RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
MKS1-212ENST00000583577 MAPKBP1O60336 1514 aa17.27■□□□□ 0.36
MKS1-212ENST00000583577 PRG4Q92954 1404 aaPredicted RBP17.27■□□□□ 0.35
MKS1-212ENST00000583577 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
MKS1-212ENST00000583577 FBXO41Q8TF61 875 aa17.23■□□□□ 0.35
MKS1-212ENST00000583577 ADCY10Q96PN6 1610 aa17.2■□□□□ 0.34
MKS1-212ENST00000583577 JPH4Q96JJ6 628 aa17.18■□□□□ 0.34
MKS1-212ENST00000583577 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
MKS1-212ENST00000583577 SUPT5HO00267 1087 aaKnown RBP17.13■□□□□ 0.33
MKS1-212ENST00000583577 PPRC1Q5VV67 1664 aaKnown RBP17.09■□□□□ 0.33
MKS1-212ENST00000583577 LMTK3Q96Q04 1460 aa17.06■□□□□ 0.32
MKS1-212ENST00000583577 RUSC2Q8N2Y8 1516 aa17.05■□□□□ 0.32
MKS1-212ENST00000583577 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
MKS1-212ENST00000583577 ERICH3Q5RHP9 1530 aa17.03■□□□□ 0.32
MKS1-212ENST00000583577 COL17A1Q9UMD9 1497 aaPredicted RBP16.99■□□□□ 0.31
MKS1-212ENST00000583577 TTBK1Q5TCY1 1321 aaPredicted RBP16.98■□□□□ 0.31
MKS1-212ENST00000583577 TOP2BQ02880 1626 aa16.96■□□□□ 0.31
MKS1-212ENST00000583577 GLI2P10070 1586 aa16.95■□□□□ 0.3
MKS1-212ENST00000583577 ASXL2Q76L83 1435 aa16.93■□□□□ 0.3
MKS1-212ENST00000583577 CUL7Q14999 1698 aa16.92■□□□□ 0.3
MKS1-212ENST00000583577 PLB1Q6P1J6 1458 aa16.91■□□□□ 0.3
MKS1-212ENST00000583577 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
MKS1-212ENST00000583577 SOCS7O14512 581 aa16.89■□□□□ 0.29
MKS1-212ENST00000583577 ABCC2Q92887 1545 aa16.89■□□□□ 0.29
MKS1-212ENST00000583577 PTPRGP23470 1445 aa16.88■□□□□ 0.29
MKS1-212ENST00000583577 ILDR2Q71H61 639 aa16.88■□□□□ 0.29
MKS1-212ENST00000583577 MAP3K4Q9Y6R4 1608 aa16.87■□□□□ 0.29
MKS1-212ENST00000583577 TEX14Q8IWB6 1497 aa16.86■□□□□ 0.29
MKS1-212ENST00000583577 KIAA0586Q9BVV6 1533 aa16.84■□□□□ 0.29
MKS1-212ENST00000583577 DISP3Q9P2K9 1392 aa16.83■□□□□ 0.28
MKS1-212ENST00000583577 EPRSP07814 1512 aaKnown RBP16.82■□□□□ 0.28
MKS1-212ENST00000583577 KIF21BO75037 1637 aa16.81■□□□□ 0.28
MKS1-212ENST00000583577 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.27
MKS1-212ENST00000583577 CARMIL2Q6F5E8 1435 aa16.73■□□□□ 0.27
MKS1-212ENST00000583577 UHRF1BP1LA0JNW5 1464 aa16.73■□□□□ 0.27
MKS1-212ENST00000583577 UACAQ9BZF9 1416 aa16.71■□□□□ 0.27
MKS1-212ENST00000583577 ZCCHC11Q5TAX3 1644 aaKnown RBP16.71■□□□□ 0.27
MKS1-212ENST00000583577 PTPRMP28827 1452 aa16.71■□□□□ 0.27
MKS1-212ENST00000583577 PCF11O94913 1555 aaKnown RBP16.68■□□□□ 0.26
MKS1-212ENST00000583577 KDM5BQ9UGL1 1544 aa16.67■□□□□ 0.26
MKS1-212ENST00000583577 ADAMTSL3P82987 1691 aa16.67■□□□□ 0.26
MKS1-212ENST00000583577 CERKQ8TCT0 537 aa16.67■□□□□ 0.26
MKS1-212ENST00000583577 CFAP43Q8NDM7 1665 aa16.63■□□□□ 0.25
MKS1-212ENST00000583577 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
MKS1-212ENST00000583577 IGF1RP08069 1367 aa16.62■□□□□ 0.25
MKS1-212ENST00000583577 WDR7Q9Y4E6 1490 aa16.61■□□□□ 0.25
MKS1-212ENST00000583577 SPATA31D1Q6ZQQ2 1576 aa16.61■□□□□ 0.25
MKS1-212ENST00000583577 HSPA2P54652 639 aa16.61■□□□□ 0.25
MKS1-212ENST00000583577 MAGI3Q5TCQ9 1506 aa16.6■□□□□ 0.25
MKS1-212ENST00000583577 IQGAP2Q13576 1575 aa16.6■□□□□ 0.25
MKS1-212ENST00000583577 KCNH8Q96L42 1107 aa16.59■□□□□ 0.25
MKS1-212ENST00000583577 MADDQ8WXG6 1647 aa16.59■□□□□ 0.25
MKS1-212ENST00000583577 BCORL1Q5H9F3 1711 aa16.56■□□□□ 0.24
MKS1-212ENST00000583577 DISP1Q96F81 1524 aa16.56■□□□□ 0.24
MKS1-212ENST00000583577 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
MKS1-212ENST00000583577 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
MKS1-212ENST00000583577 RIMS1Q86UR5 1692 aaKnown RBP16.54■□□□□ 0.24
MKS1-212ENST00000583577 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
MKS1-212ENST00000583577 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
MKS1-212ENST00000583577 ARAP3Q8WWN8 1544 aa16.5■□□□□ 0.23
MKS1-212ENST00000583577 KIAA0556O60303 1618 aa16.46■□□□□ 0.23
MKS1-212ENST00000583577 RAPGEF3O95398 923 aa16.45■□□□□ 0.22
MKS1-212ENST00000583577 UGGT2Q9NYU1 1516 aa16.42■□□□□ 0.22
MKS1-212ENST00000583577 FRMPD1Q5SYB0 1578 aa16.35■□□□□ 0.21
MKS1-212ENST00000583577 PHLDB1Q86UU1 1377 aa16.35■□□□□ 0.21
MKS1-212ENST00000583577 ABCA8O94911 1581 aa16.34■□□□□ 0.21
MKS1-212ENST00000583577 ARID3CA6NKF2 412 aa16.34■□□□□ 0.21
MKS1-212ENST00000583577 FER1L4A9Z1Z3 1794 aa16.32■□□□□ 0.2
MKS1-212ENST00000583577 STRCQ7RTU9 1775 aa16.32■□□□□ 0.2
MKS1-212ENST00000583577 ABCA9Q8IUA7 1624 aa16.31■□□□□ 0.2
MKS1-212ENST00000583577 ARHGEF40Q8TER5 1519 aa16.3■□□□□ 0.2
MKS1-212ENST00000583577 MLECQ14165 292 aa16.29■□□□□ 0.2
MKS1-212ENST00000583577 PREX1Q8TCU6 1659 aa16.29■□□□□ 0.2
MKS1-212ENST00000583577 NEO1Q92859 1461 aa16.29■□□□□ 0.2
MKS1-212ENST00000583577 POGZQ7Z3K3 1410 aa16.28■□□□□ 0.2
MKS1-212ENST00000583577 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
MKS1-212ENST00000583577 YEATS2Q9ULM3 1422 aa16.28■□□□□ 0.2
MKS1-212ENST00000583577 SIGLEC1Q9BZZ2 1709 aa16.27■□□□□ 0.19
MKS1-212ENST00000583577 FANCAO15360 1455 aa16.26■□□□□ 0.19
MKS1-212ENST00000583577 RAPGEF2Q9Y4G8 1499 aa16.26■□□□□ 0.19
MKS1-212ENST00000583577 RICTORQ6R327 1708 aa16.25■□□□□ 0.19
MKS1-212ENST00000583577 CTTNBP2Q8WZ74 1663 aa16.25■□□□□ 0.19
MKS1-212ENST00000583577 GOLGA3Q08378 1498 aa16.23■□□□□ 0.19
MKS1-212ENST00000583577 TTC37Q6PGP7 1564 aa16.23■□□□□ 0.19
MKS1-212ENST00000583577 SETD1BQ9UPS6 1966 aaKnown RBP16.22■□□□□ 0.19
MKS1-212ENST00000583577 AKNAQ7Z591 1439 aa16.21■□□□□ 0.19
MKS1-212ENST00000583577 ATP10BO94823 1461 aa16.21■□□□□ 0.19
MKS1-212ENST00000583577 DENND4BO75064 1496 aaPredicted RBP16.2■□□□□ 0.18
MKS1-212ENST00000583577 CEBPAP49715 358 aaPredicted RBP16.19■□□□□ 0.18
MKS1-212ENST00000583577 LTBP4Q8N2S1 1624 aa16.16■□□□□ 0.18
MKS1-212ENST00000583577 ZFYVE16Q7Z3T8 1539 aa16.16■□□□□ 0.18
MKS1-212ENST00000583577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
MKS1-212ENST00000583577 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
MKS1-212ENST00000583577 FAM9AQ8IZU1 332 aaPredicted RBP16.15■□□□□ 0.18
MKS1-212ENST00000583577 PTPRTO14522 1441 aa16.14■□□□□ 0.17
MKS1-212ENST00000583577 FHOD3Q2V2M9 1422 aa16.14■□□□□ 0.17
MKS1-212ENST00000583577 UHRF1BP1Q6BDS2 1440 aa16.14■□□□□ 0.17
MKS1-212ENST00000583577 IQSEC2Q5JU85 1478 aa16.14■□□□□ 0.17
MKS1-212ENST00000583577 EFCAB5A4FU69 1503 aa16.14■□□□□ 0.17
MKS1-212ENST00000583577 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms