000584439 JPH4Q96JJ6 628 aa11.66□□□□□ -0.54
CTC1-212ENST00000584439 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.54
CTC1-212ENST00000584439 FHAD1B1AJZ9 1412 aa11.64□□□□□ -0.55
CTC1-212ENST00000584439 CUL7Q14999 1698 aa11.62□□□□□ -0.55
CTC1-212ENST00000584439 MAP3K4Q9Y6R4 1608 aa11.58□□□□□ -0.56
CTC1-212ENST00000584439 GLI2P10070 1586 aa11.58□□□□□ -0.56
CTC1-212ENST00000584439 SOCS7O14512 581 aa11.57□□□□□ -0.56
CTC1-212ENST00000584439 KIF21BO75037 1637 aa11.57□□□□□ -0.56
CTC1-212ENST00000584439 ERICH3Q5RHP9 1530 aa11.56□□□□□ -0.56
CTC1-212ENST00000584439 TOP2BQ02880 1626 aa11.56□□□□□ -0.56
CTC1-212ENST00000584439 BIVM-ERCC5R4GMW8 1640 aa11.54□□□□□ -0.56
CTC1-212ENST00000584439 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
CTC1-212ENST00000584439 ASXL2Q76L83 1435 aa11.53□□□□□ -0.56
CTC1-212ENST00000584439 ABCC2Q92887 1545 aa11.52□□□□□ -0.57
CTC1-212ENST00000584439 WRNQ14191 1432 aaPredicted RBP eCLIP11.52□□□□□ -0.57
CTC1-212ENST00000584439 TTBK1Q5TCY1 1321 aaPredicted RBP11.51□□□□□ -0.57
CTC1-212ENST00000584439 DISP3Q9P2K9 1392 aa11.5□□□□□ -0.57
CTC1-212ENST00000584439 EPRSP07814 1512 aaKnown RBP11.47□□□□□ -0.57
CTC1-212ENST00000584439 PLB1Q6P1J6 1458 aa11.46□□□□□ -0.57
CTC1-212ENST00000584439 ADAMTSL3P82987 1691 aa11.46□□□□□ -0.58
CTC1-212ENST00000584439 ZCCHC11Q5TAX3 1644 aaKnown RBP11.45□□□□□ -0.58
CTC1-212ENST00000584439 PTPRGP23470 1445 aa11.44□□□□□ -0.58
CTC1-212ENST00000584439 KIAA0586Q9BVV6 1533 aa11.43□□□□□ -0.58
CTC1-212ENST00000584439 PTPRMP28827 1452 aa11.43□□□□□ -0.58
CTC1-212ENST00000584439 TEX14Q8IWB6 1497 aa11.43□□□□□ -0.58
CTC1-212ENST00000584439 PCF11O94913 1555 aaKnown RBP11.42□□□□□ -0.58
CTC1-212ENST00000584439 SPATA31D1Q6ZQQ2 1576 aa11.41□□□□□ -0.58
CTC1-212ENST00000584439 MADDQ8WXG6 1647 aa11.38□□□□□ -0.59
CTC1-212ENST00000584439 CERKQ8TCT0 537 aa11.38□□□□□ -0.59
CTC1-212ENST00000584439 UHRF1BP1LA0JNW5 1464 aa11.38□□□□□ -0.59
CTC1-212ENST00000584439 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
CTC1-212ENST00000584439 CFAP43Q8NDM7 1665 aa11.36□□□□□ -0.59
CTC1-212ENST00000584439 KDM5BQ9UGL1 1544 aa11.36□□□□□ -0.59
CTC1-212ENST00000584439 TNIKQ9UKE5 1360 aa11.36□□□□□ -0.59
CTC1-212ENST00000584439 RIMS1Q86UR5 1692 aaKnown RBP11.36□□□□□ -0.59
CTC1-212ENST00000584439 HSPA2P54652 639 aa11.35□□□□□ -0.59
CTC1-212ENST00000584439 UACAQ9BZF9 1416 aa11.35□□□□□ -0.59
CTC1-212ENST00000584439 DISP1Q96F81 1524 aa11.31□□□□□ -0.6
CTC1-212ENST00000584439 MAGI3Q5TCQ9 1506 aa11.3□□□□□ -0.6
CTC1-212ENST00000584439 WDR7Q9Y4E6 1490 aa11.3□□□□□ -0.6
CTC1-212ENST00000584439 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
CTC1-212ENST00000584439 CD109Q6YHK3 1445 aa11.29□□□□□ -0.6
CTC1-212ENST00000584439 IGF1RP08069 1367 aa11.28□□□□□ -0.6
CTC1-212ENST00000584439 CARMIL2Q6F5E8 1435 aa11.28□□□□□ -0.6
CTC1-212ENST00000584439 SIGLEC1Q9BZZ2 1709 aa11.28□□□□□ -0.6
CTC1-212ENST00000584439 STRCQ7RTU9 1775 aa11.28□□□□□ -0.6
CTC1-212ENST00000584439 KCNH8Q96L42 1107 aa11.26□□□□□ -0.61
CTC1-212ENST00000584439 ARAP3Q8WWN8 1544 aa11.25□□□□□ -0.61
CTC1-212ENST00000584439 FRMPD1Q5SYB0 1578 aa11.24□□□□□ -0.61
CTC1-212ENST00000584439 KIAA0556O60303 1618 aa11.22□□□□□ -0.61
CTC1-212ENST00000584439 RAPGEF3O95398 923 aa11.21□□□□□ -0.61
CTC1-212ENST00000584439 ZBTB22O15209 634 aa11.2□□□□□ -0.62
CTC1-212ENST00000584439 FER1L4A9Z1Z3 1794 aa11.19□□□□□ -0.62
CTC1-212ENST00000584439 ARID4BQ4LE39 1312 aaPredicted RBP11.18□□□□□ -0.62
CTC1-212ENST00000584439 UGGT2Q9NYU1 1516 aa11.17□□□□□ -0.62
CTC1-212ENST00000584439 PREX1Q8TCU6 1659 aa11.17□□□□□ -0.62
CTC1-212ENST00000584439 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
CTC1-212ENST00000584439 RICTORQ6R327 1708 aa11.16□□□□□ -0.62
CTC1-212ENST00000584439 ABCA8O94911 1581 aa11.16□□□□□ -0.62
CTC1-212ENST00000584439 ABCA9Q8IUA7 1624 aa11.14□□□□□ -0.63
CTC1-212ENST00000584439 PPP4R3CPQ6ZMV5 832 aa11.14□□□□□ -0.63
CTC1-212ENST00000584439 KIF27Q86VH2 1401 aa11.14□□□□□ -0.63
CTC1-212ENST00000584439 ARHGEF40Q8TER5 1519 aa11.14□□□□□ -0.63
CTC1-212ENST00000584439 LTBP4Q8N2S1 1624 aa11.11□□□□□ -0.63
CTC1-212ENST00000584439 TTC37Q6PGP7 1564 aa11.11□□□□□ -0.63
CTC1-212ENST00000584439 CTTNBP2Q8WZ74 1663 aa11.11□□□□□ -0.63
CTC1-212ENST00000584439 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
CTC1-212ENST00000584439 YEATS2Q9ULM3 1422 aa11.08□□□□□ -0.64
CTC1-212ENST00000584439 SETD1BQ9UPS6 1966 aaKnown RBP11.07□□□□□ -0.64
CTC1-212ENST00000584439 SUPT5HO00267 1087 aaKnown RBP11.07□□□□□ -0.64
CTC1-212ENST00000584439 NCBP3Q53F19 620 aaKnown RBP11.07□□□□□ -0.64
CTC1-212ENST00000584439 MLECQ14165 292 aa11.06□□□□□ -0.64
CTC1-212ENST00000584439 NEO1Q92859 1461 aa11.06□□□□□ -0.64
CTC1-212ENST00000584439 CEBPAP49715 358 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms